ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl53d05 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 103 bits (256), Expect = 2e-22 Identities = 50/62 (80%), Positives = 53/62 (85%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFGSRLV+IE RI DMN + ALKNRNGPVKMPYMLLYPNTSD EK GLTAMGIPNS+ Sbjct: 816 RFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSI 875 Query: 244 SI 239 SI Sbjct: 876 SI 877
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 89.7 bits (221), Expect = 3e-18 Identities = 44/62 (70%), Positives = 48/62 (77%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RF RLVEIE +++ MN DP LKNRNGP K PYMLLYPNTSD G A GLTA GIPNS+ Sbjct: 802 RFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKG-AAAGLTAKGIPNSI 860 Query: 244 SI 239 SI Sbjct: 861 SI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 84.3 bits (207), Expect = 1e-16 Identities = 41/62 (66%), Positives = 47/62 (75%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RF RLVEIE +++ MN D LKNRNGP + PYMLLYPNTSD G A G+TA GIPNS+ Sbjct: 806 RFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTG-AAAGITAKGIPNSI 864 Query: 244 SI 239 SI Sbjct: 865 SI 866
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 83.6 bits (205), Expect = 2e-16 Identities = 41/62 (66%), Positives = 47/62 (75%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG+RL EIE R++ MNKDP KNR GP PY LLYPNTSD G+ A GL+A GIPNS+ Sbjct: 810 RFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGLSARGIPNSI 868 Query: 244 SI 239 SI Sbjct: 869 SI 870
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 80.9 bits (198), Expect = 1e-15 Identities = 39/62 (62%), Positives = 47/62 (75%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RF +LVEIE ++L+MNKDP LKNR GP PY L++PNTSD G A G+TA GIPNS+ Sbjct: 803 RFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKG-AAEGITARGIPNSI 861 Query: 244 SI 239 SI Sbjct: 862 SI 863
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 70.9 bits (172), Expect = 1e-12 Identities = 34/62 (54%), Positives = 44/62 (70%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG +L EIEK++++ NKD L+NR GP KMPY LLYP++ + GLT GIPNS+ Sbjct: 799 RFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEE-------GLTFRGIPNSI 851 Query: 244 SI 239 SI Sbjct: 852 SI 853
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 70.1 bits (170), Expect = 2e-12 Identities = 35/62 (56%), Positives = 43/62 (69%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG +L EIE++I+ NKD +L+NRNGPVKMPY +L P D GLT GIPNS+ Sbjct: 807 RFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDE------GLTFRGIPNSI 860 Query: 244 SI 239 SI Sbjct: 861 SI 862
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 68.9 bits (167), Expect = 5e-12 Identities = 33/62 (53%), Positives = 43/62 (69%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG +L EIE+++ N D +L+NR GPVKMPY LLYP++ + GLT GIPNS+ Sbjct: 812 RFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEE-------GLTCRGIPNSI 864 Query: 244 SI 239 SI Sbjct: 865 SI 866
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 67.8 bits (164), Expect = 1e-11 Identities = 32/62 (51%), Positives = 44/62 (70%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 +FG++L EIEK++ N D L+NR+GPV+MPY LLYP++ + GLT GIPNS+ Sbjct: 807 KFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKE-------GLTFRGIPNSI 859 Query: 244 SI 239 SI Sbjct: 860 SI 861
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 62.0 bits (149), Expect = 6e-10 Identities = 32/62 (51%), Positives = 39/62 (62%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG +L +IEK+I+ N D L NR+GPV PY LL+P + GLT GIPNSV Sbjct: 807 RFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG-------GLTGKGIPNSV 859 Query: 244 SI 239 SI Sbjct: 860 SI 861
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 62.0 bits (149), Expect = 6e-10 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG L +IE RI+ MN + KNR+GPV +PY LL+P + + GLT GIPNSV Sbjct: 805 RFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSEE-------GLTGKGIPNSV 857 Query: 244 SI 239 SI Sbjct: 858 SI 859
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 61.6 bits (148), Expect = 7e-10 Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALK-NRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNS 248 +FG++L EIE++++ N DP+L+ NR GPV++PY LLYP++ + GLT GIPNS Sbjct: 784 KFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEE-------GLTFRGIPNS 836 Query: 247 VSI 239 +SI Sbjct: 837 ISI 839
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 61.6 bits (148), Expect = 7e-10 Identities = 30/62 (48%), Positives = 42/62 (67%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG++L +IE ++ + N D L+NR GPV+MPY LL P++ + GLT GIPNS+ Sbjct: 803 RFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKE-------GLTFRGIPNSI 855 Query: 244 SI 239 SI Sbjct: 856 SI 857
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 61.6 bits (148), Expect = 7e-10 Identities = 30/62 (48%), Positives = 42/62 (67%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 +FG++L EIE+++ N D +L NR GPV++PY LL+PN+ GLT GIPNS+ Sbjct: 812 KFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSE--------GLTCRGIPNSI 863 Query: 244 SI 239 SI Sbjct: 864 SI 865
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 61.6 bits (148), Expect = 7e-10 Identities = 29/62 (46%), Positives = 44/62 (70%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 +FG++L EIE ++ + N DP+L +R GPV++PY LL+P++ + GLT GIPNS+ Sbjct: 810 KFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKE-------GLTFRGIPNSI 862 Query: 244 SI 239 SI Sbjct: 863 SI 864
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 60.8 bits (146), Expect = 1e-09 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 +FG ++ EIEK I + N D LKNR G VKMPY LL+P++ G+T GIPNSV Sbjct: 805 KFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG-------GVTGRGIPNSV 857 Query: 244 SI 239 SI Sbjct: 858 SI 859
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 60.8 bits (146), Expect = 1e-09 Identities = 31/62 (50%), Positives = 42/62 (67%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFGS+L IE +I N DP+L+NR GPV++PY LL+ ++ + GLT GIPNS+ Sbjct: 810 RFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEE-------GLTFKGIPNSI 862 Query: 244 SI 239 SI Sbjct: 863 SI 864
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 60.1 bits (144), Expect = 2e-09 Identities = 31/62 (50%), Positives = 39/62 (62%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RFG++L +IEK+I+ N + L NR GPV PY LL+P + GLT GIPNSV Sbjct: 806 RFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG-------GLTGKGIPNSV 858 Query: 244 SI 239 SI Sbjct: 859 SI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 58.5 bits (140), Expect = 6e-09 Identities = 28/56 (50%), Positives = 36/56 (64%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGI 257 RFG +L EIEK+++ N D L+NR GP KMPY LLYP++ + GLT GI Sbjct: 693 RFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSEE-------GLTFRGI 741
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 47.4 bits (111), Expect = 1e-05 Identities = 32/61 (52%), Positives = 36/61 (59%) Frame = -2 Query: 421 FGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSVS 242 F +RL EIE I NKD LKNR G +PY L+ P SDA G+T MGIPNS S Sbjct: 888 FTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-FSDA------GVTGMGIPNSTS 940 Query: 241 I 239 I Sbjct: 941 I 941
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 47.0 bits (110), Expect = 2e-05 Identities = 29/61 (47%), Positives = 34/61 (55%) Frame = -2 Query: 421 FGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSVS 242 F +RL EIE I NKD LKNR G +PY L+ P + G+T MGIPNS S Sbjct: 871 FAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDS-------GVTGMGIPNSTS 923 Query: 241 I 239 I Sbjct: 924 I 924
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 43.5 bits (101), Expect = 2e-04 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = -2 Query: 421 FGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSVS 242 F ++ +I +++ + NKD + +NR+G +PY+LL P + N A + MGIPNS+S Sbjct: 874 FQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP--LNGNPMDAKTVMEMGIPNSIS 931 Query: 241 I 239 I Sbjct: 932 I 932
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 40.8 bits (94), Expect = 0.001 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Frame = -2 Query: 403 EIEKRILDMNKDPALKNRNGPVKMPYMLLYP---NTSDANGEKAMGLTAMGIPNSVSI 239 +I +++ + N DP KNR+G +PY+LL P + +D + + MGIPNS+SI Sbjct: 879 KIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 40.4 bits (93), Expect = 0.002 Identities = 26/62 (41%), Positives = 32/62 (51%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 +F RL E E I N +P KNR G +PY LL P + G+T GIPNS+ Sbjct: 842 KFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEP-------GVTGRGIPNSI 894 Query: 244 SI 239 SI Sbjct: 895 SI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 38.5 bits (88), Expect = 0.007 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = -2 Query: 403 EIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSVSI 239 EIE+R N DP+ +NR G +PY L+ P++ G+T G+PNSV+I Sbjct: 856 EIERR----NADPSRRNRCGAGVLPYELMAPSSGP-------GITCRGVPNSVTI 899
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 36.2 bits (82), Expect = 0.033 Identities = 22/61 (36%), Positives = 31/61 (50%) Frame = -2 Query: 421 FGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSVS 242 F + + E+ I N D KNR G +PY LL P++ G+T G+PNS+S Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPP-------GVTCRGVPNSIS 917 Query: 241 I 239 I Sbjct: 918 I 918
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 35.4 bits (80), Expect = 0.056 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = -2 Query: 424 RFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKAMGLTAMGIPNSV 245 RF +L +E I + N + LKNR G + Y LL P + G+T MG+P S+ Sbjct: 842 RFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEH-------GVTGMGVPYSI 894 Query: 244 SI 239 SI Sbjct: 895 SI 896
>CMGA_PIG (P04404) Chromogranin A precursor (CgA) [Contains: Pancreastatin;| Parastatin; WE-14] (Fragment) Length = 446 Score = 32.0 bits (71), Expect = 0.62 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = -1 Query: 401 DREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGEGDGAH 270 DRE P EQGP A+ E +A AVP+ G R E +H Sbjct: 203 DREKGPSAEQGPQAEREEEEEAEAGEKAVPEEEG-PRSEAFDSH 245
>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 449 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +2 Query: 44 LSSPYQHHLRHNHHFPSSTNPW---QLITATTQKPMKSNTIH 160 L+ Y HH H+HH PS +P+ L A P ++ +H Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214
>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (MXBP protein) Length = 487 Score = 30.8 bits (68), Expect = 1.4 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPIAFSPLASDVLG 314 G T+ + RP S Q SP +P + G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 30.8 bits (68), Expect = 1.4 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 10/89 (11%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K+ Q T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSP 278 G T+ + RP S Q SP Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASP 311
>TRH_CARAU (Q5KT10) Thyroliberin precursor [Contains: Prothyroliberin;| Thyroliberin (Thyrotropin-releasing hormone) (TRH) (Thyrotropin-releasing factor) (TRF) (TSH-releasing factor) (Protirelin)] Length = 231 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 401 DREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGEGDGAH-RHGHPQQRLHL 237 ++ P Q PG +E ++A QH G++ E D A R HP +RL L Sbjct: 67 EKRQHPGKRQHPGKREDTDYEDEAAALQKRQHPGKREEEEDSARLRRQHPGKRLSL 122
>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (HB16) Length = 487 Score = 30.4 bits (67), Expect = 1.8 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPIAFSPLASDVLG 314 G T+ + RP S Q SP +P G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323
>RS5_GLOVI (Q7NEG9) 30S ribosomal protein S5| Length = 223 Score = 30.0 bits (66), Expect = 2.4 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -1 Query: 419 RQPAGGDREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGEGDGAHRHG 261 +Q G R P GPG PE+A ED + + R+RG G GA R G Sbjct: 4 QQQRGRGRGRGPGGPGGPGGPGPEQAPEDPDRESGGE---RRRGRGRGAGRGG 53
>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (Ca(v)3.3) Length = 2223 Score = 29.6 bits (65), Expect = 3.1 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 8/84 (9%) Frame = -1 Query: 416 QPAGGDREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGEGDG---AHRHGHPQQR 246 +P + E+ E+G GA+ E A ++ A P H G AHRH H ++ Sbjct: 997 KPPSAEHESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHIHHGPHLAHRHRHHRRT 1056 Query: 245 LHLS*AWS-----LFPSFGSRPSA 189 L L S L P+ G+ P A Sbjct: 1057 LSLDNRDSVDLAELVPAVGAHPRA 1080
>SMG7_MOUSE (Q5RJH6) Protein SMG7 (SMG-7 homolog) (EST1-like protein C)| Length = 1138 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +3 Query: 243 ETLLGMPMAVSPIAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLFMSRIRFSISTSRLPN 422 E + P + P PLAS + G S + P +S S F+S FS++ R PN Sbjct: 889 ELIFSNPPDLYPALLGPLAS-LPGRSLFKSLLEKPSELMSHSSSFLSLTGFSVNQERYPN 947
>ZNF18_RAT (Q642B9) Zinc finger protein 18 (Zinc finger protein 535)| Length = 556 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 9/49 (18%) Frame = -1 Query: 377 EQGPGAQEPERAREDALHAAVPQHVGRQ---------RGEGDGAHRHGH 258 +Q PG P+ A D + P H G + +GEG GAH H Sbjct: 321 DQAPGEAPPQTALSDFFGESEPHHFGGESVPEALENLQGEGTGAHLFPH 369
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -1 Query: 425 EVRQPAGGDREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGE-GDGAHRHGHPQ 252 + R+P G +EA+ E G + +ARE L +RG+ GD RH H Q Sbjct: 881 DARRPWAGSQEAELSREGPYGRESDHQAREGGLEPPGFWEGEAERGKAGDPHRRHAHRQ 939
>RILP_HUMAN (Q96NA2) Rab-interacting lysosomal protein| Length = 401 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -1 Query: 362 AQEPERAREDALHAAVPQHVGRQRGE-GDGAHRHG 261 AQ+ ER R+ AA PQ R RG+ G H+HG Sbjct: 172 AQDRERERQQPGEAATPQAKERARGQAGRPGHQHG 206
>SPI1_SOLTU (P58514) Serine protease inhibitor 1 precursor (PSPI-21)| (PSPI-21-6.3) [Contains: Serine protease inhibitor 1 chain A; Serine protease inhibitor 1 chain B] Length = 221 Score = 29.3 bits (64), Expect = 4.0 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPIAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP + +P A+ V Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein| ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399) Length = 331 Score = 29.3 bits (64), Expect = 4.0 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +2 Query: 44 LSSPYQHHLRHNHHFPSS 97 +SSP+ HH H+HH P + Sbjct: 56 ISSPHHHHHHHHHHHPQT 73
>SPI2_SOLTU (P58515) Serine protease inhibitor 2 (PSPI-21) (PSPI-21-5.2)| [Contains: Serine protease inhibitor 2 chain A; Serine protease inhibitor 2 chain B] Length = 186 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPIAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP + +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 41 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 96
>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) Length = 487 Score = 28.9 bits (63), Expect = 5.3 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPIAFSPLASDVLG 314 G + + RP S Q SP +P + G Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>SPI7_SOLTU (P30941) Serine protease inhibitor 7 precursor (PIG) (PIGEN1)| (Allergen Sola t 4) (STPIB) (STPIA) (pKEN14-28) (pF4) Length = 221 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPIAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP + +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>SPI6_SOLTU (Q41433) Probable serine protease inhibitor 6 precursor (AM66)| Length = 221 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPIAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP + +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal| delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal protoxin) (79 kDa crystal protein) Length = 706 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 137 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 229 P+ +NTI PI+ RTD +RKK T+ + Sbjct: 74 PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104
>TRUB_GLOVI (Q7MBB8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +3 Query: 228 CSAQMETLLGMPMAVSPIAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLFMSRIRFSIST 407 C A++ +LG P A+ VL + G T RFLS G ++ + +RF +ST Sbjct: 18 CIARLRRVLGERRIGHGGTLDPAATGVLPVAV--GRATRLLRFLSEGKVYRATVRFGLST 75
>NFL_BOVIN (P02548) Neurofilament triplet L protein (68 kDa neurofilament| protein) (Neurofilament light polypeptide) (NF-L) (Micro glutamic acid-rich protein) Length = 554 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -1 Query: 410 AGGDREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGEGDGA 273 A + EA+ E+ GAQE E A+EDA A + GEG+ A Sbjct: 488 AEAEAEAEAEAEEEEGAQEEEAAKEDAEEAK-----EEEGGEGEEA 528
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -1 Query: 425 EVRQPAGGDREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGE-GDGAHRHGHPQ 252 + R+P G +EA+ E G + ARE +L +RG+ GD RH H Q Sbjct: 879 DARRPWAGSQEAELSREGPYGRESDHHAREGSLEQPGFWEGEAERGKAGDPHRRHVHRQ 937
>SNIP1_HUMAN (Q8TAD8) Smad nuclear-interacting protein 1| Length = 396 Score = 28.5 bits (62), Expect = 6.9 Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Frame = -1 Query: 398 READPRHEQGPGAQE----PERAREDALHAAVPQHVGRQRGEGDGAHRHGHPQQRLHLS* 231 R P H QE P R RED H + R+ D GH QR Sbjct: 96 RNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQR----- 150 Query: 230 AWSLFPSFGSRPSAGHGSVR 171 + RP +G G R Sbjct: 151 -----RTSNERPGSGQGQGR 165
>WEE1_MOUSE (P47810) Wee1-like protein kinase (EC 2.7.10.2)| Length = 646 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -1 Query: 416 QPAGGDREADPRHEQGPGAQEPERAREDALHAAVPQHVGRQRGEGDGA 273 Q AGG E D E+G G+ P ++ A + P R G GD + Sbjct: 103 QAAGGGAEGDSWEEEGFGSSSPVKSPSTAYFLSSPFSPVRCGGPGDAS 150
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 6.9 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Frame = -1 Query: 413 PAG-GDREADPRHEQGPGAQEPERAREDALHAAVPQH-----VGRQRGEGDGAHRHGHP 255 P+G G +A P ++GPG P + P G+ +G+G H +GHP Sbjct: 405 PSGPGTGQARPYAKKGPGGARPGTGGPVGARSGGPGRGAGGGQGQSQGQGQRKHPYGHP 463
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/49 (28%), Positives = 22/49 (44%) Frame = -1 Query: 386 PRHEQGPGAQEPERAREDALHAAVPQHVGRQRGEGDGAHRHGHPQQRLH 240 P H +GP +E + +D H P+ +G D H G P+ + H Sbjct: 353 PEHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKG-PKDKEH 400
>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor| Length = 1459 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 261 PMAVSPIAFSPLASDVLGYSSM*GIFT 341 PM + P FSP+ SDV G M G+ T Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457
>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)| Length = 566 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 8/44 (18%) Frame = +2 Query: 44 LSSPYQHHLRHNHHFPSS--------TNPWQLITATTQKPMKSN 151 + SP Q L+H HH P+S TN +Q+ T + + +++N Sbjct: 1 MMSPAQDKLQHQHHNPNSSSSSSSKMTNVYQVTTPKSPQDLENN 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,649,803 Number of Sequences: 219361 Number of extensions: 1248358 Number of successful extensions: 4511 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 4100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4441 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
