>gb|AC146097.4| Pan troglodytes BAC clone RP43-50K16 from 7, complete sequence
          Length = 183088

 Score = 46.1 bits (23), Expect = 0.057
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 79     ggaagagaaaagaaacaaatgtcctac 105
              ||||||||||||||||||||| |||||
Sbjct: 157646 ggaagagaaaagaaacaaatgccctac 157620

>gb|AC087070.2|AC087070 Homo sapiens chromosome 7 clone RP11-100L10, complete sequence
          Length = 41593

 Score = 46.1 bits (23), Expect = 0.057
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 79    ggaagagaaaagaaacaaatgtcctac 105
             ||||||||||||||||||||| |||||
Sbjct: 28902 ggaagagaaaagaaacaaatgccctac 28928

>gb|AC102603.11| Mus musculus chromosome 14, clone RP23-385I17, complete sequence
          Length = 204565

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 76     tttggaagagaaaagaaacaaa 97
              ||||||||||||||||||||||
Sbjct: 184180 tttggaagagaaaagaaacaaa 184159

>gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosome 14, complete sequence
          Length = 216861

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 76     tttggaagagaaaagaaacaaa 97
              ||||||||||||||||||||||
Sbjct: 191802 tttggaagagaaaagaaacaaa 191823

>gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chromosome 7, complete
             sequence
          Length = 166684

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 81    aagagaaaagaaacaaatgtcctac 105
             ||||||||||||||||||| |||||
Sbjct: 94624 aagagaaaagaaacaaatgacctac 94600

>gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete sequence
          Length = 156399

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 81   aagagaaaagaaacaaatgtcctac 105
            ||||||||||||||||||| |||||
Sbjct: 6182 aagagaaaagaaacaaatgacctac 6158

>emb|AL353663.10| Human DNA sequence from clone RP5-1007B16 on chromosome 6, complete
             sequence
          Length = 77275

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    aaaggggctggaaacagaaaa 62
             |||||||||||||||||||||
Sbjct: 69381 aaaggggctggaaacagaaaa 69401

>gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, complete sequence
          Length = 171035

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    ggaagagaaaagaaacaaatg 99
             |||||||||||||||||||||
Sbjct: 27286 ggaagagaaaagaaacaaatg 27306

>gb|AC140329.3| Mus musculus BAC clone RP23-404O10 from chromosome 14, complete sequence
          Length = 202811

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     ggaagagaaaagaaacaaatgtcc 102
              ||||||||||||||| ||||||||
Sbjct: 139583 ggaagagaaaagaaaaaaatgtcc 139606

>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence
          Length = 169596

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aagaagaagccatggtttgg 80
             ||||||||||||||||||||
Sbjct: 20068 aagaagaagccatggtttgg 20087

>gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosome 18, complete
             sequence
          Length = 158065

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aggggctggaaacagaaaag 63
             ||||||||||||||||||||
Sbjct: 42081 aggggctggaaacagaaaag 42062

>gb|AC090821.13| Homo sapiens chromosome 8, clone CTD-2309H9, complete sequence
          Length = 166843

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   atggaagagctgaaatgttg 134
             ||||||||||||||||||||
Sbjct: 80122 atggaagagctgaaatgttg 80103

>gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosome 6, complete sequence
          Length = 138242

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    aagaaacaaatgtcctaccatacc 111
             |||||| |||||||||||||||||
Sbjct: 95066 aagaaataaatgtcctaccatacc 95043

>gb|AC122317.4| Mus musculus BAC clone RP23-304C21 from 12, complete sequence
          Length = 173567

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     ccatggtttggaagagaaaa 89
              ||||||||||||||||||||
Sbjct: 145376 ccatggtttggaagagaaaa 145395

>gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complete sequence
          Length = 166527

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    aagaaacaaatgtcctaccatacc 111
             |||||| |||||||||||||||||
Sbjct: 95443 aagaaataaatgtcctaccatacc 95466

>emb|AL133546.4| Human DNA sequence from clone RP1-29A6 on chromosome Xq26.2-27.3,
             complete sequence
          Length = 113988

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    ggaagagaaaagaaacaaat 98
             ||||||||||||||||||||
Sbjct: 21045 ggaagagaaaagaaacaaat 21064

>gb|AC092905.10| Homo sapiens 3 BAC RP11-702L6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 151764

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    ggaagagaaaagaaacaaat 98
             ||||||||||||||||||||
Sbjct: 54353 ggaagagaaaagaaacaaat 54372

>gb|AC079906.15| Homo sapiens 12q BAC RP11-618L22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180688

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     ggaagagaaaagaaacaaat 98
              ||||||||||||||||||||
Sbjct: 114239 ggaagagaaaagaaacaaat 114220

>gb|AC021749.6| Homo sapiens chromosome 11, clone RP11-810F22, complete sequence
          Length = 193997

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     aggggctggaaacagaaaag 63
              ||||||||||||||||||||
Sbjct: 128308 aggggctggaaacagaaaag 128327

>dbj|AK035069.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430083H06 product:unclassifiable, full insert
           sequence
          Length = 2568

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  aagaaacaaatgtcctaccatacc 111
           |||||| |||||||||||||||||
Sbjct: 39  aagaaataaatgtcctaccatacc 62

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 75       gtttggaagagaaaagaaacaaat 98
                ||||||||||||||| ||||||||
Sbjct: 18541061 gtttggaagagaaaaaaaacaaat 18541038

>gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete sequence
          Length = 159875

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gaaaagaaacaaatgtccta 104
             ||||||||||||||||||||
Sbjct: 27486 gaaaagaaacaaatgtccta 27505

>gb|AC130416.4| Homo sapiens 3 BAC RP11-771O11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 73190

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ggaagagaaaagaaacaaat 98
             ||||||||||||||||||||
Sbjct: 65311 ggaagagaaaagaaacaaat 65292

>emb|BX322570.4| Zebrafish DNA sequence from clone DKEY-27H10 in linkage group 1,
             complete sequence
          Length = 185032

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   agctgaaatgttgccaaaga 141
             ||||||||||||||||||||
Sbjct: 58010 agctgaaatgttgccaaaga 58029

>emb|AL844217.7| Zebrafish DNA sequence from clone DKEY-218L17, complete sequence
          Length = 246026

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   agctgaaatgttgccaaaga 141
             ||||||||||||||||||||
Sbjct: 22053 agctgaaatgttgccaaaga 22072

>dbj|AK109548.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-F07, full
            insert sequence
          Length = 1489

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 75   gtttggaagagaaaagaaacaaat 98
            ||||||||||||||| ||||||||
Sbjct: 1310 gtttggaagagaaaaaaaacaaat 1287

>dbj|AK071962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078C12, full
            insert sequence
          Length = 1371

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 75   gtttggaagagaaaagaaacaaat 98
            ||||||||||||||| ||||||||
Sbjct: 1301 gtttggaagagaaaaaaaacaaat 1278

>gb|AC113329.7| Mus musculus chromosome 16, clone RP23-460L9, complete sequence
          Length = 176766

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gaagagaaaagaaacaaatg 99
             ||||||||||||||||||||
Sbjct: 32671 gaagagaaaagaaacaaatg 32690

>emb|CT573438.2| Pan troglodytes chromosome X clone RP43-057M01 map Xq28, complete
             sequence
          Length = 162109

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ggaagagaaaagaaacaaat 98
             ||||||||||||||||||||
Sbjct: 98240 ggaagagaaaagaaacaaat 98221

>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence
          Length = 190423

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    ccatggtttggaagagaaaa 89
             ||||||||||||||||||||
Sbjct: 40039 ccatggtttggaagagaaaa 40058

>dbj|AP003501.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-664I21, complete
             sequence
          Length = 186971

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ggaagagaaaagaaacaaat 98
             ||||||||||||||||||||
Sbjct: 50184 ggaagagaaaagaaacaaat 50165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,153,981
Number of Sequences: 3902068
Number of extensions: 3153981
Number of successful extensions: 77132
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77039
Number of HSP's gapped (non-prelim): 93
length of query: 269
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 247
effective length of database: 17,147,199,772
effective search space: 4235358343684
effective search space used: 4235358343684
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)