>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 258      ttcctcgagctctaccgaagctacagatgccactgca 294
                |||||| | |||||| |||||||||||||||| ||||
Sbjct: 29114508 ttcctcaatctctactgaagctacagatgccagtgca 29114472

>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0421H07
          Length = 158126

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 258   ttcctcgagctctaccgaagctacagatgccactgca 294
             |||||| | |||||| |||||||||||||||| ||||
Sbjct: 74874 ttcctcaatctctactgaagctacagatgccagtgca 74838

>gb|AC132954.4| Mus musculus BAC clone RP24-210F23 from 12, complete sequence
          Length = 160118

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   gaaccatttccttttgccttg 245
             |||||||||||||||||||||
Sbjct: 85929 gaaccatttccttttgccttg 85949

>ref|XM_513613.1| PREDICTED: Pan troglodytes similar to KIAA0893 protein (LOC457082),
            mRNA
          Length = 3124

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2142 agctacagatgccactgcac 2123

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    aggccgtaagccgccaggcc 151
              ||||||||||||||||||||
Sbjct: 119940 aggccgtaagccgccaggcc 119921

>ref|XM_864695.1| PREDICTED: Bos taurus similar to WD-repeat protein 47, transcript
            variant 2 (LOC512354), mRNA
          Length = 4226

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2680 agctacagatgccactgcac 2661

>ref|XM_589861.2| PREDICTED: Bos taurus similar to WD-repeat protein 47, transcript
            variant 1 (LOC512354), mRNA
          Length = 3883

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2337 agctacagatgccactgcac 2318

>ref|XM_873788.1| PREDICTED: Bos taurus similar to WD-repeat protein 47, transcript
            variant 3 (LOC512354), mRNA
          Length = 4186

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2640 agctacagatgccactgcac 2621

>gb|AC121906.3| Mus musculus BAC clone RP24-176E21 from chromosome 3, complete sequence
          Length = 171059

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 219   tctcttgaaccatttccttttgcc 242
             ||||||||||||||||||| ||||
Sbjct: 71165 tctcttgaaccatttccttgtgcc 71142

>ref|NM_014969.3| Homo sapiens WD repeat domain 47 (WDR47), mRNA
          Length = 4259

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2685 agctacagatgccactgcac 2666

>emb|BX679664.7| Human DNA sequence from clone RP11-20O24 on chromosome 1 Contains the
            TAF13 gene for TAF13 RNA polymerase II TATA box binding
            protein (TBP)-associated factor 18kDa, a RAN member RAS
            oncogene family (RAN) pseudogene, a ribosomal protein S27
            (metallopanstimulin 1) (RPS27) pseudogene, the 5' end of
            a novel gene (KIAA0893) and three CpG islands, complete
            sequence
          Length = 107685

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 3053 agctacagatgccactgcac 3072

>gb|BC034964.2| Homo sapiens WD repeat domain 47, mRNA (cDNA clone MGC:26714
            IMAGE:4823902), complete cds
          Length = 4259

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2685 agctacagatgccactgcac 2666

>gb|BC039254.1| Homo sapiens WD repeat domain 47, mRNA (cDNA clone MGC:33742
            IMAGE:5287954), complete cds
          Length = 4181

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2593 agctacagatgccactgcac 2574

>emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 238147

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ctaaaacacttgaccagata 44
              ||||||||||||||||||||
Sbjct: 224012 ctaaaacacttgaccagata 224031

>emb|BX936335.6| Zebrafish DNA sequence from clone CH211-287C12 in linkage group 3,
            complete sequence
          Length = 62086

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  taatacgtacaacatgatga 121
            ||||||||||||||||||||
Sbjct: 8861 taatacgtacaacatgatga 8842

>dbj|AK074616.1| Homo sapiens cDNA FLJ90135 fis, clone HEMBB1000668
          Length = 2375

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 agctacagatgccactgcac 295
           ||||||||||||||||||||
Sbjct: 824 agctacagatgccactgcac 805

>ref|NM_031320.1| Rattus norvegicus cadherin EGF LAG seven-pass G-type receptor 3
            (Celsr3), mRNA
          Length = 11868

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 32   acttgaccagatacaagctctaga 55
            |||||||||| |||||||||||||
Sbjct: 4977 acttgaccagctacaagctctaga 4954

>dbj|AB020700.1| Homo sapiens mRNA for KIAA0893 protein, partial cds
          Length = 4195

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agctacagatgccactgcac 295
            ||||||||||||||||||||
Sbjct: 2644 agctacagatgccactgcac 2625

>gb|AF118228.1|AF118228 Mus musculus Ksp-cadherin gene, promoter region and partial cds
          Length = 4884

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  gctacagatgccactgcaca 296
            ||||||||||||||||||||
Sbjct: 3421 gctacagatgccactgcaca 3440

>gb|AC138617.4| Mus musculus BAC clone RP23-403G9 from 8, complete sequence
          Length = 204919

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    gctacagatgccactgcaca 296
              ||||||||||||||||||||
Sbjct: 149203 gctacagatgccactgcaca 149184

>dbj|AB011528.1| Rattus norvegicus mRNA for MEGF2, complete cds
          Length = 11868

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 32   acttgaccagatacaagctctaga 55
            |||||||||| |||||||||||||
Sbjct: 4977 acttgaccagctacaagctctaga 4954


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,428,955
Number of Sequences: 3902068
Number of extensions: 2428955
Number of successful extensions: 39031
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38989
Number of HSP's gapped (non-prelim): 42
length of query: 313
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 291
effective length of database: 17,147,199,772
effective search space: 4989835133652
effective search space used: 4989835133652
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)