Clone Name | rbastl53c01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 121 bits (61), Expect = 1e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 157 ccggcggggcgaggttgagcaccatgtcgggccccttctccccggcgacggaaaactcgt 216 ||||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||||||| Sbjct: 29000693 ccggcggcgcgaggttgagcaccatgtcggggcccttgtcgccggcgacggagaactcgt 29000752 Query: 217 cgggcaccggcacgcccagttcctc 241 ||||||||||||||||||| ||||| Sbjct: 29000753 cgggcaccggcacgcccagctcctc 29000777
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 121 bits (61), Expect = 1e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 157 ccggcggggcgaggttgagcaccatgtcgggccccttctccccggcgacggaaaactcgt 216 ||||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||||||| Sbjct: 15680 ccggcggcgcgaggttgagcaccatgtcggggcccttgtcgccggcgacggagaactcgt 15739 Query: 217 cgggcaccggcacgcccagttcctc 241 ||||||||||||||||||| ||||| Sbjct: 15740 cgggcaccggcacgcccagctcctc 15764
>dbj|AK065611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029I23, full insert sequence Length = 2957 Score = 121 bits (61), Expect = 1e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 157 ccggcggggcgaggttgagcaccatgtcgggccccttctccccggcgacggaaaactcgt 216 ||||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||||||| Sbjct: 2650 ccggcggcgcgaggttgagcaccatgtcggggcccttgtcgccggcgacggagaactcgt 2591 Query: 217 cgggcaccggcacgcccagttcctc 241 ||||||||||||||||||| ||||| Sbjct: 2590 cgggcaccggcacgcccagctcctc 2566
>emb|BX511157.10| Zebrafish DNA sequence from clone DKEY-197M14 in linkage group 5, complete sequence Length = 159528 Score = 42.1 bits (21), Expect = 0.79 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 tgaagttttacagtgtaaaaa 60 ||||||||||||||||||||| Sbjct: 11082 tgaagttttacagtgtaaaaa 11062
>ref|XM_675903.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7726.2), mRNA Length = 3714 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 tgccgtgcctttcaaattcc 134 |||||||||||||||||||| Sbjct: 2280 tgccgtgcctttcaaattcc 2299
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cgtcgggcaccggcacgccc 233 |||||||||||||||||||| Sbjct: 2756643 cgtcgggcaccggcacgccc 2756662 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,834,881 Number of Sequences: 3902068 Number of extensions: 1834881 Number of successful extensions: 32386 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32302 Number of HSP's gapped (non-prelim): 84 length of query: 243 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 221 effective length of database: 17,147,199,772 effective search space: 3789531149612 effective search space used: 3789531149612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)