>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score =  161 bits (81), Expect = 2e-36
 Identities = 114/125 (91%)
 Strand = Plus / Minus

                                                                         
Query: 233   cccacaactgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgt 292
             |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 37638 cccacagctgcgtcatgaactcgccgccggcgccgagcacctcggcgtggatgtccacgt 37579

                                                                         
Query: 293   tgtctgagggcgcgaggaagagtatgaactcggcccagaactccgccagcaccttccatc 352
             |||| || ||||||||||| || |||||||| ||||||||||| |||||||||| ||| |
Sbjct: 37578 tgtccgacggcgcgaggaacaggatgaactccgcccagaactcggccagcacctgccacc 37519

                  
Query: 353   gccgc 357
             |||||
Sbjct: 37518 gccgc 37514

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  161 bits (81), Expect = 2e-36
 Identities = 114/125 (91%)
 Strand = Plus / Minus

                                                                            
Query: 233      cccacaactgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgt 292
                |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 24968785 cccacagctgcgtcatgaactcgccgccggcgccgagcacctcggcgtggatgtccacgt 24968726

                                                                            
Query: 293      tgtctgagggcgcgaggaagagtatgaactcggcccagaactccgccagcaccttccatc 352
                |||| || ||||||||||| || |||||||| ||||||||||| |||||||||| ||| |
Sbjct: 24968725 tgtccgacggcgcgaggaacaggatgaactccgcccagaactcggccagcacctgccacc 24968666

                     
Query: 353      gccgc 357
                |||||
Sbjct: 24968665 gccgc 24968661

>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full
            insert sequence
          Length = 3740

 Score =  161 bits (81), Expect = 2e-36
 Identities = 114/125 (91%)
 Strand = Plus / Minus

                                                                        
Query: 233  cccacaactgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgt 292
            |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 3544 cccacagctgcgtcatgaactcgccgccggcgccgagcacctcggcgtggatgtccacgt 3485

                                                                        
Query: 293  tgtctgagggcgcgaggaagagtatgaactcggcccagaactccgccagcaccttccatc 352
            |||| || ||||||||||| || |||||||| ||||||||||| |||||||||| ||| |
Sbjct: 3484 tgtccgacggcgcgaggaacaggatgaactccgcccagaactcggccagcacctgccacc 3425

                 
Query: 353  gccgc 357
            |||||
Sbjct: 3424 gccgc 3420

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                           
Query: 241     tgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgttgtctgag 300
               |||||||||||||||||||| || |||||||||||| ||||||||||||||||||| || 
Sbjct: 3478280 tgcgtcatgaactcgccgcctgcgccgagcatctcgacgtggatgtccacgttgtccgat 3478339

                                                          
Query: 301     ggcgcgaggaagagtatgaactcggcccagaactccgccagca 343
               ||||||||||| |||||||||||  |||||||||| |||||||
Sbjct: 3478340 ggcgcgaggaacagtatgaactcaacccagaactcggccagca 3478382

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                           
Query: 241     tgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgttgtctgag 300
               |||||||||||||||||||| || |||||||||||| ||||||||||||||||||| || 
Sbjct: 3478225 tgcgtcatgaactcgccgcctgcgccgagcatctcgacgtggatgtccacgttgtccgat 3478284

                                                          
Query: 301     ggcgcgaggaagagtatgaactcggcccagaactccgccagca 343
               ||||||||||| |||||||||||  |||||||||| |||||||
Sbjct: 3478285 ggcgcgaggaacagtatgaactcaacccagaactcggccagca 3478327

>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 116371

 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                         
Query: 241   tgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgttgtctgag 300
             |||||||||||||||||||| || |||||||||||| ||||||||||||||||||| || 
Sbjct: 53635 tgcgtcatgaactcgccgcctgcgccgagcatctcgacgtggatgtccacgttgtccgat 53576

                                                        
Query: 301   ggcgcgaggaagagtatgaactcggcccagaactccgccagca 343
             ||||||||||| |||||||||||  |||||||||| |||||||
Sbjct: 53575 ggcgcgaggaacagtatgaactcaacccagaactcggccagca 53533

>ref|XM_477941.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2139

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  tgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgttgtctgag 300
            |||||||||||||||||||||    ||||  |||||||||||  |||  |||| || || 
Sbjct: 2054 tgcgtcatgaactcgccgccgcgggcgaggctctcggcgtgggcgtcggcgttctccgac 1995

                                                                    
Query: 301  ggcgcgaggaagagtatgaactcggcccagaactccgccagcaccttccatcgccg 356
            ||||| |||||||| |  | ||||||||||| |||||| |||| |||||| |||||
Sbjct: 1994 ggcgccaggaagagcaccagctcggcccagacctccgcgagcagcttccaccgccg 1939

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 241      tgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgttgtctgag 300
                |||||||||||||||||||||    ||||  |||||||||||  |||  |||| || || 
Sbjct: 15800863 tgcgtcatgaactcgccgccgcgggcgaggctctcggcgtgggcgtcggcgttctccgac 15800804

                                                                        
Query: 301      ggcgcgaggaagagtatgaactcggcccagaactccgccagcaccttccatcgccg 356
                ||||| |||||||| |  | ||||||||||| |||||| |||| |||||| |||||
Sbjct: 15800803 ggcgccaggaagagcaccagctcggcccagacctccgcgagcagcttccaccgccg 15800748

>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0027N13
          Length = 179669

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                         
Query: 241   tgcgtcatgaactcgccgccggcaccgagcatctcggcgtggatgtccacgttgtctgag 300
             |||||||||||||||||||||    ||||  |||||||||||  |||  |||| || || 
Sbjct: 40377 tgcgtcatgaactcgccgccgcgggcgaggctctcggcgtgggcgtcggcgttctccgac 40318

                                                                     
Query: 301   ggcgcgaggaagagtatgaactcggcccagaactccgccagcaccttccatcgccg 356
             ||||| |||||||| |  | ||||||||||| |||||| |||| |||||| |||||
Sbjct: 40317 ggcgccaggaagagcaccagctcggcccagacctccgcgagcagcttccaccgccg 40262

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 260     cggcaccgagcatctcggcgt 280
               |||||||||||||||||||||
Sbjct: 2749145 cggcaccgagcatctcggcgt 2749125

>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete
             sequence
          Length = 227048

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    agatactagaagataagttta 106
             |||||||||||||||||||||
Sbjct: 87463 agatactagaagataagttta 87443

>gb|AC122327.5| Mus musculus BAC clone RP23-339D20 from chromosome 12, complete sequence
          Length = 217167

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     agatactagaagataagttta 106
              |||||||||||||||||||||
Sbjct: 168591 agatactagaagataagttta 168571

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 206     ccaggatgccggcattgttga 226
               |||||||||||||||||||||
Sbjct: 1778137 ccaggatgccggcattgttga 1778157

>ref|XM_367889.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG07793.4) partial mRNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 caggatgccggcattgttgaggag 230
           |||||||||||| |||||||||||
Sbjct: 408 caggatgccggcgttgttgaggag 385

>gb|AY658928.1| Synthetic construct Peudomonas aeruginosa clone FLH047044.01F
           PA3427 gene, partial cds
          Length = 912

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 caggatgccggcattgttga 226
           ||||||||||||||||||||
Sbjct: 309 caggatgccggcattgttga 290

>gb|AC147383.4| Pan troglodytes BAC clone RP43-157C2 from 7, complete sequence
          Length = 190266

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     gtatatatatatgcagaaag 34
              ||||||||||||||||||||
Sbjct: 172523 gtatatatatatgcagaaag 172504

>gb|U41265.2|CTU41265 Comamonas testosteroni beta-hydroxysteroid dehydrogenase gene,
            complete cds; and unknown genes
          Length = 3175

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  caggatgccggcattgttga 226
            ||||||||||||||||||||
Sbjct: 2684 caggatgccggcattgttga 2665

>gb|AC002452.1| Homo sapiens BAC clone GS1-310A5 from 7, complete sequence
          Length = 177112

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    gtatatatatatgcagaaag 34
             ||||||||||||||||||||
Sbjct: 22908 gtatatatatatgcagaaag 22889

>emb|X63379.1|PT173BHYD P.testosteroni gene for (17-3)beta hydroxysteroid dehydrogenase
          Length = 2666

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 caggatgccggcattgttga 226
           ||||||||||||||||||||
Sbjct: 801 caggatgccggcattgttga 782

>emb|AL021940.1|HS117P20 Human DNA sequence from clone RP1-117P20 on chromosome 1q24 Contains
             part of a novel gene (FLJ45155 FLJ10706 FLJ39174), the
             SELL gene for selectin L (lymphocyte adhesion molecule 1),
             the SELE gene for selectin E (endothelial adhesion
             molecule 1) and two novel genes (MGC9084), complete
             sequence
          Length = 141589

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aagataagtttaacctaaca 114
             ||||||||||||||||||||
Sbjct: 11224 aagataagtttaacctaaca 11243

>gb|AC159548.5| Mus musculus 6 BAC RP23-77B7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207770

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 151    tacatgtttaacagtcctcggtgc 174
              ||||||||||||| ||||||||||
Sbjct: 103101 tacatgtttaacaatcctcggtgc 103124

>gb|AC158755.6| Mus musculus chromosome 1, clone RP23-461O16, complete sequence
          Length = 224116

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tatatatatatgcagaaagc 35
             ||||||||||||||||||||
Sbjct: 60728 tatatatatatgcagaaagc 60709

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     caggatgccggcattgttga 226
               ||||||||||||||||||||
Sbjct: 1278679 caggatgccggcattgttga 1278698

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     caggatgccggcattgttga 226
               ||||||||||||||||||||
Sbjct: 4114079 caggatgccggcattgttga 4114060

>gb|AC153992.7| Mus musculus 6 BAC RP24-116E17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 195972

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 151    tacatgtttaacagtcctcggtgc 174
              ||||||||||||| ||||||||||
Sbjct: 172567 tacatgtttaacaatcctcggtgc 172590

>gb|AE004764.1| Pseudomonas aeruginosa PAO1, section 325 of 529 of the complete
           genome
          Length = 10425

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 caggatgccggcattgttga 226
           ||||||||||||||||||||
Sbjct: 692 caggatgccggcattgttga 711

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     caggatgccggcattgttga 226
               ||||||||||||||||||||
Sbjct: 2175739 caggatgccggcattgttga 2175720

>emb|BX324157.4| Zebrafish DNA sequence from clone DKEY-15N1 in linkage group 3,
             complete sequence
          Length = 272769

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tatatatatatgcagaaagc 35
             ||||||||||||||||||||
Sbjct: 44209 tatatatatatgcagaaagc 44190

>emb|CR524482.18| Zebrafish DNA sequence from clone DKEY-109F24 in linkage group 15,
             complete sequence
          Length = 125769

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    tatatatatatgcagaaagc 35
             ||||||||||||||||||||
Sbjct: 27365 tatatatatatgcagaaagc 27384

>emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chromosome X, complete
             sequence
          Length = 236946

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tatatatatatgcagaaagc 35
             ||||||||||||||||||||
Sbjct: 35302 tatatatatatgcagaaagc 35283


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,759,293
Number of Sequences: 3902068
Number of extensions: 11759293
Number of successful extensions: 74515
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74044
Number of HSP's gapped (non-prelim): 468
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)