ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl53d02 |
|---|---|
| Clone Library Name | barley_pub |
>YAVK_CAEEL (Q17851) Hypothetical protein C09B9.3 in chromosome IV| Length = 884 Score = 31.2 bits (69), Expect = 0.63 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 40 TIYGTNHIPYCVEMGR-FVFPVLMGWVDITKIITNHL 147 TI +N+I Y + +G F F LMGWV +++ + N L Sbjct: 695 TIDSSNYITYYIPLGNIFQFICLMGWVKVSEALLNPL 731
>PPNK1_BACLD (Q65LA2) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 267 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + I PS + + EM I R +T+ SP I Sbjct: 149 RGDGLCLSTPSGSTAYNKALGGAIIHPSIRAI--QLAEMASINNRVFRTVGSPLI 201
>PPNK1_LISMO (Q8Y8D7) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 264 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK+ + + PS + + EM I R +TI SP + Sbjct: 148 RGDGLCMSTPSGTTAYNKSLGGALMHPSIEAM--QLTEMASINNRVYRTIGSPLV 200
>PPNK1_LISMF (Q721J8) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 264 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK+ + + PS + + EM I R +TI SP + Sbjct: 148 RGDGLCMSTPSGTTAYNKSLGGALMHPSIEAM--QLTEMASINNRVYRTIGSPLV 200
>PPNK1_LISIN (Q92D53) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 264 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK+ + + PS + + EM I R +TI SP + Sbjct: 148 RGDGLCMSTPSGTTAYNKSLGGALMHPSIEAM--QLTEMASINNRVYRTIGSPLV 200
>PPNK1_BACHD (Q9K904) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + + PS ++ + EM I R +TI SP + Sbjct: 148 RGDGLCISTPSGSTAYNKALGGAILHPSLASI--QISEMASINNRVYRTIGSPLV 200
>PPNK_BACSK (Q5WF06) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 267 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + + PS ++ + EM I R +T+ SP + Sbjct: 149 RGDGLCMSTPSGSTAYNKALGGAILHPSLASI--QLSEMASINNRIYRTLGSPLV 201
>PPNK1_BACSU (O31612) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 266 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSP 233 R LC S P G YNK + I PS + + EM I R +T+ SP Sbjct: 148 RGDGLCLSTPSGSTAYNKALGGAIIHPSIRAI--QLAEMASINNRVFRTVGSP 198
>YDHV_ECOLI (P76192) Hypothetical protein ydhV| Length = 700 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -2 Query: 238 ILGLGIVCKKRCRITSISSFFFGNVIYD 155 + G G C R ITS+S+F GN++ D Sbjct: 65 LTGSGAPCSSRVNITSLSTFTKGNLVVD 92
>PPNK1_BACHK (Q6HLY2) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + I PS + + EM I R +T+ SP + Sbjct: 148 RGDGLCISTPSGSTAYNKALGGAIIHPSIEAI--QIAEMASINNRVFRTVGSPLV 200
>PPNK1_BACCZ (Q63EG5) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + I PS + + EM I R +T+ SP + Sbjct: 148 RGDGLCISTPSGSTAYNKALGGAIIHPSIEAI--QIAEMASINNRVFRTVGSPLV 200
>PPNK1_BACCR (Q81GJ9) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + I PS + + EM I R +T+ SP + Sbjct: 148 RGDGLCISTPSGSTAYNKALGGAIIHPSIEAI--QIAEMASINNRVFRTVGSPLV 200
>PPNK1_BACC1 (Q73BU7) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + I PS + + EM I R +T+ SP + Sbjct: 148 RGDGLCISTPSGSTAYNKALGGAIIHPSIEAI--QIAEMASINNRVFRTVGSPLV 200
>PPNK1_BACAN (Q81TQ3) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + I PS + + EM I R +T+ SP + Sbjct: 148 RGDGLCISTPSGSTAYNKALGGAIIHPSIEAI--QIAEMASINNRVFRTVGSPLV 200
>PPNK_BACST (P58055) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 271 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + + PS + + EM I R +TI SP + Sbjct: 155 RGDGLCISTPTGSTAYNKALGGAILHPSLEAI--QVTEMASINNRVFRTIGSPLV 207
>PPNK1_GEOKA (Q5L1R5) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 271 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI 239 R LC S P G YNK + + PS + + EM I R +TI SP + Sbjct: 155 RGDGLCISTPTGSTAYNKALGGAILHPSLEAI--QVTEMASINNRVFRTIGSPLV 207
>Y1859_ARCFU (O28420) Hypothetical protein AF1859| Length = 289 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -2 Query: 313 GFSTLALLELMYENYVEESTAVIYGI--LG-LGIVCKKRCRITSISSFFFGNVIYDG 152 G L L ++ +YV+ +IYG+ LG +G+ + I SIS G +YDG Sbjct: 93 GRGELTLYINVFGDYVKYLPHIIYGLRYLGKMGLNATSKYEIVSISDAISGKEVYDG 149
>PPNK_LACPL (Q88V61) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 267 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +3 Query: 75 RNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPKI--PYM 248 R LC S P G YNK+ + I P L + E+ I R +T+ SP I PY Sbjct: 148 RGDGLCVSTPTGSTAYNKSVGGAVIHPRLDAL--QMAEIASINNRVFRTLGSPVIVAPYE 205 Query: 249 T 251 T Sbjct: 206 T 206
>CSD_HAEIN (Q57476) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 437 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = -2 Query: 274 NYVEESTAVIYGILGLGIVCKKRCRITSISSFFFGNVIYDGCIDDXXXXXLYPPN-P*GQ 98 +++ S IYG GLG++ K ++ + FFG + D +D P G Sbjct: 250 DFLAFSAHKIYGPNGLGVLTGKLTALSQLQPLFFGGKMVDRVSNDRITFAELPYRLEAGT 309 Query: 97 EKQSGPFLHSMVYGWFHRL*FVRIQLY 17 +G + V W + F + Y Sbjct: 310 PNIAGVIGFNAVLDWLQKWDFTAAEQY 336
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +3 Query: 129 NNHKSSIQPSYMTLPKKKDEME-----VILQRFLQTIPSPKIPYMTAVDSST*FSYISSR 293 ++ K+++ P + K++ E++ VIL++ +T+ KIP M D S + Sbjct: 1083 SSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETLSMEKIPPMVTTDQKQEESKLEKD 1142 Query: 294 RAS 302 +AS Sbjct: 1143 KAS 1145
>L2GL_DROME (P08111) Lethal(2) giant larvae protein| Length = 1161 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +2 Query: 188 NGSYSTTFLTNDSQPQNSIYDSCGLFHIIFIHQLEKGKRR 307 +GSY+T + N P N Y G I++L KGKRR Sbjct: 249 DGSYATWSIDNPEPPSNVNYVPYGPDPCKSINRLYKGKRR 288
>E41LA_HUMAN (Q9HCS5) Band 4.1-like protein 4A (NBL4 protein)| Length = 598 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +3 Query: 111 LGGYNKNNHKSSIQPSYMTLPKKKDEMEVILQRFLQTI 224 LG Y+ H + Y +P +K+E+E ++R +T+ Sbjct: 147 LGDYDPYKHTAGYVSEYRFVPDQKEELEEAIERIHKTL 184
>SIM2_HUMAN (Q14190) Single-minded homolog 2| Length = 667 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 254 CGLFHIIFIHQLEKGKRRKTARHFNLLGSNRCSYNWVE 367 C +FH+ + H L K + T +++ LL S R + WV+ Sbjct: 272 CDVFHLRYAHHLLLVKGQVTTKYYRLL-SKRGGWVWVQ 308
>PNPO_HUMAN (Q9NVS9) Pyridoxine-5'-phosphate oxidase (EC 1.4.3.5)| (Pyridoxamine-phosphate oxidase) Length = 261 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 132 NHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPK 236 +H+SS+ P L KK +E+E + Q Q +P PK Sbjct: 172 SHQSSVIPDREYLRKKNEELEQLYQD--QEVPKPK 204
>RPOC1_WHEAT (Q9XPS8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 683 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +2 Query: 245 YDSCGLFHIIFIHQLEKGKRRKTAR 319 Y+S G +H I+ H L G R+K R Sbjct: 627 YESLGTYHEIYAHYLIMGNRKKEIR 651
>BCDO1_RAT (Q91XT5) Beta,beta-carotene 15,15'-monooxygenase (EC 1.14.99.36)| (Beta-carotene dioxygenase 1) Length = 566 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 150 QPSYMTLPKKKDEME-VILQRFLQTIPSPKIPYMTAVDSST*FSYISSRRASVE 308 +P ++ P KDE + VIL + T P K+P++ +D+ S+ RASV+ Sbjct: 457 EPLFVPTPGAKDEDDGVILSAIISTDPQ-KLPFLLILDAK---SFTELARASVD 506
>FKH2_SCHPO (O60129) Fork head protein homolog 2| Length = 642 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = +3 Query: 6 VQNIYSWIRTNYNLWNQPYTILCRNGPLCFSCPHGLGGYNKNNHKSSIQPSYMTLPKKKD 185 + NIYSWI T+Y PY ++ G N H S+ ++ +P+K Sbjct: 246 LSNIYSWISTHY-----PYYRTTKS-----------GWQNSIRHNLSLNKAFRKVPRKSG 289 Query: 186 E 188 E Sbjct: 290 E 290
>YHDY_BACSU (O07594) Hypothetical mscS family protein yhdY| Length = 371 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = -2 Query: 292 LELMYENYVEESTAVI---YGILGLGIVCKKRCRITSISSFFFGNV 164 L + Y +++E VI Y L + ++C C +T+ SSF F V Sbjct: 76 LAIRYSPFLDEQMPVISKIYRSLIVALLCWGLCNLTATSSFIFHKV 121
>PNPO_BOVIN (Q5E9K3) Pyridoxine-5'-phosphate oxidase (EC 1.4.3.5)| (Pyridoxamine-phosphate oxidase) Length = 261 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +3 Query: 132 NHKSSIQPSYMTLPKKKDEMEVILQRFLQTIPSPK 236 +H+SS+ P L KK E+E + Q Q +P PK Sbjct: 172 SHQSSVIPDREYLRKKNKELEQLYQE--QEVPKPK 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,154,090 Number of Sequences: 219361 Number of extensions: 1204788 Number of successful extensions: 3217 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3217 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
