>ref|NM_106529.2| Arabidopsis thaliana unknown protein AT1G78815 mRNA, complete cds
          Length = 1003

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 103 gaaaagaaacaattctacattc 124
           ||||||||||||||||||||||
Sbjct: 830 gaaaagaaacaattctacattc 851

>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence
          Length = 90425

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 103   gaaaagaaacaattctacattc 124
             ||||||||||||||||||||||
Sbjct: 45973 gaaaagaaacaattctacattc 45994

>gb|AC110904.8| Mus musculus chromosome 7, clone RP24-174I24, complete sequence
          Length = 150036

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    gaaaagaaacaattctacatt 123
              |||||||||||||||||||||
Sbjct: 126448 gaaaagaaacaattctacatt 126428

>gb|AC158572.3| Mus musculus chromosome 7, clone RP24-402J3, complete sequence
          Length = 171722

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   gaaaagaaacaattctacatt 123
             |||||||||||||||||||||
Sbjct: 57043 gaaaagaaacaattctacatt 57023

>emb|BX510911.10| Zebrafish DNA sequence from clone CH211-150K17 in linkage group 10,
             complete sequence
          Length = 140584

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    actgtcatctcacagcaaaag 79
             |||||||||||||||||||||
Sbjct: 40944 actgtcatctcacagcaaaag 40964

>gb|AY086257.1| Arabidopsis thaliana clone 230925 mRNA, complete sequence
          Length = 1004

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 103 gaaaagaaacaattctacatt 123
           |||||||||||||||||||||
Sbjct: 831 gaaaagaaacaattctacatt 851

>gb|AY786358.1| Opisthorchis viverrini clone pOVCRA26-3 unknown sequence
          Length = 280

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 28 tggacatactgaagatatca 47
          ||||||||||||||||||||
Sbjct: 54 tggacatactgaagatatca 73

>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence
          Length = 170539

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 251   gctgagcatcgaaagtcaaggcaa 274
             |||||||||| |||||||||||||
Sbjct: 89082 gctgagcatccaaagtcaaggcaa 89105

>gb|AY735112.1| Streptomyces hygroscopicus mannopeptimycin biosynthetic gene cluster,
             complete sequence
          Length = 48200

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   gacaccggaggcgctgcggg 223
             ||||||||||||||||||||
Sbjct: 25265 gacaccggaggcgctgcggg 25284

>gb|AC125274.12| Mus musculus chromosome 15, clone RP24-157F9, complete sequence
          Length = 188060

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 251  gctgagcatcgaaagtcaaggcaa 274
            |||||||||| |||||||||||||
Sbjct: 6748 gctgagcatccaaagtcaaggcaa 6771

>emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5,
            complete sequence
          Length = 147626

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   actgtcatctcacagcaaaa 78
            ||||||||||||||||||||
Sbjct: 2762 actgtcatctcacagcaaaa 2781

>emb|CR848835.7| Zebrafish DNA sequence from clone DKEY-71G12 in linkage group 15,
             complete sequence
          Length = 216994

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    actgtcatctcacagcaaaa 78
             ||||||||||||||||||||
Sbjct: 10784 actgtcatctcacagcaaaa 10803

>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
              sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 141258 actgtcatctcacagcaaaa 141277

>emb|AL592150.7| Human DNA sequence from clone XX-0780 on chromosome 1q21.1-21.3
            Contains the SNAPAP gene for SNAP-associated protein and
            the 3' end of the ILF2 gene for interleukin enhancer
            binding factor 2, 45kDa, complete sequence
          Length = 15450

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  tgctgccatttacattcttg 301
            ||||||||||||||||||||
Sbjct: 9791 tgctgccatttacattcttg 9810

>emb|BX294660.18| Zebrafish DNA sequence from clone CH211-234D4 in linkage group 23,
              complete sequence
          Length = 200676

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 151421 actgtcatctcacagcaaaa 151440

>emb|BX510928.5| Zebrafish DNA sequence from clone DKEY-190G11 in linkage group 8,
              complete sequence
          Length = 197947

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 149669 actgtcatctcacagcaaaa 149650

>gb|AC113933.2| Homo sapiens chromosome 3 clone RP11-1006P7, complete sequence
          Length = 173769

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     agatatcaacaactttgaaa 59
              ||||||||||||||||||||
Sbjct: 119019 agatatcaacaactttgaaa 119000

>emb|BX547997.9| Zebrafish DNA sequence from clone CH211-198F16 in linkage group 2,
             complete sequence
          Length = 175234

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    actgtcatctcacagcaaaa 78
             ||||||||||||||||||||
Sbjct: 72268 actgtcatctcacagcaaaa 72287

>gb|AC153134.5| Mus musculus BAC clone RP24-202N2 from chromosome 13, complete sequence
          Length = 177669

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     ctgtcatctcacagcaaaag 79
              ||||||||||||||||||||
Sbjct: 134654 ctgtcatctcacagcaaaag 134635

>emb|CR385466.1| Gallus gallus finished cDNA, clone ChEST461e7
          Length = 957

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 70  acagcaaaagctacaggcac 89
           ||||||||||||||||||||
Sbjct: 808 acagcaaaagctacaggcac 789

>gb|AC155833.10| Mus musculus 10 BAC RP24-405O10 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 176338

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     tgtcatctcacagcaaaagc 80
              ||||||||||||||||||||
Sbjct: 149646 tgtcatctcacagcaaaagc 149665

>gb|AC073897.6|AC073897 Homo sapiens chromosome 15 clone RP11-718O11 map 15q21.1, complete
             sequence
          Length = 180538

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 285   tgccatttacattcttgggtctgaagga 312
             |||||||| ||||||||||| |||||||
Sbjct: 98140 tgccattttcattcttgggtatgaagga 98167

>emb|BX324188.7| Zebrafish DNA sequence from clone DKEY-85A20 in linkage group 13,
              complete sequence
          Length = 237686

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 181706 actgtcatctcacagcaaaa 181687

>emb|BX247887.6| Zebrafish DNA sequence from clone CH211-142L10, complete sequence
          Length = 143903

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    actgtcatctcacagcaaaa 78
             ||||||||||||||||||||
Sbjct: 53928 actgtcatctcacagcaaaa 53947

>gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complete sequence
          Length = 165373

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    atatcaacaactttgaaact 61
             ||||||||||||||||||||
Sbjct: 22621 atatcaacaactttgaaact 22640

>emb|BX548006.10| Zebrafish DNA sequence from clone DKEY-127P11, complete sequence
          Length = 158134

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 117006 actgtcatctcacagcaaaa 116987

>gb|AC154386.2| Mus musculus BAC clone RP23-27A13 from 13, complete sequence
          Length = 170110

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    gtcatctcacagcaaaagct 81
             ||||||||||||||||||||
Sbjct: 99343 gtcatctcacagcaaaagct 99324

>emb|CR812484.8| Zebrafish DNA sequence from clone DKEY-83B16 in linkage group 18,
              complete sequence
          Length = 149153

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 105874 actgtcatctcacagcaaaa 105893

>emb|CR376826.12| Zebrafish DNA sequence from clone DKEYP-78F1 in linkage group 20,
             complete sequence
          Length = 153344

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    actgtcatctcacagcaaaa 78
             ||||||||||||||||||||
Sbjct: 93871 actgtcatctcacagcaaaa 93890

>emb|BX936376.6| Zebrafish DNA sequence from clone CH211-82K12 in linkage group 18,
             complete sequence
          Length = 107736

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    actgtcatctcacagcaaaa 78
             ||||||||||||||||||||
Sbjct: 29603 actgtcatctcacagcaaaa 29622

>emb|AL929274.7| Zebrafish DNA sequence from clone CH211-79M20 in linkage group 22,
              complete sequence
          Length = 169459

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 147509 actgtcatctcacagcaaaa 147490

>gb|AC115763.10| Mus musculus chromosome 15, clone RP23-64J7, complete sequence
          Length = 243676

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    caaggcaatctgtcctgctg 286
              ||||||||||||||||||||
Sbjct: 160831 caaggcaatctgtcctgctg 160850

>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     gctgagcatcgaaagtcaag 270
               ||||||||||||||||||||
Sbjct: 1334157 gctgagcatcgaaagtcaag 1334176

>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5, complete
              sequence
          Length = 227454

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     actgtcatctcacagcaaaa 78
              ||||||||||||||||||||
Sbjct: 149961 actgtcatctcacagcaaaa 149942

>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete
             sequence
          Length = 176581

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    gtcatctcacagcaaaagct 81
             ||||||||||||||||||||
Sbjct: 13951 gtcatctcacagcaaaagct 13970

>gb|AC154662.2| Mus musculus BAC clone RP24-279F20 from chromosome 13, complete
             sequence
          Length = 170831

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    gtcatctcacagcaaaagct 81
             ||||||||||||||||||||
Sbjct: 19637 gtcatctcacagcaaaagct 19618


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,454,827
Number of Sequences: 3902068
Number of extensions: 3454827
Number of successful extensions: 57157
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57096
Number of HSP's gapped (non-prelim): 61
length of query: 315
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 293
effective length of database: 17,147,199,772
effective search space: 5024129533196
effective search space used: 5024129533196
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)