ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl53e08 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 133 bits (334), Expect = 1e-31 Identities = 66/71 (92%), Positives = 66/71 (92%), Gaps = 5/71 (7%) Frame = -3 Query: 391 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPTDEKMV 227 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS DGDPTDEKMV Sbjct: 866 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMV 925 Query: 226 MEMGIPNSISI 194 MEMGIPNSISI Sbjct: 926 MEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 95.9 bits (237), Expect = 2e-20 Identities = 43/66 (65%), Positives = 54/66 (81%) Frame = -3 Query: 391 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGI 212 +++AF+ F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D K VMEMGI Sbjct: 867 VDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGI 926 Query: 211 PNSISI 194 PNSISI Sbjct: 927 PNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 53.9 bits (128), Expect = 9e-08 Identities = 30/66 (45%), Positives = 39/66 (59%) Frame = -3 Query: 391 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGI 212 + AFE+F ++ +D NN+P+ KNR GAG+VPY LL+ P E V GI Sbjct: 836 VKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRGI 890 Query: 211 PNSISI 194 PNSISI Sbjct: 891 PNSISI 896
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 51.2 bits (121), Expect = 6e-07 Identities = 29/64 (45%), Positives = 38/64 (59%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 +AFE+F E ++I + +DE N+D KNR G +PY LL PS E V GIPN Sbjct: 801 EAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPN 855 Query: 205 SISI 194 S+SI Sbjct: 856 SVSI 859
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 50.8 bits (120), Expect = 8e-07 Identities = 25/63 (39%), Positives = 37/63 (58%) Frame = -3 Query: 382 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 203 A EF R+ E+++ N DP R+NR GAG++PY L+ PS G + G+PNS Sbjct: 842 AAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNS 896 Query: 202 ISI 194 ++I Sbjct: 897 VTI 899
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 50.1 bits (118), Expect = 1e-06 Identities = 31/66 (46%), Positives = 38/66 (57%) Frame = -3 Query: 391 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGI 212 IN AFE FK + + +DE N + KNR GAG+V Y LL+ PT E V MG+ Sbjct: 836 INAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMGV 890 Query: 211 PNSISI 194 P SISI Sbjct: 891 PYSISI 896
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 46.6 bits (109), Expect = 1e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -3 Query: 382 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMGIP 209 AF+ F I ++ + N + KNR+G +PY+LL P+ D T EK + MGIP Sbjct: 813 AFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIP 872 Query: 208 NSISI 194 NSISI Sbjct: 873 NSISI 877
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 46.2 bits (108), Expect = 2e-05 Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGIP 209 +AF+ F +I +V N DP RKNR G PY LL P+ D D + GIP Sbjct: 806 EAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865 Query: 208 NSISI 194 NSISI Sbjct: 866 NSISI 870
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/64 (40%), Positives = 38/64 (59%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 +AF+ F + +I E++ + NND +NR+G +PY LL PS E+ + GIPN Sbjct: 808 EAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRGIPN 862 Query: 205 SISI 194 SISI Sbjct: 863 SISI 866
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 45.4 bits (106), Expect = 3e-05 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIP 209 + F+ F + +I +V N+DP+ KNR+G PY+LL P+ D + GIP Sbjct: 798 EVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIP 857 Query: 208 NSISI 194 NSISI Sbjct: 858 NSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 45.1 bits (105), Expect = 4e-05 Identities = 25/64 (39%), Positives = 38/64 (59%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 +AF++F +I +++ + NND +NRHG +PY LL PS ++ + GIPN Sbjct: 803 EAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPN 857 Query: 205 SISI 194 SISI Sbjct: 858 SISI 861
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 44.3 bits (103), Expect = 7e-05 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPD-RKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIP 209 QAF++F ++I E++ NNDP + NR G +PY LL PS E+ + GIP Sbjct: 780 QAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS-----SEEGLTFRGIP 834 Query: 208 NSISI 194 NSISI Sbjct: 835 NSISI 839
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 44.3 bits (103), Expect = 7e-05 Identities = 25/64 (39%), Positives = 37/64 (57%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 +AF+ F + +I +++ E N D +NR+G +PY LL PS E+ + GIPN Sbjct: 795 EAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPN 849 Query: 205 SISI 194 SISI Sbjct: 850 SISI 853
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 43.9 bits (102), Expect = 9e-05 Identities = 26/59 (44%), Positives = 32/59 (54%) Frame = -3 Query: 370 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 194 F R+ E ++ N D RKNR GAG++PY LL PS V G+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 43.9 bits (102), Expect = 9e-05 Identities = 26/64 (40%), Positives = 34/64 (53%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 QAF++F ++I E++ NND NR G +PY LL P+ T GIPN Sbjct: 808 QAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPN 861 Query: 205 SISI 194 SISI Sbjct: 862 SISI 865
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 43.9 bits (102), Expect = 9e-05 Identities = 25/66 (37%), Positives = 36/66 (54%) Frame = -3 Query: 391 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGI 212 + A++ F ++I +D N D KNR GAG++PY L++ P + V MGI Sbjct: 864 VQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGI 918 Query: 211 PNSISI 194 PNS SI Sbjct: 919 PNSTSI 924
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 43.9 bits (102), Expect = 9e-05 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIP 209 +AF F + +I +V N D KNR+G PY+LL P+ D T + GIP Sbjct: 802 EAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861 Query: 208 NSISI 194 NSISI Sbjct: 862 NSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 43.1 bits (100), Expect = 2e-04 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Frame = -3 Query: 385 QAFEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEM 218 +A E FK +R++VE +V N DP KNR G PY L+ P+ D + + Sbjct: 796 KALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITAR 855 Query: 217 GIPNSISI 194 GIPNSISI Sbjct: 856 GIPNSISI 863
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 42.7 bits (99), Expect = 2e-04 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 391 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMG 215 + A+ F ++I +D N D KNR GAG++PY L++P SD T MG Sbjct: 881 VQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG------MG 934 Query: 214 IPNSISI 194 IPNS SI Sbjct: 935 IPNSTSI 941
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 +AF+ F +I ++ E NND +NR G +PY LL PS ++ + GIPN Sbjct: 799 EAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPN 853 Query: 205 SISI 194 SISI Sbjct: 854 SISI 857
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/64 (35%), Positives = 38/64 (59%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 QAF+ F + ++I E++ N D +NR+G +PY +L P+ +++ + GIPN Sbjct: 803 QAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPN 858 Query: 205 SISI 194 SISI Sbjct: 859 SISI 862
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 QAF++F +I ++ NNDP +R G +PY LL PS ++ + GIPN Sbjct: 806 QAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPN 860 Query: 205 SISI 194 SISI Sbjct: 861 SISI 864
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 40.0 bits (92), Expect = 0.001 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 206 +AF+ F I +++ N+DP +NR G +PY LL S E+ + GIPN Sbjct: 806 EAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPN 860 Query: 205 SISI 194 SISI Sbjct: 861 SISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 38.9 bits (89), Expect = 0.003 Identities = 25/63 (39%), Positives = 32/63 (50%) Frame = -3 Query: 382 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 203 AFE F + I ++ N+ KNR G VPY LL PT E+ + GIPNS Sbjct: 802 AFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEGLTGKGIPNS 856 Query: 202 ISI 194 +SI Sbjct: 857 VSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 37.4 bits (85), Expect = 0.009 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = -3 Query: 382 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 203 AF+ F + I +Q+ + N D NR G PY LL PT E + GIPNS Sbjct: 804 AFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGLTGKGIPNS 858 Query: 202 ISI 194 +SI Sbjct: 859 VSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 35.8 bits (81), Expect = 0.025 Identities = 24/63 (38%), Positives = 30/63 (47%) Frame = -3 Query: 382 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 203 AFE F I +Q+ + N + NR G PY LL PT E + GIPNS Sbjct: 803 AFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL-----FPTSEGGLTGKGIPNS 857 Query: 202 ISI 194 +SI Sbjct: 858 VSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 35.0 bits (79), Expect = 0.043 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -3 Query: 385 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 257 +AF+ F + +I +++ + NND +NR G +PY LL PS Sbjct: 689 EAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.48 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 347 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 189 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 337 VDEWNNDPDRKNRHGAGMVPYV 272 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 Query: 314 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 210 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>ENP1_PIG (Q9MYU4) Ectonucleoside triphosphate diphosphohydrolase 1 (EC| 3.6.1.5) (NTPDase1) (Ecto-ATP diphosphohydrolase) (ATPDase) (Lymphoid cell activation antigen) (Ecto-apyrase) (CD39 antigen) [Contains: Ectonucleoside triphosphate diphosphohydrolase Length = 510 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = +2 Query: 35 SRKRLSRATYIYIIVSFNYNLVLIPII 115 S RLS +TY++++V F+ LV++ II Sbjct: 468 SSTRLSHSTYVFLMVLFSLILVIVVII 494
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +1 Query: 319 RCSTHPPAPRSSWCSP*TPQMP 384 RC PP PR SWC P P P Sbjct: 64 RCPRCPPCPRCSWC-PRCPTCP 84
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = +3 Query: 279 GTMPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWL 389 G PCR SG S C+ + + ++SN WL Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWL 67
>ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex epsilon subunit| 2 (ACDS complex epsilon subunit 2) Length = 170 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 130 WPGGGYNGNEHQIIIKGHDDIYI 62 WPG NGN II+ GH YI Sbjct: 99 WPGLDGNGNYDTIILLGHKKYYI 121
>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +2 Query: 92 NLVLIPIIPTAGPRD*RHSYLRLVELHTHTQG 187 N +L PII T RD RH+ LRLV H+ G Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329
>TSGA_BUCAI (P57601) Protein tsgA homolog| Length = 388 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -3 Query: 391 INQAFEEFKESTRKIVEQVDEWN 323 IN +FE+FK +T+ E ++WN Sbjct: 181 INSSFEKFKTNTKNSKETKEKWN 203
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 Query: 370 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 248 FK RK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,905,857 Number of Sequences: 219361 Number of extensions: 1266001 Number of successful extensions: 3391 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3366 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
