>ref|XM_507134.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1066_B03.125 mRNA
          Length = 3327

 Score =  103 bits (52), Expect = 3e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 149  gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 207
            |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3171 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3114

                                
Query: 208  aaacaccgagctcttccttt 227
            ||||||||||||||||||||
Sbjct: 3113 aaacaccgagctcttccttt 3094



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                        
Query: 13   tatatttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatt 72
            |||||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||
Sbjct: 3303 tatatttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaatt 3244

                            
Query: 73   tgtcggcccaaatgca 88
              || |||||||||||
Sbjct: 3243 cctcagcccaaatgca 3228

>ref|XM_480154.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3327

 Score =  103 bits (52), Expect = 3e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 149  gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 207
            |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3171 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3114

                                
Query: 208  aaacaccgagctcttccttt 227
            ||||||||||||||||||||
Sbjct: 3113 aaacaccgagctcttccttt 3094



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                        
Query: 13   tatatttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatt 72
            |||||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||
Sbjct: 3303 tatatttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaatt 3244

                            
Query: 73   tgtcggcccaaatgca 88
              || |||||||||||
Sbjct: 3243 cctcagcccaaatgca 3228

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  103 bits (52), Expect = 3e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                           
Query: 149     gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 207
               |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3136305 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3136248

                                   
Query: 208     aaacaccgagctcttccttt 227
               ||||||||||||||||||||
Sbjct: 3136247 aaacaccgagctcttccttt 3136228



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                           
Query: 13      tatatttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatt 72
               |||||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||
Sbjct: 3136437 tatatttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaatt 3136378

                               
Query: 73      tgtcggcccaaatgca 88
                 || |||||||||||
Sbjct: 3136377 cctcagcccaaatgca 3136362

>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1066_B03
          Length = 115339

 Score =  103 bits (52), Expect = 3e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                         
Query: 149   gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 207
             |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 95789 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 95732

                                 
Query: 208   aaacaccgagctcttccttt 227
             ||||||||||||||||||||
Sbjct: 95731 aaacaccgagctcttccttt 95712



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                         
Query: 13    tatatttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatt 72
             |||||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||
Sbjct: 95921 tatatttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaatt 95862

                             
Query: 73    tgtcggcccaaatgca 88
               || |||||||||||
Sbjct: 95861 cctcagcccaaatgca 95846

>dbj|AK099134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050E19, full
            insert sequence
          Length = 3326

 Score =  103 bits (52), Expect = 3e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 149  gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 207
            |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3170 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3113

                                
Query: 208  aaacaccgagctcttccttt 227
            ||||||||||||||||||||
Sbjct: 3112 aaacaccgagctcttccttt 3093



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                        
Query: 13   tatatttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatt 72
            |||||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||
Sbjct: 3302 tatatttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaatt 3243

                            
Query: 73   tgtcggcccaaatgca 88
              || |||||||||||
Sbjct: 3242 cctcagcccaaatgca 3227

>dbj|AK070325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A13, full
            insert sequence
          Length = 3347

 Score =  103 bits (52), Expect = 3e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 149  gcctacaaagagaatgccgggtgcttcctt-cttccaggagcagggagacttcaaaaaac 207
            |||||||| ||||||||||||||||||||| ||||||||||||||| |||||| ||||||
Sbjct: 3191 gcctacaatgagaatgccgggtgcttccttccttccaggagcaggg-gacttc-aaaaac 3134

                                
Query: 208  aaacaccgagctcttccttt 227
            ||||||||||||||||||||
Sbjct: 3133 aaacaccgagctcttccttt 3114



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                        
Query: 13   tatatttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatt 72
            |||||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||
Sbjct: 3323 tatatttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaatt 3264

                            
Query: 73   tgtcggcccaaatgca 88
              || |||||||||||
Sbjct: 3263 cctcagcccaaatgca 3248

>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence
          Length = 138518

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 71/78 (91%), Gaps = 2/78 (2%)
 Strand = Plus / Minus

                                                                          
Query: 149    gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagac-ttcaaaaaa 206
              ||||||||||||||||||  ||||||||||| |||||||||||||| ||| || ||||||
Sbjct: 106729 gcctacaaagagaatgccaagtgcttccttcgttccaggagcagggggacattgaaaaaa 106670

                                
Query: 207    caaacaccgagctcttcc 224
              ||||| ||||||||||||
Sbjct: 106669 caaactccgagctcttcc 106652

>gb|BT017514.1| Zea mays clone EL01N0419B06.c mRNA sequence
          Length = 522

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 43/47 (91%), Gaps = 2/47 (4%)
 Strand = Plus / Plus

                                                          
Query: 149 gcctacaaagagaatgccgggtgc-ttccttc-ttccaggagcaggg 193
           |||||||||||||||| ||||||| ||||||| ||||| ||||||||
Sbjct: 119 gcctacaaagagaatgacgggtgctttccttcgttccacgagcaggg 165



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 201 aaaaaacaaacaccgagctctt 222
           ||||||||||||||||||||||
Sbjct: 181 aaaaaacaaacaccgagctctt 202

>gb|AY108535.1| Zea mays PCO135925 mRNA sequence
          Length = 1700

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 43/47 (91%), Gaps = 2/47 (4%)
 Strand = Plus / Minus

                                                           
Query: 149  gcctacaaagagaatgccgggtgc-ttccttc-ttccaggagcaggg 193
            |||||||||||||||| ||||||| ||||||| ||||| ||||||||
Sbjct: 1550 gcctacaaagagaatgacgggtgctttccttcgttccacgagcaggg 1504



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 201  aaaaaacaaacaccgagctctt 222
            ||||||||||||||||||||||
Sbjct: 1488 aaaaaacaaacaccgagctctt 1467

>gb|AC107698.8| Mus musculus chromosome 1, clone RP24-496A5, complete sequence
          Length = 159888

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gttctcaacaagctaaaatt 72
              ||||||||||||||||||||
Sbjct: 147046 gttctcaacaagctaaaatt 147027

>emb|CR318646.27| Zebrafish DNA sequence from clone DKEY-83F18 in linkage group 22,
             complete sequence
          Length = 224271

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 72185 ttaggtgtccgggagaaggc 72166

>emb|BX664743.23| Zebrafish DNA sequence from clone DKEY-11D20 in linkage group 22,
             complete sequence
          Length = 180012

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 14054 ttaggtgtccgggagaaggc 14073

>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5,
              complete sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    ttaggtgtccgggagaaggc 261
              ||||||||||||||||||||
Sbjct: 165287 ttaggtgtccgggagaaggc 165306

>emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 in linkage group 8,
              complete sequence
          Length = 232595

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    ttaggtgtccgggagaaggc 261
              ||||||||||||||||||||
Sbjct: 192766 ttaggtgtccgggagaaggc 192785

>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a
              programmed cell death 2 (PDCD2) pseudogene, the 5' end of
              the gene for a novel C2H2 type zinc finger protein and two
              CpG islands, complete sequence
          Length = 184302

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    ccttcttccaggagcagggagact 198
              |||||| |||||||||||||||||
Sbjct: 181615 ccttctcccaggagcagggagact 181592

>emb|AL035669.43|HS885L7 Human DNA sequence from clone RP5-885L7 on chromosome 20q13.2-13.33
             Contains the 3' end of the NTSR1 gene for high affinity
             neurotensin receptor 1, the C20orf20 gene, the OGFR gene
             for opioid growth factor receptor, the COL9A3 gene for
             collagen IX alpha 3, the C20orf143 gene, the TCFL5 gene
             for basic helix-loop-helix transcription factor-like 5,
             the ARF4P2 gene for ADP-ribosylation factor 4 pseudogene
             2, the 3' end of the DATF1 gene for death associated
             transcription factor 1, two novel genes and seven CpG
             islands, complete sequence
          Length = 160241

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 246   gtgtccgggagaaggcctggaagc 269
             ||||| ||||||||||||||||||
Sbjct: 27939 gtgtctgggagaaggcctggaagc 27962

>emb|AL591172.3| Zebrafish DNA sequence from clone BUSM1-48C11 Contains two novel genes,
             two novel genes for a proteins similar to MHC class II
             alpha and beta chain, the putative novel transposon LDR1
             and three CpG islands, complete sequence
          Length = 106049

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 79439 ttaggtgtccgggagaaggc 79420

>emb|CR293521.11| Zebrafish DNA sequence from clone CH211-152F22 in linkage group 12,
             complete sequence
          Length = 152631

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 22495 ttaggtgtccgggagaaggc 22514

>emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, complete sequence
          Length = 177056

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 22439 ttaggtgtccgggagaaggc 22420

>emb|BX119905.13| Zebrafish DNA sequence from clone CH211-209H17, complete sequence
          Length = 50366

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  ttaggtgtccgggagaaggc 261
            ||||||||||||||||||||
Sbjct: 3014 ttaggtgtccgggagaaggc 2995

>emb|BX323555.10| Zebrafish DNA sequence from clone DKEY-163M14 in linkage group 21,
              complete sequence
          Length = 180416

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    ttaggtgtccgggagaaggc 261
              ||||||||||||||||||||
Sbjct: 109378 ttaggtgtccgggagaaggc 109359

>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22,
             complete sequence
          Length = 165445

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 64351 ttaggtgtccgggagaaggc 64332

>emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 in linkage group 16,
             complete sequence
          Length = 195432

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 47392 ttaggtgtccgggagaaggc 47411

>emb|BX927258.8| Zebrafish DNA sequence from clone CH211-279M15 in linkage group 20,
             complete sequence
          Length = 146407

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 91527 ttaggtgtccgggagaaggc 91546

>emb|BX088560.7| Zebrafish DNA sequence from clone DKEY-237O15 in linkage group 10,
             complete sequence
          Length = 156486

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ttaggtgtccgggagaaggc 261
             ||||||||||||||||||||
Sbjct: 24363 ttaggtgtccgggagaaggc 24344

>emb|AJ504425.1|CGR504425 Cricetulus griseus partial mRNA for multidrug resistance-associated
           protein 1 (abcc1 gene)
          Length = 683

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 ggagaaggcctggaagctga 272
           ||||||||||||||||||||
Sbjct: 265 ggagaaggcctggaagctga 284

>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence
          Length = 178509

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     gttctcaacaagctaaaatt 72
              ||||||||||||||||||||
Sbjct: 177459 gttctcaacaagctaaaatt 177478

>emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 in linkage group 25,
              complete sequence
          Length = 196037

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    ttaggtgtccgggagaaggc 261
              ||||||||||||||||||||
Sbjct: 185657 ttaggtgtccgggagaaggc 185676

>emb|BX936450.6| Zebrafish DNA sequence from clone CH211-232I12 in linkage group 17,
              complete sequence
          Length = 167918

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    ttaggtgtccgggagaaggc 261
              ||||||||||||||||||||
Sbjct: 117478 ttaggtgtccgggagaaggc 117459

>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete
             sequence
          Length = 216611

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aatgtccatcagttctcaac 61
             ||||||||||||||||||||
Sbjct: 45954 aatgtccatcagttctcaac 45973


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,441,736
Number of Sequences: 3902068
Number of extensions: 3441736
Number of successful extensions: 70332
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70237
Number of HSP's gapped (non-prelim): 81
length of query: 314
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 292
effective length of database: 17,147,199,772
effective search space: 5006982333424
effective search space used: 5006982333424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)