Clone Name | rbastl53e09 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NU3M_ANOGA (P34850) NADH-ubiquinone oxidoreductase chain 3 (EC 1... | 29 | 2.5 | 2 | AIG1_HUMAN (Q9NVV5) Androgen-induced protein 1 (AIG-1) | 28 | 5.6 | 3 | AIG1_MOUSE (Q9D8B1) Androgen-induced protein 1 (AIG-1) | 28 | 7.3 |
---|
>NU3M_ANOGA (P34850) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 117 Score = 29.3 bits (64), Expect = 2.5 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 9/63 (14%) Frame = -3 Query: 167 VLNTLTMYIISGQLCIMYMATLATKKA*LDR---------WQPANSAF*CFIIRQLIQAN 15 +L+T+T+ I + +M +ATL +KK LDR + P NS+ F +R + A Sbjct: 3 MLSTMTLIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAI 62 Query: 14 MYL 6 ++L Sbjct: 63 IFL 65
>AIG1_HUMAN (Q9NVV5) Androgen-induced protein 1 (AIG-1)| Length = 245 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -1 Query: 169 PC*ILSLCTLSQVSYVLCIWQH*QLKKHS*IGGSRQIVPFDVLLSDN*FKRICI 8 PC +L + L +LC ++ ++ H GGS + + F L+ F IC+ Sbjct: 5 PCQVLRMAILLSYCSILCNYKAIEMPSHQTYGGSWKFLTFIDLVIQAVFFGICV 58
>AIG1_MOUSE (Q9D8B1) Androgen-induced protein 1 (AIG-1)| Length = 262 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -1 Query: 169 PC*ILSLCTLSQVSYVLCIWQH*QLKKHS*IGGSRQIVPFDVLLSDN*FKRICI 8 PC +L + L +LC ++ ++ H GGS + + F L+ F IC+ Sbjct: 5 PCQVLRVAILLSYCSILCNYKAIEMPSHQTYGGSWKFLTFIDLVIQAVFFGICV 58 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,314,986 Number of Sequences: 219361 Number of extensions: 769501 Number of successful extensions: 1224 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1212 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1224 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)