ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y751_OCEIH (Q8ES91) Putative adenine deaminase OB0751 (EC 3.5.4.... 30 1.5
2PDXH_CAEEL (Q20939) Putative pyridoxamine 5'-phosphate oxidase (... 29 3.3
3MODC2_AZOVI (Q44538) Molybdenum import ATP-binding protein modC ... 28 4.3
4SAHH_BDEBA (Q6MNC0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adeno... 28 4.3
5MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4... 28 7.3
6CEMA_WHEAT (P69373) Chloroplast envelope membrane protein 27 9.5
7CEMA_AEGTA (P69375) Chloroplast envelope membrane protein (Fragm... 27 9.5
8CEMA_AEGCR (P69374) Chloroplast envelope membrane protein (Fragm... 27 9.5

>Y751_OCEIH (Q8ES91) Putative adenine deaminase OB0751 (EC 3.5.4.2) (Adenase)|
           (Adenine aminase)
          Length = 579

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 204 AYSALFPVVLV*LSTPDVYVLRNNMVIIKGGYILDLYHVGAVVEHMPPVLFVSLETTP 31
           +YSA   ++++  S  D+++  N +  IKGG I  L + G ++  +P  L  SL   P
Sbjct: 462 SYSASGDIIIIGNSKKDIFIAWNRLKEIKGGII--LVNNGEILTEIPLTLGGSLPNEP 517



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>PDXH_CAEEL (Q20939) Putative pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)|
           (PNP/PMP oxidase) (PNPOx)
          Length = 253

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 127 YHIIPKYVHIWSAQSNQHH 183
           YH+IP+Y   W  QS++ H
Sbjct: 216 YHLIPRYFEFWQGQSDRLH 234



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>MODC2_AZOVI (Q44538) Molybdenum import ATP-binding protein modC 2 (EC 3.6.3.29)|
          Length = 358

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 69  CARPRHQHDINQVYNRPLLLPYYSEVRTHLECSVKPAPQGR 191
           C RP HQ  +  V     LLP+  +VR +LE   +  P+ R
Sbjct: 70  CFRPPHQRSLGYVRQASELLPHL-DVRANLEFGYRRIPRAR 109



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>SAHH_BDEBA (Q6MNC0) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 460

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 135 NMVIIKGGYILDLYHVGAVVEHMPPVLFVSLETTPSVH 22
           NM++  GG + ++ H     + M  ++ +S ETT  VH
Sbjct: 153 NMILDDGGDLTNMMHEPRFAKEMKKIIGISEETTTGVH 190



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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
            zinc finger protein-related factor) (Histone
            acetyltransferas
          Length = 2073

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 350  EDGEAEHREGEDQGQVGQEHQGRVRPRKCSQGARSQ 243
            E+ E E  E E++ + G+E +G     K   GA+SQ
Sbjct: 1353 EEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQ 1388



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>CEMA_WHEAT (P69373) Chloroplast envelope membrane protein|
          Length = 230

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 116 AVIYLIYIMLVPWS-STCPRCCLFLW 42
           +++YL++I+L+PW  S+    CL LW
Sbjct: 9   SLLYLVFIVLLPWGVSSSFNKCLELW 34



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>CEMA_AEGTA (P69375) Chloroplast envelope membrane protein (Fragment)|
          Length = 151

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 116 AVIYLIYIMLVPWS-STCPRCCLFLW 42
           +++YL++I+L+PW  S+    CL LW
Sbjct: 9   SLLYLVFIVLLPWGVSSSFNKCLELW 34



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>CEMA_AEGCR (P69374) Chloroplast envelope membrane protein (Fragment)|
          Length = 151

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 116 AVIYLIYIMLVPWS-STCPRCCLFLW 42
           +++YL++I+L+PW  S+    CL LW
Sbjct: 9   SLLYLVFIVLLPWGVSSSFNKCLELW 34


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,605,821
Number of Sequences: 219361
Number of extensions: 977353
Number of successful extensions: 2310
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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