ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY557340.2| Triticum aestivum root hair defective 3 GTP-bindi... 244 2e-61
2gb|AC107390.4| Homo sapiens BAC clone RP11-534O19 from 4, comple... 44 0.33
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
4dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
5dbj|AK101859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.33
6dbj|AK101558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.33
7dbj|AK070726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.33
8gb|AC185139.2| Pan troglodytes BAC clone CH251-174C16 from chrom... 42 1.3
9gb|AY359583.1| Zea mays B73 Etr2-like ethylene receptor (ETR61) ... 42 1.3
10emb|CR774185.17| Zebrafish DNA sequence from clone CH211-237H18 ... 42 1.3
11emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in... 42 1.3
12gb|AC104651.2| Homo sapiens BAC clone RP11-217P16 from 2, comple... 42 1.3
13gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 40 5.1
14gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome 40 5.1
15gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 5.1
16gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 5.1
17gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit... 40 5.1
18gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion... 40 5.1
19gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, c... 40 5.1
20gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion... 40 5.1
21gb|AF522077.2| Lactobacillus plantarum strain NC8 bacteriocin pr... 40 5.1
22gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's H... 40 5.1
23gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete... 40 5.1
24gb|CP000001.1| Bacillus cereus E33L, complete genome 40 5.1
25emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on ... 40 5.1
26emb|AL353715.21| Human DNA sequence from clone CTD-3184A7 on chr... 40 5.1
27emb|X94434.1|LPATOVGNS L.plantarum pln[A,B,C,D,E,F,G,H,I,J,K,L,M... 40 5.1
28emb|AL935253.1| Lactobacillus plantarum strain WCFS1 complete ge... 40 5.1
29emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on ch... 40 5.1
30gb|AC105213.5| Homo sapiens chromosome 8, clone RP11-346A14, com... 40 5.1
31gb|AC144506.1| Homo sapiens chromosome 17, clone XXfos-800635C12... 40 5.1
32gb|AC139077.2| Homo sapiens chromosome 17, clone XXfos-88899C12,... 40 5.1
33gb|AC007952.15| Homo sapiens chromosome 17, clone RP11-160E2, co... 40 5.1
34gb|AC140106.1| Homo sapiens chromosome 17, clone XXfos-801239H9,... 40 5.1
35gb|AF217796.1|AF217796 Homo sapiens SCG10 like-protein, helicase... 40 5.1
36emb|CR388178.5| Zebrafish DNA sequence from clone DKEY-114D20 in... 40 5.1
37emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-3... 40 5.1
38emb|AL049874.3|CNS0000Q Human chromosome 14 DNA sequence BAC R-1... 40 5.1
39gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.1
40gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 5.1
41gb|AC005389.1|AC005389 Homo sapiens chromosome 17, clone hRPK.60... 40 5.1
42gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosom... 40 5.1
43emb|AL954385.6| Mouse DNA sequence from clone RP23-67H11 on chro... 40 5.1
44emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in... 40 5.1
45emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chro... 40 5.1
46emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on ch... 40 5.1 
>gb|AY557340.2| Triticum aestivum root hair defective 3 GTP-binding protein (wrsi2)
            mRNA, complete cds
          Length = 2800

 Score =  244 bits (123), Expect = 2e-61
 Identities = 179/196 (91%), Gaps = 5/196 (2%)
 Strand = Plus / Minus

                                                                        
Query: 192  gaagttattctacaacgtttcttacaaacgattcccagccccaaaattccatatatgaca 251
            ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 2733 gaagttattctacaatgtttcttacaaacgattcccagccccaaaattccttatataaca 2674

                                                                        
Query: 252  gctgtggactcttccacataattttcatacatcagctcgagaagggca----agcgtaga 307
            |||||||||||||||||| |||| ||||||||||| | | ||||||||    |||||| |
Sbjct: 2673 gctgtggactcttccacaaaattctcatacatcaggttgggaagggcaagcgagcgtaca 2614

                                                                        
Query: 308  aaaaccgcaaggcacttcaatctcctaggctcaaaccgttgcagctacaactgggtagag 367
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||
Sbjct: 2613 aaaaccgcaaggcacttcaatctcctaggctcaaaccgttgcagctacagct-agtagag 2555

                            
Query: 368  ttttcagctaaaagct 383
             |||||||||||||||
Sbjct: 2554 ctttcagctaaaagct 2539



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 134  tcacaaatcatctatacaaccatcatat 161
            ||||||||| ||||||||||||||||||
Sbjct: 2789 tcacaaatcttctatacaaccatcatat 2762
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>gb|AC107390.4| Homo sapiens BAC clone RP11-534O19 from 4, complete sequence
          Length = 114698

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 124   acaaaaataatcacaaatcatc 145
             ||||||||||||||||||||||
Sbjct: 69243 acaaaaataatcacaaatcatc 69264
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 137      caaatcatctatacaaccatcatata 162
                |||||| |||||||||||||||||||
Sbjct: 22124640 caaatcttctatacaaccatcatata 22124615



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 197      tattctacaacgtttcttacaaac 220
                ||||||||| ||||||||||||||
Sbjct: 22124583 tattctacagcgtttcttacaaac 22124560
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>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1112D09
          Length = 125920

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 137   caaatcatctatacaaccatcatata 162
             |||||| |||||||||||||||||||
Sbjct: 20126 caaatcttctatacaaccatcatata 20101



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 197   tattctacaacgtttcttacaaac 220
             ||||||||| ||||||||||||||
Sbjct: 20069 tattctacagcgtttcttacaaac 20046
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>dbj|AK101859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069P18, full
            insert sequence
          Length = 2988

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 137  caaatcatctatacaaccatcatata 162
            |||||| |||||||||||||||||||
Sbjct: 2803 caaatcttctatacaaccatcatata 2778



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 197  tattctacaacgtttcttacaaac 220
            ||||||||| ||||||||||||||
Sbjct: 2746 tattctacagcgtttcttacaaac 2723
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>dbj|AK101558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050C19, full
            insert sequence
          Length = 2213

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 137  caaatcatctatacaaccatcatata 162
            |||||| |||||||||||||||||||
Sbjct: 2106 caaatcttctatacaaccatcatata 2081



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 197  tattctacaacgtttcttacaaac 220
            ||||||||| ||||||||||||||
Sbjct: 2049 tattctacagcgtttcttacaaac 2026
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>dbj|AK070726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059E17, full
            insert sequence
          Length = 2994

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 137  caaatcatctatacaaccatcatata 162
            |||||| |||||||||||||||||||
Sbjct: 2845 caaatcttctatacaaccatcatata 2820



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 197  tattctacaacgtttcttacaaac 220
            ||||||||| ||||||||||||||
Sbjct: 2789 tattctacagcgtttcttacaaac 2766
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>gb|AC185139.2| Pan troglodytes BAC clone CH251-174C16 from chromosome 2, complete
              sequence
          Length = 166804

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 321    acttcaatctcctaggctcaa 341
              |||||||||||||||||||||
Sbjct: 120745 acttcaatctcctaggctcaa 120725
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>gb|AY359583.1| Zea mays B73 Etr2-like ethylene receptor (ETR61) pseudogene, partial
            sequence
          Length = 9532

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 200  tctacaacgtttcttacaaac 220
            |||||||||||||||||||||
Sbjct: 2855 tctacaacgtttcttacaaac 2835
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>emb|CR774185.17| Zebrafish DNA sequence from clone CH211-237H18 in linkage group 13,
             complete sequence
          Length = 154017

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    gctttgtttttcctgtcctca 106
             |||||||||||||||||||||
Sbjct: 97900 gctttgtttttcctgtcctca 97880
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>emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in linkage group 3,
             complete sequence
          Length = 102377

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   cacataattttcatacatcag 286
             |||||||||||||||||||||
Sbjct: 47036 cacataattttcatacatcag 47056
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>gb|AC104651.2| Homo sapiens BAC clone RP11-217P16 from 2, complete sequence
          Length = 106954

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 321   acttcaatctcctaggctcaa 341
             |||||||||||||||||||||
Sbjct: 45203 acttcaatctcctaggctcaa 45183
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     cgtttcttacaaacgattcc 226
               ||||||||||||||||||||
Sbjct: 1412044 cgtttcttacaaacgattcc 1412025
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>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    actcttccacataattttca 278
              ||||||||||||||||||||
Sbjct: 549956 actcttccacataattttca 549975
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    ctacaacgtttcttacaaac 220
              ||||||||||||||||||||
Sbjct: 800240 ctacaacgtttcttacaaac 800221
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    ctacaacgtttcttacaaac 220
              ||||||||||||||||||||
Sbjct: 800135 ctacaacgtttcttacaaac 800116
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>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    actcttccacataattttca 278
              ||||||||||||||||||||
Sbjct: 669745 actcttccacataattttca 669764
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>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    actcttccacataattttca 278
              ||||||||||||||||||||
Sbjct: 377774 actcttccacataattttca 377755
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>gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, complete sequence
          Length = 178625

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    tcaatctcctaggctcaaac 343
              ||||||||||||||||||||
Sbjct: 122595 tcaatctcctaggctcaaac 122576
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>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    actcttccacataattttca 278
              ||||||||||||||||||||
Sbjct: 432965 actcttccacataattttca 432984
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>gb|AF522077.2| Lactobacillus plantarum strain NC8 bacteriocin production locus,
            partial sequence
          Length = 12350

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 323  ttcaatctcctaggctcaaa 342
            ||||||||||||||||||||
Sbjct: 6694 ttcaatctcctaggctcaaa 6675
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>gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216935

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aaaaataatcacaaatcatctata 149
             ||||||||||||||||||| ||||
Sbjct: 53707 aaaaataatcacaaatcatttata 53684
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>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence
          Length = 131611

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   cttcaatctcctaggctcaa 341
             ||||||||||||||||||||
Sbjct: 85016 cttcaatctcctaggctcaa 84997
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    ctacaacgtttcttacaaac 220
              ||||||||||||||||||||
Sbjct: 783150 ctacaacgtttcttacaaac 783131
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>emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on chromosome Xq25 Contains the
             3' end of the HS6ST2 gene for heparan sulfate
             6-O-sulfotransferase 2, a novel gene and the 3' end of a
             novel gene, complete sequence
          Length = 184975

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tcaatctcctaggctcaaac 343
             ||||||||||||||||||||
Sbjct: 17972 tcaatctcctaggctcaaac 17953
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>emb|AL353715.21| Human DNA sequence from clone CTD-3184A7 on chromosome 20 Contains the
             5' end of the GMEB2 gene for glucocorticoid modulatory
             element binding protein 2, the gene for SCG10-like protein
             (SCLIP) (ortholog of rabbit neuroplasticin-2 (NPC2)), the
             TNFRSF6B gene for member 6 (decoy) of tumor necrosis
             factor receptor superfamily, a novel gene and four CpG
             islands, complete sequence
          Length = 92458

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tcaatctcctaggctcaaac 343
             ||||||||||||||||||||
Sbjct: 17086 tcaatctcctaggctcaaac 17067
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>emb|X94434.1|LPATOVGNS L.plantarum pln[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,R,S,T,U,V] genes and
            ORF1
          Length = 16139

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 323  ttcaatctcctaggctcaaa 342
            ||||||||||||||||||||
Sbjct: 2070 ttcaatctcctaggctcaaa 2051
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>emb|AL935253.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 2/11
          Length = 324050

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   ttcaatctcctaggctcaaa 342
             ||||||||||||||||||||
Sbjct: 24642 ttcaatctcctaggctcaaa 24623
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>emb|AL646055.10| Mouse DNA sequence from clone RP23-382C18 on chromosome 11 Contains a
             aldo-keto reductase family 1 member B3 (aldose reductase)
             (Akr1b3) pseudogene, the gene for a novel protein similar
             to human methionine adenosyltransferase II beta (MAT2B),
             the Hmmr gene for hyaluronan mediated motility receptor
             (RHAMM), the gene for a novel protein (D11Ertd603e), the
             Ccng1 gene for cyclin G1 and three CpG islands, complete
             sequence
          Length = 193551

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   cacataattttcatacatca 285
             ||||||||||||||||||||
Sbjct: 54518 cacataattttcatacatca 54537
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>gb|AC105213.5| Homo sapiens chromosome 8, clone RP11-346A14, complete sequence
          Length = 200131

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tatacaaccatcatatatga 165
             ||||||||||||||||||||
Sbjct: 49145 tatacaaccatcatatatga 49126
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>gb|AC144506.1| Homo sapiens chromosome 17, clone XXfos-800635C12, complete sequence
          Length = 36963

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tcaatctcctaggctcaaac 343
             ||||||||||||||||||||
Sbjct: 12647 tcaatctcctaggctcaaac 12666
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>gb|AC139077.2| Homo sapiens chromosome 17, clone XXfos-88899C12, complete sequence
          Length = 37411

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tcaatctcctaggctcaaac 343
             ||||||||||||||||||||
Sbjct: 11043 tcaatctcctaggctcaaac 11062
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>gb|AC007952.15| Homo sapiens chromosome 17, clone RP11-160E2, complete sequence
          Length = 158103

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tcaatctcctaggctcaaac 343
             ||||||||||||||||||||
Sbjct: 86781 tcaatctcctaggctcaaac 86762
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>gb|AC140106.1| Homo sapiens chromosome 17, clone XXfos-801239H9, complete sequence
          Length = 40948

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tcaatctcctaggctcaaac 343
             ||||||||||||||||||||
Sbjct: 13690 tcaatctcctaggctcaaac 13671
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>gb|AF217796.1|AF217796 Homo sapiens SCG10 like-protein, helicase-like protein NHL, M68, and
             ADP-ribosylation factor related protein 1 (ARFRP1) genes,
             complete cds
          Length = 114793

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tcaatctcctaggctcaaac 343
             ||||||||||||||||||||
Sbjct: 10277 tcaatctcctaggctcaaac 10258
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>emb|CR388178.5| Zebrafish DNA sequence from clone DKEY-114D20 in linkage group 22,
              complete sequence
          Length = 171742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    acaaatcatctatacaacca 155
              ||||||||||||||||||||
Sbjct: 110604 acaaatcatctatacaacca 110585
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>emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-307P22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 191464

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    tcaatctcctaggctcaaac 343
              ||||||||||||||||||||
Sbjct: 187703 tcaatctcctaggctcaaac 187722
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>emb|AL049874.3|CNS0000Q Human chromosome 14 DNA sequence BAC R-1042B17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    tcaatctcctaggctcaaac 343
              ||||||||||||||||||||
Sbjct: 164768 tcaatctcctaggctcaaac 164749
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      tgtagaaatgggccgctttg 91
               ||||||||||||||||||||
Sbjct: 4744008 tgtagaaatgggccgctttg 4743989
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    ctacaacgtttcttacaaac 220
              ||||||||||||||||||||
Sbjct: 800239 ctacaacgtttcttacaaac 800220
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>gb|AC005389.1|AC005389 Homo sapiens chromosome 17, clone hRPK.601_N_13, complete sequence
          Length = 120359

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    tcaatctcctaggctcaaac 343
              ||||||||||||||||||||
Sbjct: 107461 tcaatctcctaggctcaaac 107442
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>gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosome unknown, complete
              sequence
          Length = 229445

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    aacaaaaataatcacaaatc 142
              ||||||||||||||||||||
Sbjct: 103180 aacaaaaataatcacaaatc 103161
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>emb|AL954385.6| Mouse DNA sequence from clone RP23-67H11 on chromosome X, complete
            sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 126  aaaaataatcacaaatcatctata 149
            ||||||||||||||| ||||||||
Sbjct: 3764 aaaaataatcacaaaacatctata 3741
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>emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in linkage group 22,
             complete sequence
          Length = 190967

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   acaaatcatctatacaacca 155
             ||||||||||||||||||||
Sbjct: 23324 acaaatcatctatacaacca 23305
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>emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chromosome X, complete
              sequence
          Length = 221912

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    ataacaaaaataatcacaaa 140
              ||||||||||||||||||||
Sbjct: 181005 ataacaaaaataatcacaaa 181024
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>emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on chromosome X, complete
            sequence
          Length = 195054

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 126  aaaaataatcacaaatcatctata 149
            ||||||||||||||| ||||||||
Sbjct: 1770 aaaaataatcacaaaacatctata 1747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,849,225
Number of Sequences: 3902068
Number of extensions: 3849225
Number of successful extensions: 77599
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77337
Number of HSP's gapped (non-prelim): 260
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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