Clone Name | rbastl53e04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PURL_THET8 (Q5SMH8) Phosphoribosylformylglycinamidine synthase I... | 29 | 3.0 | 2 | PURL_THET2 (Q72IH7) Phosphoribosylformylglycinamidine synthase I... | 29 | 3.0 | 3 | YEGT_ECOLI (P76417) Putative nucleoside transporter yegT | 28 | 8.7 |
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>PURL_THET8 (Q5SMH8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 725 Score = 29.3 bits (64), Expect = 3.0 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 177 APLGLWRYYSGERTGRDGLGWGYF 106 A LG YY+G +TGRDG+G F Sbjct: 191 ASLGRPIYYAGAKTGRDGIGGAAF 214
>PURL_THET2 (Q72IH7) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 725 Score = 29.3 bits (64), Expect = 3.0 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 177 APLGLWRYYSGERTGRDGLGWGYF 106 A LG YY+G +TGRDG+G F Sbjct: 191 ASLGRPIYYAGAKTGRDGIGGAAF 214
>YEGT_ECOLI (P76417) Putative nucleoside transporter yegT| Length = 425 Score = 27.7 bits (60), Expect = 8.7 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -1 Query: 183 WFAPLGLWRYYSGERTGRDGLGWGY 109 WF PL LW SG G +GW Y Sbjct: 21 WFVPLWLWLSKSGFSAGE--IGWSY 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,645,617 Number of Sequences: 219361 Number of extensions: 331375 Number of successful extensions: 814 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 775 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 814 length of database: 80,573,946 effective HSP length: 40 effective length of database: 71,799,506 effective search space used: 1723188144 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)