ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105064.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 4e-50
2dbj|AK066419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 4e-50
3ref|XM_478918.1| Oryza sativa (japonica cultivar-group), mRNA 194 2e-46
4gb|BT019233.1| Zea mays clone Contig906.F mRNA sequence 182 6e-43
5gb|AY103700.1| Zea mays PCO104752 mRNA sequence 182 6e-43
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
7dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
8dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
9gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence 141 2e-30
10ref|NM_126159.2| Arabidopsis thaliana FRO1 (FROSTBITE1) AT5G6759... 54 4e-04
11gb|U83836.1|ATU83836 Arabidopsis thaliana telomere repeat bindin... 54 4e-04
12emb|BX829644.1|CNS0A05R Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
13gb|BT003675.1| Arabidopsis thaliana At5g67590 mRNA, complete cds 54 4e-04
14gb|AY086840.1| Arabidopsis thaliana clone 28455 mRNA, complete s... 54 4e-04
15dbj|AK118663.1| Arabidopsis thaliana At5g67590 mRNA for unknown ... 54 4e-04
16dbj|AB013390.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 4e-04
17emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chr... 46 0.090
18ref|XM_553627.1| Anopheles gambiae str. PEST ENSANGP00000014170 ... 44 0.35
19gb|AC010145.10| Homo sapiens BAC clone RP11-355H10 from 2, compl... 42 1.4
20ref|XM_310123.2| Anopheles gambiae str. PEST ENSANGP00000022494 ... 42 1.4
21gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.4
22gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete se... 40 5.5
23ref|XM_784283.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.5
24ref|NM_001016994.2| Xenopus tropicalis Nedd4 family interacting ... 40 5.5
25emb|CR457453.7| Zebrafish DNA sequence from clone CH211-76I17 in... 40 5.5
26gb|AC093270.3| Homo sapiens chromosome 5 clone RP11-342F17, comp... 40 5.5
27gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-4... 40 5.5
28gb|AC137484.2| Rattus Norvegicus Strain BN/SsNHsd/MCW BAC, CH230... 40 5.5
29gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Can... 40 5.5
30emb|CR848172.2| Xenopus tropicalis finished cDNA, clone TGas080d09 40 5.5
31dbj|AP002360.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.5
32emb|AL824716.8| Mouse DNA sequence from clone RP23-277F20 on chr... 40 5.5 
>dbj|AK105064.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E08, full
           insert sequence
          Length = 848

 Score =  206 bits (104), Expect = 4e-50
 Identities = 161/180 (89%)
 Strand = Plus / Minus

                                                                       
Query: 234 tccacttaaagttctctgcgtacgttttgggcttcaaaagaggtgtgtggcgcttcctaa 293
           ||||||| ||||||||||| || | ||||| |||||||||| |||| ||||| |||||||
Sbjct: 560 tccacttgaagttctctgcataagatttggccttcaaaagaagtgtatggcgtttcctaa 501

                                                                       
Query: 294 ccacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaacg 353
           ||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 500 ccacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaacg 441

                                                                       
Query: 354 taagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatg 413
           |||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 440 taagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaatg 381
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>dbj|AK066419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066N17, full
           insert sequence
          Length = 820

 Score =  206 bits (104), Expect = 4e-50
 Identities = 161/180 (89%)
 Strand = Plus / Minus

                                                                       
Query: 234 tccacttaaagttctctgcgtacgttttgggcttcaaaagaggtgtgtggcgcttcctaa 293
           ||||||| ||||||||||| || | ||||| ||||||||||||||| ||||| |||||||
Sbjct: 540 tccacttgaagttctctgcataagatttggccttcaaaagaggtgtatggcgtttcctaa 481

                                                                       
Query: 294 ccacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaacg 353
           ||||||| ||||||||||| || |||||||||||||||||||| || || ||||||||||
Sbjct: 480 ccacataatcccatccatgcttttcagcaaatgcctttgctgaatctgctctgtcaaacg 421

                                                                       
Query: 354 taagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatg 413
           |||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 420 taagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaatg 361
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>ref|XM_478918.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 438

 Score =  194 bits (98), Expect = 2e-46
 Identities = 137/150 (91%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcttcaaaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaa 323
           |||||||||||||||| ||||| |||||||||||||| ||||||||||| || |||||||
Sbjct: 421 gcttcaaaagaggtgtatggcgtttcctaaccacataatcccatccatgcttttcagcaa 362

                                                                       
Query: 324 atgcctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacg 383
           ||||||||||||| || ||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 361 atgcctttgctgaatctgcactgtcaaacgtaagccctgcttcaccaacattagcatatg 302

                                         
Query: 384 gatcaccagtcgatgtccatcccatcaatg 413
           |||| ||||| |||||||||||||| ||||
Sbjct: 301 gatctccagtagatgtccatcccattaatg 272
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>gb|BT019233.1| Zea mays clone Contig906.F mRNA sequence
          Length = 1470

 Score =  182 bits (92), Expect = 6e-43
 Identities = 176/204 (86%)
 Strand = Plus / Plus

                                                                        
Query: 208  tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgtacgttttgggctt 267
            ||||| ||||| |||||| |||||||||||||| |||||||| ||||| |  || |||||
Sbjct: 997  tgcttgctccgccttcggggggcctttccacttgaagttctcagcgtaggccttaggctt 1056

                                                                        
Query: 268  caaaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaaatgc 327
            || ||||||||| || || ||||  |||||||| | |||||||||||| |||||||||||
Sbjct: 1057 cagaagaggtgtatgccgtttccgtaccacataattccatccatgtttttcagcaaatgc 1116

                                                                        
Query: 328  ctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacggatc 387
             ||||||||||| |||||||  || |||||||| |||||||| ||||||||||| |||||
Sbjct: 1117 ttttgctgactccgcactgttgaatgtaagtcctgcttcaccgacattagcatatggatc 1176

                                    
Query: 388  accagtcgatgtccatcccatcaa 411
             ||||| |||||||||||||||||
Sbjct: 1177 cccagtagatgtccatcccatcaa 1200
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>gb|AY103700.1| Zea mays PCO104752 mRNA sequence
          Length = 837

 Score =  182 bits (92), Expect = 6e-43
 Identities = 176/204 (86%)
 Strand = Plus / Minus

                                                                       
Query: 208 tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgtacgttttgggctt 267
           ||||| |||||  ||||| |||||| ||||||| |||||||| ||||| |  || ||| |
Sbjct: 583 tgcttgctccgctttcggagggcctctccacttgaagttctcagcgtaggccttaggcct 524

                                                                       
Query: 268 caaaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaaatgc 327
           || ||||||||  ||||| |||| ||||||||| | |||||||||||| || ||||| ||
Sbjct: 523 cagaagaggtgcatggcgtttccgaaccacataattccatccatgtttttcggcaaacgc 464

                                                                       
Query: 328 ctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacggatc 387
           |||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 463 ctttgctgactctgcactgtcaaacgtaagtcctgcttcaccgacattagcatatggatc 404

                                   
Query: 388 accagtcgatgtccatcccatcaa 411
            ||||| |||||||||||||||||
Sbjct: 403 cccagtagatgtccatcccatcaa 380
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  153 bits (77), Expect = 5e-34
 Identities = 110/121 (90%)
 Strand = Plus / Plus

                                                                            
Query: 293      accacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaac 352
                |||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||
Sbjct: 23746846 accacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaac 23746905

                                                                            
Query: 353      gtaagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaat 412
                ||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 23746906 gtaagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaat 23746965

                 
Query: 413      g 413
                |
Sbjct: 23746966 g 23746966



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 265      cttcaaaagaggtgtgtggcgcttcctaacc 295
                ||||||||||||||| ||||| |||||||||
Sbjct: 23746144 cttcaaaagaggtgtatggcgtttcctaacc 23746174
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score =  153 bits (77), Expect = 5e-34
 Identities = 110/121 (90%)
 Strand = Plus / Plus

                                                                         
Query: 293   accacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaac 352
             |||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||
Sbjct: 91460 accacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaac 91519

                                                                         
Query: 353   gtaagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaat 412
             ||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 91520 gtaagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaat 91579

              
Query: 413   g 413
             |
Sbjct: 91580 g 91580



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 265   cttcaaaagaggtgtgtggcgcttcctaacc 295
             ||||||||||||||| ||||| |||||||||
Sbjct: 90758 cttcaaaagaggtgtatggcgtttcctaacc 90788
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>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1113_E01
          Length = 73706

 Score =  153 bits (77), Expect = 5e-34
 Identities = 110/121 (90%)
 Strand = Plus / Plus

                                                                        
Query: 293  accacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaac 352
            |||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||
Sbjct: 1776 accacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaac 1835

                                                                        
Query: 353  gtaagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaat 412
            ||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 1836 gtaagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaat 1895

             
Query: 413  g 413
            |
Sbjct: 1896 g 1896



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 265  cttcaaaagaggtgtgtggcgcttcctaacc 295
            ||||||||||||||| ||||| |||||||||
Sbjct: 1074 cttcaaaagaggtgtatggcgtttcctaacc 1104
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>gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence
          Length = 1896

 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Plus

                                                                        
Query: 265  cttcaaaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaaa 324
            ||||| ||||||||| || || ||||  |||||||| | |||||||||||| ||||||||
Sbjct: 1473 cttcagaagaggtgtatgccgtttccgtaccacataattccatccatgtttttcagcaaa 1532

                                                                        
Query: 325  tgcctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacgg 384
            ||| ||||||||||| |||||||  || |||||||| |||||||| ||||||||||| ||
Sbjct: 1533 tgcttttgctgactccgcactgttgaatgtaagtcctgcttcaccgacattagcatatgg 1592

                                       
Query: 385  atcaccagtcgatgtccatcccatcaa 411
            ||| ||||| |||||||||||||||||
Sbjct: 1593 atccccagtagatgtccatcccatcaa 1619



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 208 tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgta 255
           ||||| ||||| |||||| |||||||||||||| |||||||| |||||
Sbjct: 261 tgcttgctccgccttcggggggcctttccacttgaagttctcagcgta 308
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>ref|NM_126159.2| Arabidopsis thaliana FRO1 (FROSTBITE1) AT5G67590 (FRO1) mRNA,
           complete cds
          Length = 731

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 365 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaa 411
           ||||||||||||||||| || ||||| || || ||||||||||||||
Sbjct: 375 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaa 329
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>gb|U83836.1|ATU83836 Arabidopsis thaliana telomere repeat binding factor 2 (TRB2) gene,
            complete cds
          Length = 6079

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 365  tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaa 411
            ||||||||||||||||| || ||||| || || ||||||||||||||
Sbjct: 2803 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaa 2849
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>emb|BX829644.1|CNS0A05R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB27ZC07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 653

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 365 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaa 411
           ||||||||||||||||| || ||||| || || ||||||||||||||
Sbjct: 314 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaa 268
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>gb|BT003675.1| Arabidopsis thaliana At5g67590 mRNA, complete cds
          Length = 465

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 365 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaa 411
           ||||||||||||||||| || ||||| || || ||||||||||||||
Sbjct: 308 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaa 262
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>gb|AY086840.1| Arabidopsis thaliana clone 28455 mRNA, complete sequence
          Length = 708

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 365 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaa 411
           ||||||||||||||||| || ||||| || || ||||||||||||||
Sbjct: 375 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaa 329
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>dbj|AK118663.1| Arabidopsis thaliana At5g67590 mRNA for unknown protein, complete
           cds, clone: RAFL19-93-I02
          Length = 713

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 365 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaa 411
           ||||||||||||||||| || ||||| || || ||||||||||||||
Sbjct: 357 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaa 311
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>dbj|AB013390.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9I9
          Length = 51860

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 365   tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaa 411
             ||||||||||||||||| || ||||| || || ||||||||||||||
Sbjct: 37877 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaa 37831
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>emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chromosome 9, complete
              sequence
          Length = 187876

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 309    catgtttgtcagcaaatgccttt 331
              |||||||||||||||||||||||
Sbjct: 153852 catgtttgtcagcaaatgccttt 153874
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>ref|XM_553627.1| Anopheles gambiae str. PEST ENSANGP00000014170 (ENSANGG00000011681),
            partial mRNA
          Length = 2922

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 274  aggtgtgtggcgcttcctaaccacat 299
            |||||||||| |||||||||||||||
Sbjct: 2581 aggtgtgtggtgcttcctaaccacat 2606
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>gb|AC010145.10| Homo sapiens BAC clone RP11-355H10 from 2, complete sequence
          Length = 198960

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 152    agaaagagaacatcttttgaa 172
              |||||||||||||||||||||
Sbjct: 129878 agaaagagaacatcttttgaa 129898
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>ref|XM_310123.2| Anopheles gambiae str. PEST ENSANGP00000022494 (ENSANGG00000021246),
            partial mRNA
          Length = 3363

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 274  aggtgtgtggcgcttcctaaccaca 298
            |||||||||| ||||||||||||||
Sbjct: 2662 aggtgtgtggtgcttcctaaccaca 2686
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
             complete sequence
          Length = 867699

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    caaacatttttcatgagatga 43
             |||||||||||||||||||||
Sbjct: 96944 caaacatttttcatgagatga 96924
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>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
          Length = 127126

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tggaacaaagtaaaatcagc 140
             ||||||||||||||||||||
Sbjct: 11573 tggaacaaagtaaaatcagc 11554
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>ref|XM_784283.1| PREDICTED: Strongylocentrotus purpuratus similar to Multidrug
            resistance-associated protein 5 (LOC584425), mRNA
          Length = 2283

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  cgatgtccatcccatcaatg 413
            ||||||||||||||||||||
Sbjct: 1735 cgatgtccatcccatcaatg 1716
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>ref|NM_001016994.2| Xenopus tropicalis Nedd4 family interacting protein 2 (ndfip2), mRNA
          Length = 2429

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  catgtttgtcagcaaatgcc 328
            ||||||||||||||||||||
Sbjct: 2067 catgtttgtcagcaaatgcc 2048
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>emb|CR457453.7| Zebrafish DNA sequence from clone CH211-76I17 in linkage group 14,
              complete sequence
          Length = 171899

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     caaacatttttcatgagatg 42
              ||||||||||||||||||||
Sbjct: 113151 caaacatttttcatgagatg 113132
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>gb|AC093270.3| Homo sapiens chromosome 5 clone RP11-342F17, complete sequence
          Length = 184585

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   gtcagcaaatgcctttgctg 335
             ||||||||||||||||||||
Sbjct: 67905 gtcagcaaatgcctttgctg 67886
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>gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-41a4, complete
            sequence
          Length = 55550

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  tggaacaaagtaaaatcagc 140
            ||||||||||||||||||||
Sbjct: 1812 tggaacaaagtaaaatcagc 1831
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>gb|AC137484.2| Rattus Norvegicus Strain BN/SsNHsd/MCW BAC, CH230-349A03, complete
             sequence
          Length = 164897

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    agagacaaattcagttgcaa 62
             ||||||||||||||||||||
Sbjct: 83710 agagacaaattcagttgcaa 83691
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>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191463

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     gaattaacaaacatttttca 35
              ||||||||||||||||||||
Sbjct: 161431 gaattaacaaacatttttca 161412
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>emb|CR848172.2| Xenopus tropicalis finished cDNA, clone TGas080d09
          Length = 2429

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  catgtttgtcagcaaatgcc 328
            ||||||||||||||||||||
Sbjct: 2067 catgtttgtcagcaaatgcc 2048
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>dbj|AP002360.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-111M22, complete
              sequences
          Length = 173379

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 355    aagtccagcttcaccaacat 374
              ||||||||||||||||||||
Sbjct: 142590 aagtccagcttcaccaacat 142609
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>emb|AL824716.8| Mouse DNA sequence from clone RP23-277F20 on chromosome 4, complete
              sequence
          Length = 185441

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    cttttgaaaatctccagaca 184
              ||||||||||||||||||||
Sbjct: 110433 cttttgaaaatctccagaca 110452


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,274,422
Number of Sequences: 3902068
Number of extensions: 4274422
Number of successful extensions: 98898
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98816
Number of HSP's gapped (non-prelim): 82
length of query: 413
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 391
effective length of database: 17,147,199,772
effective search space: 6704555110852
effective search space used: 6704555110852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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