Clone Name | rbastl53c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TENS1_BOVIN (Q9GLM4) Tensin-1 | 27 | 9.0 | 2 | Y168_ADE02 (P03292) Hypothetical protein C-168 | 27 | 9.0 | 3 | GLMS_MYCLE (P40831) Glucosamine--fructose-6-phosphate aminotrans... | 27 | 9.0 | 4 | LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late en... | 27 | 9.0 | 5 | LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-bind... | 27 | 9.0 |
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>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 9/37 (24%) Frame = -3 Query: 234 GTPQQCRHPGASMGT---------VATPSAPRTVKHV 151 G+P RHPGA GT VA+P +P +H+ Sbjct: 1247 GSPSLGRHPGAHQGTLASNLHSNAVASPGSPSLGRHL 1283
>Y168_ADE02 (P03292) Hypothetical protein C-168| Length = 168 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +1 Query: 217 ALLRSTHNCVMNSPPAPSISAWMSTLSEG-ARKSMNSAQN 333 AL +NC + +PP +S ST SE +RK+ N +Q+ Sbjct: 103 ALTMHLNNCCVGTPPPRDLSESASTGSENLSRKASNQSQS 142
>GLMS_MYCLE (P40831) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 624 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 6/33 (18%) Frame = +3 Query: 216 GIVEEYPQLRHEL-AAGTEHLG-----VDVHVV 296 GI+E +P LRHEL AG E + V VH+V Sbjct: 107 GIIENFPSLRHELEIAGVEFVSDTDTEVAVHLV 139
>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein| 5) Length = 118 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/57 (35%), Positives = 23/57 (40%) Frame = -2 Query: 394 SAGSSCRPCPTKGGDGRCWRXXXXXXXXXSRPQTTWTSTPRCSVPAASS*RSCGYSS 224 S GSS C + GG G C RPQ S+ CS P+ S CG S Sbjct: 59 SCGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQ----SSDCCSQPSGGS-SCCGGGS 110
>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3| precursor (LTBP-3) Length = 1302 Score = 27.3 bits (59), Expect = 9.0 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -2 Query: 388 GSSCRPCPTKGGDGRC 341 G+ CRPCP +G C Sbjct: 1170 GAQCRPCPPRGAGSHC 1185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,737,332 Number of Sequences: 219361 Number of extensions: 1078805 Number of successful extensions: 2778 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2693 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2778 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)