Clone Name | rbastl53d06 |
---|---|
Clone Library Name | barley_pub |
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/38 (34%), Positives = 26/38 (68%) Frame = -2 Query: 409 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 296 +NG+D+ A+P++ AQ++ +D+D++D S +VS Sbjct: 567 TNGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVS 604
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 29.3 bits (64), Expect = 3.7 Identities = 12/38 (31%), Positives = 26/38 (68%) Frame = -2 Query: 409 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 296 +NG+D+ A+P++ AQ++ +D+D++ PS + + S Sbjct: 565 ANGSDDGAQPSTSTAQEQDDVLIVDSDEEGPSNSTDCS 602
>FADB_SHEON (Q8EKR9) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA| hydratase (EC 4.2.1.17); Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2. Length = 716 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +2 Query: 89 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 226 KP+ FC MH N V + PL+E + ++ ET+ V+ +S+ KT I Sbjct: 442 KPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPI 489
>YAD7_YEAST (P39728) Hypothetical 30.5 kDa protein in PYK1-SNC1 intergenic| region Length = 267 Score = 28.9 bits (63), Expect = 4.9 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +3 Query: 171 LQKLSM-FYSYPHNV*KQPFLLSP*QAKSTIAQPIMDIKSPQIDTSYAWEGSSLSVSICS 347 LQKL Y P + QP LL K I + K T Y +S+ V++CS Sbjct: 16 LQKLDTNVYFGPCEILTQPILLQYENIKFIIGVNLSTEKIASFYTQYFRNSNSVVVNLCS 75 Query: 348 PTCSS*APSLA 380 PT ++ A A Sbjct: 76 PTTAAVATKKA 86
>SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit (Sodium| channel protein type VII alpha subunit) (Putative voltage-gated sodium channel alpha subunit Nax) (Sodium channel protein, cardiac and skeletal muscle alpha-subunit) Length = 1682 Score = 28.5 bits (62), Expect = 6.4 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +1 Query: 118 KRRQRKTAIGGGKDV*KHCRNSPCSTHILTTYENSHSFYRPSRPK 252 K Q K+ GG K+ K +S CST + E FY R K Sbjct: 851 KEIQSKSGDGGSKEKIKQSSSSECSTVDIAISEEEEMFYGGERSK 895
>MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein| Length = 442 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +3 Query: 3 ESLWATVDKNYNVMDHRH*KNTLETMGPQNLSCSACICQTSSKKNR 140 ES++ T +K YNVM+HRH E M P CQ +S ++ Sbjct: 74 ESVYCTTEK-YNVMEHRHNDMHYECMTP---------CQVTSDSDK 109
>FADB_VIBF1 (Q5E8X6) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA| hydratase (EC 4.2.1.17); Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2. Length = 725 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = +2 Query: 89 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 226 +P+ FC MH N V PL+E + + + +T+ V+ +SQ KT I Sbjct: 442 RPENFCGMHFFNPVHRMPLVEVIRGEKTSQQTIDRVVAYASQMGKTPI 489
>CCPR_YARLI (Q6C0Z6) Cytochrome c peroxidase, mitochondrial precursor (EC| 1.11.1.5) (CCP) Length = 340 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Frame = -3 Query: 117 GRCMQNN*GFGDPW--SPVYFFND 52 GRC + N GF PW SP F ND Sbjct: 227 GRCHKQNSGFEGPWTFSPTMFTND 250 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,933,757 Number of Sequences: 219361 Number of extensions: 1267717 Number of successful extensions: 3525 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3314 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3517 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)