ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
2dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
3dbj|AK100158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
4dbj|AK073114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
5dbj|AK071459.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
6dbj|AP004486.1| Lotus japonicus genomic DNA, chromosome 5, clone... 50 0.005
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
8dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
9dbj|AK120954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
10gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 42 1.3
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
13gb|BC094404.1| Xenopus laevis cDNA clone MGC:85029 IMAGE:6326490... 42 1.3
14gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
16emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.3
17gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 5.3
18gb|AC132570.3| Mus musculus BAC clone RP24-531D1 from chromosome... 40 5.3
19emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chro... 40 5.3
20gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosom... 40 5.3
21emb|AL445217.3| Human DNA sequence from clone RP11-335G18 on chr... 40 5.3
22ref|XM_777291.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.3
23emb|AL162253.17| Human DNA sequence from clone RP11-574F11 on ch... 40 5.3
24emb|AL162455.14| Human DNA sequence from clone RP11-62D23 on chr... 40 5.3
25emb|AL157918.1|SPBC21C3 S.pombe chromosome II cosmid c21C3 40 5.3
26gb|AC108169.5| Homo sapiens BAC clone RP11-1236J3 from 4, comple... 40 5.3
27gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
28emb|AL954812.14| Zebrafish DNA sequence from clone DKEY-50G15, c... 40 5.3
29gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
30ref|NM_001022511.1| Schizosaccharomyces pombe 972h- hypothetical... 40 5.3
31gb|AC153525.12| Mus musculus 10 BAC RP23-440I21 (Roswell Park Ca... 40 5.3
32gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete s... 40 5.3
33gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complet... 40 5.3 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Minus

                                                                            
Query: 214      tcaaatgacaacaagacatggatgacgatgtagatgatcacagcaatgacgagtgcaaaa 273
                |||||||||| ||| ||||| |||||||||||||| | ||| || ||||| |||||||||
Sbjct: 10869951 tcaaatgacagcaatacatgaatgacgatgtagataaacacggcgatgacaagtgcaaaa 10869892

                                                                            
Query: 274      atgtacacagatgtcttcaacttcctgcagctgcccgcggcatatgccccaagtaaacca 333
                |||||  |||||||||| ||||||||||||||||| || |||||||||||||| | ||||
Sbjct: 10869891 atgtatgcagatgtcttgaacttcctgcagctgccggctgcatatgccccaaggagacca 10869832

                                                                            
Query: 334      agcaagtccaataccattgctgttttcatggcaaagagagatctcttgtacttgcttatt 393
                |||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||
Sbjct: 10869831 agcaagtctaataccattgctgtcttcatggcaaggagtgatctcttgtacttgcttatt 10869772

                 
Query: 394      g 394
                |
Sbjct: 10869771 g 10869771
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>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0055N24
          Length = 142702

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Minus

                                                                         
Query: 214   tcaaatgacaacaagacatggatgacgatgtagatgatcacagcaatgacgagtgcaaaa 273
             |||||||||| ||| ||||| |||||||||||||| | ||| || ||||| |||||||||
Sbjct: 96317 tcaaatgacagcaatacatgaatgacgatgtagataaacacggcgatgacaagtgcaaaa 96258

                                                                         
Query: 274   atgtacacagatgtcttcaacttcctgcagctgcccgcggcatatgccccaagtaaacca 333
             |||||  |||||||||| ||||||||||||||||| || |||||||||||||| | ||||
Sbjct: 96257 atgtatgcagatgtcttgaacttcctgcagctgccggctgcatatgccccaaggagacca 96198

                                                                         
Query: 334   agcaagtccaataccattgctgttttcatggcaaagagagatctcttgtacttgcttatt 393
             |||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||
Sbjct: 96197 agcaagtctaataccattgctgtcttcatggcaaggagtgatctcttgtacttgcttatt 96138

              
Query: 394   g 394
             |
Sbjct: 96137 g 96137
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>dbj|AK100158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019J01, full
            insert sequence
          Length = 3208

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Minus

                                                                        
Query: 214  tcaaatgacaacaagacatggatgacgatgtagatgatcacagcaatgacgagtgcaaaa 273
            |||||||||| ||| ||||| |||||||||||||| | ||| || ||||| |||||||||
Sbjct: 2887 tcaaatgacagcaatacatgaatgacgatgtagataaacacggcgatgacaagtgcaaaa 2828

                                                                        
Query: 274  atgtacacagatgtcttcaacttcctgcagctgcccgcggcatatgccccaagtaaacca 333
            |||||  |||||||||| ||||||||||||||||| || |||||||||||||| | ||||
Sbjct: 2827 atgtatgcagatgtcttgaacttcctgcagctgccggctgcatatgccccaaggagacca 2768

                                                                        
Query: 334  agcaagtccaataccattgctgttttcatggcaaagagagatctcttgtacttgcttatt 393
            |||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||
Sbjct: 2767 agcaagtctaataccattgctgtcttcatggcaaggagtgatctcttgtacttgcttatt 2708

             
Query: 394  g 394
            |
Sbjct: 2707 g 2707
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>dbj|AK073114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F13, full
            insert sequence
          Length = 3190

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Minus

                                                                        
Query: 214  tcaaatgacaacaagacatggatgacgatgtagatgatcacagcaatgacgagtgcaaaa 273
            |||||||||| ||| ||||| |||||||||||||| | ||| || ||||| |||||||||
Sbjct: 2885 tcaaatgacagcaatacatgaatgacgatgtagataaacacggcgatgacaagtgcaaaa 2826

                                                                        
Query: 274  atgtacacagatgtcttcaacttcctgcagctgcccgcggcatatgccccaagtaaacca 333
            |||||  |||||||||| ||||||||||||||||| || |||||||||||||| | ||||
Sbjct: 2825 atgtatgcagatgtcttgaacttcctgcagctgccggctgcatatgccccaaggagacca 2766

                                                                        
Query: 334  agcaagtccaataccattgctgttttcatggcaaagagagatctcttgtacttgcttatt 393
            |||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||
Sbjct: 2765 agcaagtctaataccattgctgtcttcatggcaaggagtgatctcttgtacttgcttatt 2706

             
Query: 394  g 394
            |
Sbjct: 2705 g 2705
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>dbj|AK071459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089M14, full
            insert sequence
          Length = 3577

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Minus

                                                                        
Query: 214  tcaaatgacaacaagacatggatgacgatgtagatgatcacagcaatgacgagtgcaaaa 273
            |||||||||| ||| ||||| |||||||||||||| | ||| || ||||| |||||||||
Sbjct: 2887 tcaaatgacagcaatacatgaatgacgatgtagataaacacggcgatgacaagtgcaaaa 2828

                                                                        
Query: 274  atgtacacagatgtcttcaacttcctgcagctgcccgcggcatatgccccaagtaaacca 333
            |||||  |||||||||| ||||||||||||||||| || |||||||||||||| | ||||
Sbjct: 2827 atgtatgcagatgtcttgaacttcctgcagctgccggctgcatatgccccaaggagacca 2768

                                                                        
Query: 334  agcaagtccaataccattgctgttttcatggcaaagagagatctcttgtacttgcttatt 393
            |||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||
Sbjct: 2767 agcaagtctaataccattgctgtcttcatggcaaggagtgatctcttgtacttgcttatt 2708

             
Query: 394  g 394
            |
Sbjct: 2707 g 2707
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>dbj|AP004486.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05B20, TM0019a,
             complete sequence
          Length = 73833

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 187   ttctccttcactaagcttcccaattcgtcaaat 219
             |||||||||||||||||| ||||||| ||||||
Sbjct: 26275 ttctccttcactaagctttccaattcatcaaat 26243
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 287     tcttcaacttcctgcagctgcccgcggcatatgccccaa 325
               |||| ||||| ||||||||||| || |||||||||||||
Sbjct: 9822214 tcttgaacttgctgcagctgccagctgcatatgccccaa 9822252
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025D05
          Length = 145684

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 287   tcttcaacttcctgcagctgcccgcggcatatgccccaa 325
             |||| ||||| ||||||||||| || |||||||||||||
Sbjct: 86464 tcttgaacttgctgcagctgccagctgcatatgccccaa 86502
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>dbj|AK120954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E10, full
            insert sequence
          Length = 2917

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 286  gtcttcaacttcctgcagctgcccgcggca 315
            ||||||| ||||||||||||||| ||||||
Sbjct: 2040 gtcttcaccttcctgcagctgccggcggca 2011
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>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
              complete sequence
          Length = 185449

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 286    gtcttcaacttcctgcagctgcccgcggc 314
              ||||||| ||||||||||||||| |||||
Sbjct: 112636 gtcttcaccttcctgcagctgccggcggc 112608
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 286     gtcttcaacttcctgcagctgcccgcggc 314
               ||||||| ||||||||||||||| |||||
Sbjct: 1987329 gtcttcaccttcctgcagctgccggcggc 1987301
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 286     gtcttcaacttcctgcagctgcccgcggc 314
               ||||||| ||||||||||||||| |||||
Sbjct: 2041081 gtcttcaccttcctgcagctgccggcggc 2041053



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      actttttccccttctccttc 195
                ||||||||||||||||||||
Sbjct: 21051382 actttttccccttctccttc 21051401
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>gb|BC094404.1| Xenopus laevis cDNA clone MGC:85029 IMAGE:6326490, complete cds
          Length = 3177

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 3    gcaagaaaaacacaaattaca 23
            |||||||||||||||||||||
Sbjct: 1789 gcaagaaaaacacaaattaca 1809
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 286     gtcttcaacttcctgcagctgcccgcggc 314
               ||||||| ||||||||||||||| |||||
Sbjct: 2048862 gtcttcaccttcctgcagctgccggcggc 2048834



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      actttttccccttctccttc 195
                ||||||||||||||||||||
Sbjct: 21361623 actttttccccttctccttc 21361642
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 286     gtcttcaacttcctgcagctgcccgcggc 314
               ||||||| ||||||||||||||| |||||
Sbjct: 1987280 gtcttcaccttcctgcagctgccggcggc 1987252
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>emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa0028B04 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158885

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 286   gtcttcaacttcctgcagctgcccgcggc 314
             ||||||| ||||||||||||||| |||||
Sbjct: 18222 gtcttcaccttcctgcagctgccggcggc 18194
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 6       agaaaaacacaaattacaac 25
               ||||||||||||||||||||
Sbjct: 1585185 agaaaaacacaaattacaac 1585204
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>gb|AC132570.3| Mus musculus BAC clone RP24-531D1 from chromosome 5, complete sequence
          Length = 183005

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    tttgtcctggttccccatcagatg 124
              |||||||| |||||||||||||||
Sbjct: 144060 tttgtccttgttccccatcagatg 144037
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>emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chromosome 16, complete
             sequence
          Length = 213704

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   cacccactttttccccttct 190
             ||||||||||||||||||||
Sbjct: 87384 cacccactttttccccttct 87365
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>gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosome 5, complete sequence
          Length = 168528

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 202   cttcccaattcgtcaaatgacaac 225
             ||||||||||| ||||||||||||
Sbjct: 83252 cttcccaattcatcaaatgacaac 83275
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>emb|AL445217.3| Human DNA sequence from clone RP11-335G18 on chromosome 13 Contains the
             5' end of the EPSTI1 gene for epithelial stromal
             interaction 1 (breast) and the gene for a DNAJ
             domain-containing protein (MCJ), complete sequence
          Length = 161699

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   cactttttccccttctcctt 194
             ||||||||||||||||||||
Sbjct: 69026 cactttttccccttctcctt 69007
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>ref|XM_777291.1| PREDICTED: Strongylocentrotus purpuratus similar to minichromosome
            maintenance protein 10 (LOC577033), mRNA
          Length = 2004

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 137  aatcgttgcaattgaagaaccttt 160
            |||| |||||||||||||||||||
Sbjct: 1951 aatccttgcaattgaagaaccttt 1928
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>emb|AL162253.17| Human DNA sequence from clone RP11-574F11 on chromosome 9 Contains the
             gene for B7-H1 protein (PD-L1), the gene for programmed
             death ligand 2 (PDL2) (PDCD1L2) and a novel gene, complete
             sequence
          Length = 146327

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tccccatcagatggttcatt 131
             ||||||||||||||||||||
Sbjct: 58196 tccccatcagatggttcatt 58215
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>emb|AL162455.14| Human DNA sequence from clone RP11-62D23 on chromosome 13 Contains
            part of the GPC6 gene for glypican 6 and a novel gene,
            complete sequence
          Length = 173736

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  atctcttgtacttgcttatt 393
            ||||||||||||||||||||
Sbjct: 3146 atctcttgtacttgcttatt 3165
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>emb|AL157918.1|SPBC21C3 S.pombe chromosome II cosmid c21C3
          Length = 43610

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 287   tcttcaacttcctgcagctgcccg 310
             |||||||||||||| |||||||||
Sbjct: 24717 tcttcaacttcctggagctgcccg 24740
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>gb|AC108169.5| Homo sapiens BAC clone RP11-1236J3 from 4, complete sequence
          Length = 111806

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   caaaaatgtacacagatgtc 288
             ||||||||||||||||||||
Sbjct: 83952 caaaaatgtacacagatgtc 83933
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>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, complete sequence
          Length = 152272

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   actttttccccttctccttc 195
             ||||||||||||||||||||
Sbjct: 53697 actttttccccttctccttc 53716
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>emb|AL954812.14| Zebrafish DNA sequence from clone DKEY-50G15, complete sequence
          Length = 192304

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    cccactttttccccttctccttca 196
              |||||||||||||| |||||||||
Sbjct: 181907 cccactttttccccatctccttca 181884
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>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, sequencing in progress, complete sequence
          Length = 152272

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   actttttccccttctccttc 195
             ||||||||||||||||||||
Sbjct: 53697 actttttccccttctccttc 53716
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>ref|NM_001022511.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC21C3.11),
           partial mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 tcttcaacttcctgcagctgcccg 310
           |||||||||||||| |||||||||
Sbjct: 285 tcttcaacttcctggagctgcccg 308
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>gb|AC153525.12| Mus musculus 10 BAC RP23-440I21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199418

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    gatggttcattgcttgaatc 140
              ||||||||||||||||||||
Sbjct: 108975 gatggttcattgcttgaatc 108956
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>gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete sequence
          Length = 197659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     agaaaaacacaaattacaac 25
             ||||||||||||||||||||
Sbjct: 39754 agaaaaacacaaattacaac 39773
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>gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complete sequence
          Length = 218524

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 202   cttcccaattcgtcaaatgacaac 225
             ||||||||||| ||||||||||||
Sbjct: 14136 cttcccaattcatcaaatgacaac 14159


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,286,010
Number of Sequences: 3902068
Number of extensions: 4286010
Number of successful extensions: 89003
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88788
Number of HSP's gapped (non-prelim): 215
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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