>TAF7_YEAST (Q05021) Transcription initiation factor TFIID subunit 7|
           (TBP-associated factor 7) (TBP-associated factor 67 kDa)
           (TAFII-67)
          Length = 590

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +1

Query: 76  RPKCKHEFRQSDHSKYGREDG*KKSLQRECRVLPSSRSRETSKNKHRALPLLLVAVRCPG 255
           +PK K   ++   S  G+E   K SL+ +  +    ++ E  K  H+A  L L  +R PG
Sbjct: 42  KPKLKINLKKKKESADGKEK--KNSLKLKLNL---KKNEEPVKKIHKAPKLRLKPIRIPG 96

Query: 256 EGLEAESN 279
           E  ++E++
Sbjct: 97  EAYDSEAS 104

>NU5M_TRIRE (Q8SHP7) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3)|
          Length = 692

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -3

Query: 162 FSL*AFFLPIFSSVLAMV---RLPKLVFAFGPTN 70
           F L  FFL IF SVL++V    +PK+V  F  TN
Sbjct: 509 FKLLPFFLTIFFSVLSIVYYEYMPKVVVDFNLTN 542

>PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC 5.2.1.8)|
           (Peptidyl-prolyl isomerase G) (PPIase G) (Rotamase G)
           (Cyclophilin G) (Clk-associating RS-cyclophilin)
           (CARS-cyclophilin) (CARS-Cyp) (SR-cyclophilin) (SRcyp)
           (SR-cyp) (CASP10)
          Length = 754

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +1

Query: 103 QSDHSKYGREDG*KKSLQRECRVLP-----SSRSRETSKNKHRA 219
           + DHSK   +D   +S  REC +       +SR+RE S+++ R+
Sbjct: 529 EHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRS 572

>DNLJ_THEFI (Q9ZHI0) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase|
           [NAD+]) (Tfi DNA ligase)
          Length = 670

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 190 RETSKNKHRALPLLLVAVRCPGEGLEAESNLPR 288
           R+  ++KHR L  LL A+  PG G     NL R
Sbjct: 496 RQIEESKHRGLERLLYALGLPGVGEVLARNLAR 528

>IFRH_ARATH (P52577) Isoflavone reductase homolog P3 (EC 1.3.1.-)|
          Length = 310

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 47  PSVLNKLKFVGPNANTSLGNRTIASTEEKMGR 142
           P  LNK+ ++ P+ NT   N  +   E+K+G+
Sbjct: 208 PRTLNKILYIKPSNNTLSMNEIVTLWEKKIGK 239


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,433,261
Number of Sequences: 219361
Number of extensions: 919335
Number of successful extensions: 2288
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2287
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)