Clone Information

BLAST Search Result

Clone Name	rbastl53c09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ITPR1_BOVIN (Q9TU34) Inositol 1,4,5-trisphosphate receptor type ...	33	0.22
2	ITPR2_RAT (P29995) Inositol 1,4,5-trisphosphate receptor type 2 ...	33	0.22
3	ITPR2_MOUSE (Q9Z329) Inositol 1,4,5-trisphosphate receptor type ...	33	0.22
4	ITPR2_HUMAN (Q14571) Inositol 1,4,5-trisphosphate receptor type ...	33	0.22
5	ITPR2_BOVIN (Q8WN96) Inositol 1,4,5-trisphosphate receptor type ...	33	0.22
6	CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor	32	0.37
7	ITPR1_RAT (P29994) Inositol 1,4,5-trisphosphate receptor type 1 ...	32	0.48
8	ITPR1_MOUSE (P11881) Inositol 1,4,5-trisphosphate receptor type ...	32	0.48
9	ITPR1_HUMAN (Q14643) Inositol 1,4,5-trisphosphate receptor type ...	32	0.48
10	NAL10_HUMAN (Q86W26) NACHT-, LRR- and PYD-containing protein 10 ...	31	0.63
11	WFS1_MOUSE (P56695) Wolframin	31	0.63
12	SCN2A_RAT (P04775) Sodium channel protein type 2 alpha subunit (...	31	0.63
13	CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor	31	0.63
14	CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor	31	0.63
15	PERC_DROME (Q9VEG6) Chorion peroxidase precursor (EC 1.11.1.7) (...	30	1.1
16	RAD50_HALVO (P62133) DNA double-strand break repair rad50 ATPase	30	1.1
17	CHEB1_METAC (Q8TLG9) Chemotaxis response regulator protein-gluta...	30	1.1
18	CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor	29	2.4
19	CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor	29	2.4
20	GBRG2_RAT (P18508) Gamma-aminobutyric-acid receptor gamma-2 subu...	29	3.1
21	GBRG2_HUMAN (P18507) Gamma-aminobutyric-acid receptor gamma-2 su...	29	3.1
22	CND3_XENLA (Q9YHB5) Condensin complex subunit 3 (Chromosome-asso...	28	4.1
23	RPOA_CHLTE (Q8KAJ8) DNA-directed RNA polymerase alpha chain (EC ...	28	4.1
24	ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associate...	28	5.4
25	ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associate...	28	5.4
26	ASPM_GORGO (P62289) Abnormal spindle-like microcephaly-associate...	28	5.4
27	Y077_METJA (Q60384) Hypothetical protein MJ0077	28	5.4
28	ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associate...	28	5.4
29	ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associate...	28	5.4
30	ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associate...	28	5.4
31	ASPM_COLGU (P62287) Abnormal spindle-like microcephaly-associate...	28	5.4
32	ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associate...	28	5.4
33	ASPM_PONPY (P62294) Abnormal spindle-like microcephaly-associate...	28	5.4
34	GYRA_AQUAE (O67108) DNA gyrase subunit A (EC 5.99.1.3)	28	5.4
35	CUL5_CAEEL (Q23639) Cullin-5	28	5.4
36	CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodp...	28	5.4
37	ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associate...	28	5.4
38	GLI3_PANTR (Q5IS56) Zinc finger protein GLI3	28	5.4
39	GLI3_HUMAN (P10071) Zinc finger protein GLI3	28	5.4
40	AK1H_ECOLI (P00561) Bifunctional aspartokinase/homoserine dehydr...	28	7.0
41	WRKY9_ARATH (Q9C9F0) Probable WRKY transcription factor 9 (WRKY ...	28	7.0
42	SYA_METTH (O27718) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	28	7.0
43	MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)	28	7.0
44	YEMA_DROME (P25992) Yemanuclein-alpha	27	9.1
45	JD2AA_XENLA (Q6IRB8) JmjC domain-containing histone demethylatio...	27	9.1
46	ROM2_YEAST (P51862) RHO1 GDP-GTP exchange protein 2	27	9.1
47	LOLA5_DROME (Q9V5M6) Longitudinals lacking protein, isoforms J/P...	27	9.1
48	YS89_CAEEL (Q09624) Hypothetical protein ZK945.9	27	9.1
49	KINH_GIBMO (Q86Z98) Kinesin heavy chain	27	9.1
50	CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor	27	9.1
51	CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel ...	27	9.1
52	HYR1_CANAL (P46591) Hyphally-regulated protein precursor	27	9.1
53	C8AP2_MOUSE (Q9WUF3) CASP8-associated protein 2 (FLICE-associate...	27	9.1

>ITPR1_BOVIN (Q9TU34) Inositol 1,4,5-trisphosphate receptor type 1 (Type 1|
            inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3
            receptor) (IP3 receptor isoform 1) (InsP3R1)
          Length = 2709

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRMRTLI 148
            + R  SL S++ E    ++R L +KLES   LVT +  L+
Sbjct: 2636 RMRAMSLVSSDSEGEQNELRNLQEKLESTMKLVTNLSGLL 2675

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>ITPR2_RAT (P29995) Inositol 1,4,5-trisphosphate receptor type 2 (Type 2|
            inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3
            receptor) (IP3 receptor isoform 2) (InsP3R2)
          Length = 2701

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRM 160
            + R  SL S E +S   +IR L +KLES  SLV ++
Sbjct: 2628 RMRAMSLVSNEGDSEQNEIRNLQEKLESTMSLVKQL 2663

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>ITPR2_MOUSE (Q9Z329) Inositol 1,4,5-trisphosphate receptor type 2 (Type 2|
            inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3
            receptor) (IP3 receptor isoform 2) (InsP3R2) (Inositol
            1,4,5-trisphosphate type V receptor)
          Length = 2701

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRM 160
            + R  SL S E +S   +IR L +KLES  SLV ++
Sbjct: 2628 RMRAMSLVSNEGDSEQNEIRNLQEKLESTMSLVKQL 2663

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>ITPR2_HUMAN (Q14571) Inositol 1,4,5-trisphosphate receptor type 2 (Type 2|
            inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3
            receptor) (IP3 receptor isoform 2) (InsP3R2)
          Length = 2701

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRM 160
            + R  SL S E +S   +IR L +KLES  SLV ++
Sbjct: 2628 RMRAMSLVSNEGDSEQNEIRSLQEKLESTMSLVKQL 2663

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>ITPR2_BOVIN (Q8WN96) Inositol 1,4,5-trisphosphate receptor type 2 (Type 2|
            inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3
            receptor) (IP3 receptor isoform 2) (InsP3R2)
          Length = 2701

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRM 160
            + R  SL S+E +S   ++R L +KLES  SLV ++
Sbjct: 2628 RMRAMSLVSSEGDSEQNEVRNLQEKLESTMSLVKQL 2663

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>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 11/71 (15%)
 Frame = -2

Query: 328 GVERGPGSNNRFATERHLGIQGQMRVPNQHGRREPRG-----------GHQAADRQAGEH 182
           GV+  PG   +       G  G   +P Q G +  RG           GH+     +G  
Sbjct: 595 GVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPP 654

Query: 181 AVPGDENENSD 149
            +PGD+ E  D
Sbjct: 655 GIPGDDGERGD 665

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>ITPR1_RAT (P29994) Inositol 1,4,5-trisphosphate receptor type 1 (Type 1|
            inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3
            receptor) (IP3 receptor isoform 1) (InsP3R1) (IP-3-R)
          Length = 2750

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRM 160
            + R  SL S++ E    ++R L +KLES   LVT +
Sbjct: 2677 RMRAMSLVSSDSEGEQNELRNLQEKLESTMKLVTNL 2712

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>ITPR1_MOUSE (P11881) Inositol 1,4,5-trisphosphate receptor type 1 (Type 1|
            inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3
            receptor) (IP3 receptor isoform 1) (InsP3R1) (Inositol
            1,4,5-trisphosphate-binding protein P400) (Purkinje cell
            protein 1) (Pro
          Length = 2749

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRM 160
            + R  SL S++ E    ++R L +KLES   LVT +
Sbjct: 2676 RMRAMSLVSSDSEGEQNELRNLQEKLESTMKLVTNL 2711

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>ITPR1_HUMAN (Q14643) Inositol 1,4,5-trisphosphate receptor type 1 (Type 1|
            inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3
            receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R)
          Length = 2758

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 267  KARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRM 160
            + R  SL S++ E    ++R L +KLES   LVT +
Sbjct: 2685 RMRAMSLVSSDSEGEQNELRNLQEKLESTMKLVTNL 2720

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>NAL10_HUMAN (Q86W26) NACHT-, LRR- and PYD-containing protein 10|
           (Nucleotide-binding oligomerization domain protein 8)
          Length = 655

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -2

Query: 361 QDNNVSYKHDYGVERGPGSNNRFATERHL--GIQGQMRVPNQHGRREPRGGHQAADRQAG 188
           Q NNVS+K  +  E+   S N F+ +  L  G + + + P+ HG++E +       ++A 
Sbjct: 580 QMNNVSFKIKHSNEKKSQSQNLFSVKSSLSHGPKEEQKCPSVHGQKEGKDNIAGTQKEAS 639

Query: 187 EHAVPGDE 164
                G E
Sbjct: 640 TGKGRGTE 647

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>WFS1_MOUSE (P56695) Wolframin|
          Length = 890

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -2

Query: 319 RGPGSNNRFATERHLGIQGQMRVPNQHGRREPRGGHQAADRQAGEHAVPGDENENSDL-S 143
           R P + +R  T+R   ++  + +P +    + + G   A  + G+H +    + + +L S
Sbjct: 65  RAPQTGSREETDRAGPMKADVEIPFEEVLEKAKAGDPKAQTEVGKHYLRLANDADEELNS 124

Query: 142 CKCVALFLWSVQAGRWYKTKL 80
           C  VA  + + + GR    KL
Sbjct: 125 CSAVAWLILAAKQGRREAVKL 145

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>SCN2A_RAT (P04775) Sodium channel protein type 2 alpha subunit (Sodium|
           channel protein type II alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.2) (Sodium channel
           protein, brain II alpha subunit)
          Length = 2005

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
 Frame = -2

Query: 310 GSNNRFATERHLGIQGQ------MRVPNQHGRREPRGGHQAADRQAGEHAVPGDENENSD 149
           GS N FA + H   +        + VP++HG R P    QA+    G   +P +   +S 
Sbjct: 588 GSENDFADDEHSTFEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSA 647

Query: 148 LSCKCV 131
           + C  V
Sbjct: 648 VDCNGV 653

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>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 11/71 (15%)
 Frame = -2

Query: 328 GVERGPGSNNRFATERHLGIQGQMRVPNQHGRREPRG-----------GHQAADRQAGEH 182
           GV+  PG   +       G  G   +P Q G +  RG           GH+     +G  
Sbjct: 597 GVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPP 656

Query: 181 AVPGDENENSD 149
            +PGD+ E  D
Sbjct: 657 GLPGDDGERGD 667

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>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 11/71 (15%)
 Frame = -2

Query: 328 GVERGPGSNNRFATERHLGIQGQMRVPNQHGRREPRG-----------GHQAADRQAGEH 182
           GV+  PG   +       G  G   +P Q G +  RG           GH+     +G  
Sbjct: 597 GVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPP 656

Query: 181 AVPGDENENSD 149
            +PGD+ E  D
Sbjct: 657 GLPGDDGERGD 667

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>PERC_DROME (Q9VEG6) Chorion peroxidase precursor (EC 1.11.1.7)|
           (Peroxinectin-related protein) (Dpxt) [Contains: Chorion
           peroxidase light chain; Chorion peroxidase heavy chain]
          Length = 831

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = -2

Query: 343 YKHDYGVERGPGSNNRFATER----HLGIQGQMRVPNQHGR 233
           Y HDY V   P   N F+       H  + G+ ++  +HGR
Sbjct: 565 YSHDYNVNVNPAITNEFSGAAYRMGHSSVDGKFQIRQEHGR 605

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>RAD50_HALVO (P62133) DNA double-strand break repair rad50 ATPase|
          Length = 893

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -3

Query: 324 SKEALEATIALLQSDISESKARCASLTSTEDESRAEDIRQLTDKLES 184
           ++EAL A  + L+ D+SE++ R  +      E++AE +R+  D LES
Sbjct: 315 AREALSARESELRDDLSEARTRAQAF-----ETQAERLRERADDLES 356

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>CHEB1_METAC (Q8TLG9) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 349

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/68 (38%), Positives = 36/68 (52%)
 Frame = -3

Query: 351 MFHTNTTTGSKEALEATIALLQSDISESKARCASLTSTEDESRAEDIRQLTDKLESMQSL 172
           MF T TT GSKEALEA + L   D +      A   S  D ++AE  ++L DK+ ++ S 
Sbjct: 78  MFSTLTTEGSKEALEA-LHLGAIDFT------AKSESHHDVNKAE--KELVDKIRNIHSS 128

Query: 171 VTRMRTLI 148
              +  LI
Sbjct: 129 NPNLLRLI 136

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>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor|
          Length = 1496

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 274 GIQGQMRVPNQHGRREPRG--GHQAADRQAGEHAVPGD 167
           GIQG +  P + G+R PRG  G        GE   PG+
Sbjct: 486 GIQGPIGPPGEEGKRGPRGDPGTLGPPGPVGERGAPGN 523

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>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 11/71 (15%)
 Frame = -2

Query: 328 GVERGPGSNNRFATERHLGIQGQMRVPNQHGRREPRG-----------GHQAADRQAGEH 182
           GV+  PG   +       G  G   +P Q G +  RG           GH+     +G  
Sbjct: 595 GVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPP 654

Query: 181 AVPGDENENSD 149
             PGD+ E  D
Sbjct: 655 GPPGDDGERGD 665

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>GBRG2_RAT (P18508) Gamma-aminobutyric-acid receptor gamma-2 subunit precursor|
           (GABA(A) receptor)
          Length = 466

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 24  VHKRKNNFAKKKVRH*PLPSFVLYHRPACTLQRNRATHLQLKSE 155
           V  RK +  K K +  P P+  +  R A T+Q N ATHLQ + E
Sbjct: 359 VSNRKPSKDKDKKKKNPAPTIDIRPRSA-TIQMNNATHLQERDE 401

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>GBRG2_HUMAN (P18507) Gamma-aminobutyric-acid receptor gamma-2 subunit precursor|
           (GABA(A) receptor)
          Length = 467

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 24  VHKRKNNFAKKKVRH*PLPSFVLYHRPACTLQRNRATHLQLKSE 155
           V  RK +  K K +  P P+  +  R A T+Q N ATHLQ + E
Sbjct: 360 VSNRKPSKDKDKKKKNPAPTIDIRPRSA-TIQMNNATHLQERDE 402

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>CND3_XENLA (Q9YHB5) Condensin complex subunit 3 (Chromosome-associated protein|
           G) (Chromosome assembly protein xCAP-G) (Condensin
           subunit CAP-G)
          Length = 1034

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/69 (24%), Positives = 37/69 (53%)
 Frame = -3

Query: 381 VSTPRTPRTTMFHTNTTTGSKEALEATIALLQSDISESKARCASLTSTEDESRAEDIRQL 202
           +S  R P  T+ +      S++ L+  +A ++  + E+K       + ED SRA ++++ 
Sbjct: 467 ISELREPIVTVDNPKDAAQSRK-LQLKLADVKVQLIEAKQALEDSLTNEDYSRASELKEK 525

Query: 201 TDKLESMQS 175
             +LES+++
Sbjct: 526 VKELESLKT 534

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>RPOA_CHLTE (Q8KAJ8) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 328

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -3

Query: 300 IALLQSDISESKARCASLTSTEDESRAEDIRQLTDKLESMQSLV 169
           I+L    I++     A+ + TE+E   E+ +QL D+ ESM+ L+
Sbjct: 213 ISLAGKIINDHITFFANFSPTEEEFSEEEYKQLDDEFESMRKLL 256

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>ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3479

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 906  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 949

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>ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3476

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 906  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 949

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>ASPM_GORGO (P62289) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3476

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 905  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 948

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>Y077_METJA (Q60384) Hypothetical protein MJ0077|
          Length = 382

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 258 CASLTSTEDESRAEDIRQLTDKLESMQSLVT 166
           C  L   +++ R EDI +L D+LES    +T
Sbjct: 80  CEKLKELKEKGREEDISELLDELESYMENIT 110

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>ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 906  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 949

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>ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 906  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 949

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>ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associated protein|
            (Abnormal spindle protein homolog) (Asp homolog)
          Length = 3477

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 906  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 949

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>ASPM_COLGU (P62287) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 906  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 949

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>ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3469

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 897  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 940

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>ASPM_PONPY (P62294) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3471

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 900  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 943

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>GYRA_AQUAE (O67108) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 744

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
 Frame = -3

Query: 324 SKEALEATIALLQS-DISESKA------RCASLTSTEDESRAEDIRQLTDKLESMQSLVT 166
           SK+A EA   L++   +SE +A      R   LTS E E   E+ ++L +K+E  + LV 
Sbjct: 398 SKDASEARNYLMEEFGLSEKQAQAVLDLRLQRLTSLEREKLLEEEKELREKIEYYKKLVA 457

Query: 165 ----RMRTLI*AVNVLLYFFGVYR--LGGGTKQ 85
               R++  I     L+  +G  R    GG K+
Sbjct: 458 SEGERIKVFIEETEELVKKYGDKRRTFIGGVKE 490

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>CUL5_CAEEL (Q23639) Cullin-5|
          Length = 741

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
 Frame = -3

Query: 339 NTTTGSKEALEATIALLQSDISESKARCASLTSTEDESRAEDIRQLTDKLES-----MQS 175
           N+ T  K   +A IAL++S      A C+ L +++D  R + + +L  +  S     ++ 
Sbjct: 237 NSPTSGKHMEKAVIALVESFEDTILAECSKLIASKDVERLQRLYRLIRRTRSGIDTVLKC 296

Query: 174 LVTRMRT 154
           + T +RT
Sbjct: 297 IDTHIRT 303

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>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
 Frame = -2

Query: 373  P*DPQDNNVSYKHDYGVERGPGSNNRFATERHLGIQGQMRVPNQHGRREPRG--GHQAAD 200
            P  P  + +  K D G    PG      T   +G  G++  P   G   PRG  G Q   
Sbjct: 1256 PGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGFP 1315

Query: 199  RQAGEHAVPG 170
               GE   PG
Sbjct: 1316 GVKGEKGNPG 1325

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>ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3473

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 67   ISHSPVLFCTTAQPVHSKEI---EQHIYSSNQSSHSRHQGLHAL 189
            I H P LFC  A+   SKEI       + S +   SRH GL  L
Sbjct: 902  IDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGL 945

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>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3|
          Length = 1580

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 345 HTNTTTGSKEALEATIAL-LQSDISESKARCASLTSTEDES 226
           H++TTT  K+   + +    ++D+SE KA  +S TS EDES
Sbjct: 6   HSSTTTEKKKVENSIVKCSTRTDVSE-KAVASSTTSNEDES 45

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>GLI3_HUMAN (P10071) Zinc finger protein GLI3|
          Length = 1580

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 345 HTNTTTGSKEALEATIAL-LQSDISESKARCASLTSTEDES 226
           H++TTT  K+   + +    ++D+SE KA  +S TS EDES
Sbjct: 6   HSSTTTEKKKVENSIVKCSTRTDVSE-KAVASSTTSNEDES 45

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>AK1H_ECOLI (P00561) Bifunctional aspartokinase/homoserine dehydrogenase I|
           (AKI-HDI) [Includes: Aspartokinase I (EC 2.7.2.4);
           Homoserine dehydrogenase I (EC 1.1.1.3)]
          Length = 820

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 178 LHALQLVGQLPDVLRAALVFR 240
           LH + L+GQ PD + AAL+ R
Sbjct: 105 LHGISLLGQCPDSINAALICR 125

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>WRKY9_ARATH (Q9C9F0) Probable WRKY transcription factor 9 (WRKY DNA-binding|
           protein 9)
          Length = 374

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -3

Query: 273 ESKARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRMRTLI 148
           E  +    L + E+E+  E++ QL  ++ES++   TR+R L+
Sbjct: 74  EDDSSSLGLRTREEENEREELLQLQIQMESVKEENTRLRKLV 115

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>SYA_METTH (O27718) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 898

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -3

Query: 291 LQSDISESKARCASLTSTEDESRAEDIRQLTDKLESMQSLVTRMRTL 151
           L++++S  K + ASL   E + RAE I  LT  ++++ + +  M+ +
Sbjct: 769 LRNEVSRLKEKVASLKILEMKDRAERINDLTVIIDTVDADMDEMKNM 815

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>MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)|
          Length = 1947

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -3

Query: 324  SKEALEATIALLQSDISESKARCASLTSTEDESR--AEDIRQLTDKLESMQ 178
            +K  L+  IALL SDI+E+      L+++ED  R  A D  +L + L   Q
Sbjct: 1742 AKSQLDNEIALLNSDIAEAH---TELSASEDRGRRAASDAAKLAEDLRHEQ 1789

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>YEMA_DROME (P25992) Yemanuclein-alpha|
          Length = 1002

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 214 HQAADRQAGEHAVPGDEN 161
           H  ADRQAG+H   G EN
Sbjct: 411 HGRADRQAGQHGKDGQEN 428

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>JD2AA_XENLA (Q6IRB8) JmjC domain-containing histone demethylation protein 2A-A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A-A)
          Length = 1331

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 30  KRKNNFAKKKVRH*PLPSFVLYHRPACTLQ 119
           + K+N     + H PLPSF  + +P   LQ
Sbjct: 847 ENKDNLFASNLEHKPLPSFASFGKPVSALQ 876

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>ROM2_YEAST (P51862) RHO1 GDP-GTP exchange protein 2|
          Length = 1356

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 358 DNNVSYKHDYGVERGPGSNNRFATERHLGIQGQMRVPNQ 242
           D N  Y   +GVER P S   F ++ H  I  Q+ +PN+
Sbjct: 11  DRNDIYSQIFGVERRPDSFATFDSDSHGDISSQL-LPNR 48

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>LOLA5_DROME (Q9V5M6) Longitudinals lacking protein, isoforms J/P/Q/S/Z|
          Length = 963

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = -3

Query: 378 STPRTPRTTMFHTNTTTGSKEALEATIALLQSDISESKARCASLTSTEDESRAEDIRQLT 199
           STP  P+ +   T+T+T +  A  ATIA  Q+    + A  +S  +  + S  + + Q  
Sbjct: 510 STPIRPKVSTTTTSTSTAAAAAAAATIAAKQA----AAAIASSNINNNNSSLTQTVTQTV 565

Query: 198 DKLESM 181
            ++ S+
Sbjct: 566 TRIGSI 571

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>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/71 (28%), Positives = 27/71 (38%)
 Frame = -3

Query: 378 STPRTPRTTMFHTNTTTGSKEALEATIALLQSDISESKARCASLTSTEDESRAEDIRQLT 199
           +TP T   T   T+TTT        T A+  S  + S +     TST   S A      T
Sbjct: 279 TTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSST 338

Query: 198 DKLESMQSLVT 166
              +   S +T
Sbjct: 339 STTQQSSSTIT 349

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>KINH_GIBMO (Q86Z98) Kinesin heavy chain|
          Length = 931

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
 Frame = -3

Query: 369 RTPRTTMFHTNTTTGS---KEALEATIALLQS-------------DISESKARCASLTST 238
           R    +M+ T+++      ++ LEA +  +Q+             DI E KAR  +  + 
Sbjct: 621 RQAELSMYSTSSSESDSRRRQELEARLEAVQAEYEEILTRNLGPEDIEEVKARLENAFAN 680

Query: 237 EDESRAEDIRQLTDKLESMQSLVTRMRTLI 148
              ++++ + +L + +    +  TRM+TLI
Sbjct: 681 RQTAQSQFVEELKEDIAQKAAENTRMKTLI 710

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>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 8/65 (12%)
 Frame = -2

Query: 328  GVERGPGSNNRFATERHLGIQGQMRVPNQHGRREP--------RGGHQAADRQAGEHAVP 173
            G+  GPGSN         G  G    P   G   P        R GH   D   G   +P
Sbjct: 874  GLPGGPGSNGEPGPSGLAGSSGPRGPPGSVGSPGPVGHSGEAGRDGHPGNDGPPGRDGLP 933

Query: 172  GDENE 158
            G + E
Sbjct: 934  GAKGE 938

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>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 238  GRREPRGGHQAADRQAGEHAVPGDENENSDLSCK 137
            G R P GGH +      E  VPG     S  +C+
Sbjct: 2350 GDRPPTGGHSSGRSPRMERRVPGPARSESPRACR 2383

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>HYR1_CANAL (P46591) Hyphally-regulated protein precursor|
          Length = 937

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -3

Query: 345 HTNTTTGSKEALEATIALLQSDISESKARCASLTSTEDESRAE--DIRQLTDKLESMQSL 172
           +T TT+  + +  ++ A   S +SES +   SLTS+   S++E  D+   T  +ES  + 
Sbjct: 341 NTPTTSSIETSSYSSAATESSVVSESSSAVDSLTSSSLSSKSESSDVVSSTTNIESSSTA 400

Query: 171 V 169
           +
Sbjct: 401 I 401

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>C8AP2_MOUSE (Q9WUF3) CASP8-associated protein 2 (FLICE-associated huge protein)|
          Length = 1962

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 378  STPRTPRTTMFHTNTTTGSKEALEATIAL-LQSDISESKARCASLTS 241
            STP    +  F  +     ++A E  I L L+SD S SK+ C+S TS
Sbjct: 1447 STPEEVISAHFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSWTS 1493


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,827,746
Number of Sequences: 219361
Number of extensions: 1010437
Number of successful extensions: 3408
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3400
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result