>ARGC_XYLFT (Q87EL1) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 327

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 66  VSLT*NLWLNQMFHRQHTFRIYTTDFGSQPI 158
           ++LT NLWL +   R+H   +Y T + + P+
Sbjct: 219 ITLTANLWLQRPLTREHIKTLYATRYANDPL 249

>GLND_NITWN (Q3SWE0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 925

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 50  EDRIHRVLDMKPVVKPNVS*ATY-LQDLHNRFWFSTY 157
           E+R HR    + +V+PNV      L+DLH  FW + Y
Sbjct: 222 EERHHRAGQSRYLVEPNVKDGKGGLRDLHTLFWIAKY 258

>ARGC_XYLFA (Q9PEM6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 333

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 66  VSLT*NLWLNQMFHRQHTFRIYTTDFGSQPI 158
           ++LT NLWL +   R+H   +Y T + + P+
Sbjct: 219 ITLTANLWLQRPLTREHIKILYATRYANDPL 249

>YHCT_BACSU (P54604) Hypothetical RNA pseudouridine synthase yhcT (EC 5.4.99.-)|
           (RNA-uridine isomerase) (RNA pseudouridylate synthase)
          Length = 302

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 218 VLLQRLLVNRMGRVYTVIKFNRLRTKIGCVNP 123
           +L Q+L    + R YT I   +LRTK G +NP
Sbjct: 156 ILDQQLEKKTLKRTYTAIAEGKLRTKKGTINP 187

>GALE1_PEA (Q43070) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 350

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 255 GTQRGSTILKMVCALAKTIGKQ 190
           GT RGS++L+MV A  K  GK+
Sbjct: 272 GTGRGSSVLEMVAAFEKASGKK 293


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,305,780
Number of Sequences: 219361
Number of extensions: 771854
Number of successful extensions: 1316
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)