>emb|BX119968.5| Mouse DNA sequence from clone RP23-375D12 on chromosome X, complete
             sequence
          Length = 190433

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   ctgattacaaaactatatgtt 242
             |||||||||||||||||||||
Sbjct: 68080 ctgattacaaaactatatgtt 68060



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 222   ctgattacaaaactatatgtt 242
             |||||||||||||||||||||
Sbjct: 67522 ctgattacaaaactatatgtt 67542

>gb|AC132467.3| Mus musculus BAC clone RP23-71E21 from chromosome 14, complete
            sequence
          Length = 191280

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 319  gaatcttgggagaatttctctgaa 342
            ||||||||||||| ||||||||||
Sbjct: 5060 gaatcttgggagattttctctgaa 5037

>gb|AC126440.3| Mus musculus BAC clone RP23-413M14 from chromosome 14, complete
             sequence
          Length = 207346

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 319   gaatcttgggagaatttctctgaa 342
             ||||||||||||| ||||||||||
Sbjct: 52119 gaatcttgggagattttctctgaa 52142

>ref|XM_721008.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00654)
           partial mRNA
          Length = 1881

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 ccctttgctgaatcaaacag 176
           ||||||||||||||||||||
Sbjct: 659 ccctttgctgaatcaaacag 640

>gb|AC100779.2| Homo sapiens chromosome 18, clone RP11-761D8, complete sequence
          Length = 196261

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   ttaatcaataaagttttagt 126
             ||||||||||||||||||||
Sbjct: 72697 ttaatcaataaagttttagt 72716

>gb|AC073862.36| Homo sapiens 12q BAC RP11-243M5 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 71517

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 313   tcagaagaatcttgggagaatttc 336
             ||||||| ||||||||||||||||
Sbjct: 52280 tcagaagcatcttgggagaatttc 52303

>gb|AC078856.13| Homo sapiens 3 BAC RP11-73F12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115534

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    agcaaaatattctttgtact 40
             ||||||||||||||||||||
Sbjct: 95000 agcaaaatattctttgtact 94981

>gb|AC157526.2| Pan troglodytes BAC clone CH251-513A15 from chromosome unknown, complete
              sequence
          Length = 188881

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    caataaagttttagttcccc 131
              ||||||||||||||||||||
Sbjct: 132890 caataaagttttagttcccc 132871

>gb|AC084783.2|AC084783 Homo sapiens chromosome 15 clone RP11-5N19 map 15q21.3, complete sequence
          Length = 166982

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    caataaagttttagttcccc 131
              ||||||||||||||||||||
Sbjct: 137042 caataaagttttagttcccc 137061

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 108     taatcaataaagttttagtt 127
               ||||||||||||||||||||
Sbjct: 2470368 taatcaataaagttttagtt 2470349

>emb|AL672290.16| Mouse DNA sequence from clone RP23-471M13 on chromosome X, complete
            sequence
          Length = 178341

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 218  cattctgattacaaaactatatgt 241
            |||||||||||||||||| |||||
Sbjct: 1001 cattctgattacaaaactttatgt 978


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,576,516
Number of Sequences: 3902068
Number of extensions: 3576516
Number of successful extensions: 66445
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66398
Number of HSP's gapped (non-prelim): 47
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)