ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108324.1| Zea mays PCO097023 mRNA sequence 66 7e-08
2gb|BT017848.1| Zea mays clone EL01N0510F05.c mRNA sequence 58 2e-05
3ref|XM_864589.1| PREDICTED: Bos taurus hypothetical protein LOC6... 46 0.069
4ref|XM_741604.1| Aspergillus fumigatus Af293 hypothetical protei... 44 0.27
5gb|AC159312.2| Mus musculus BAC clone RP23-156N21 from chromosom... 42 1.1
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.1
7ref|XM_993802.1| PREDICTED: Mus musculus hypothetical protein LO... 42 1.1
8ref|XM_980903.1| PREDICTED: Mus musculus hypothetical protein LO... 42 1.1
9emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chr... 42 1.1
10gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, com... 42 1.1
11emb|CR609181.1| full-length cDNA clone CS0DJ014YJ23 of T cells (... 42 1.1
12gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 42 1.1
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
15gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.1
16gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequ... 42 1.1
17dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
18dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
19dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
20dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
21dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
22dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
23dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
24dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
26emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K1... 42 1.1
27gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
28ref|XM_516034.1| PREDICTED: Pan troglodytes similar to frizzled ... 40 4.2
29ref|NM_175719.1| Homo sapiens thyroid peroxidase (TPO), transcri... 40 4.2
30ref|NM_175720.1| Homo sapiens thyroid peroxidase (TPO), transcri... 40 4.2
31ref|NM_175721.1| Homo sapiens thyroid peroxidase (TPO), transcri... 40 4.2
32ref|XM_525669.1| PREDICTED: Pan troglodytes similar to Thyroid p... 40 4.2
33ref|NM_000547.3| Homo sapiens thyroid peroxidase (TPO), transcri... 40 4.2
34gb|AC092241.2| Drosophila melanogaster clone BACR09F02, complete... 40 4.2
35gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete... 40 4.2
36ref|XM_959072.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.2
37ref|XM_330507.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.2
38emb|CR693833.2|CNS0FYB9 Tetraodon nigroviridis full-length cDNA 40 4.2
39emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chro... 40 4.2
40gb|AC090022.12| Homo sapiens 12 BAC RP11-154D9 (Roswell Park Can... 40 4.2
41gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
42emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 4.2
43ref|NM_204952.1| Gallus gallus forkhead box D2 (FOXD2), mRNA 40 4.2
44gb|AC122687.2| Homo sapiens 12 BAC RP13-501J24 (Roswell Park Can... 40 4.2
45gb|AC124943.4| Homo sapiens 12 BAC RP11-20E24 (Roswell Park Canc... 40 4.2
46ref|NM_143742.2| Drosophila melanogaster GCR(ich) CG5812-RA (GCR... 40 4.2
47ref|NM_057215.3| Drosophila melanogaster abrupt CG4807-RB, trans... 40 4.2
48ref|NM_057214.3| Drosophila melanogaster abrupt CG4807-RA, trans... 40 4.2
49gb|AC092588.2| Homo sapiens BAC clone RP11-44A12 from 2, complet... 40 4.2
50gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete seq... 40 4.2
51dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
52gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, r... 40 4.2
53gb|AC008216.3|AC008216 Drosophila melanogaster, chromosome 3R, r... 40 4.2
54gb|DQ011222.1| Homo sapiens thyroid peroxidase (TPO) gene, compl... 40 4.2
55gb|AC105450.1| Homo sapiens BAC clone RP11-112B11 from 2, comple... 40 4.2
56gb|BT004476.1| Drosophila melanogaster LP07342 full insert cDNA 40 4.2
57gb|BT003807.1| Drosophila melanogaster AT11330 full insert cDNA 40 4.2
58gb|AC108489.5| Homo sapiens BAC clone RP13-981I10 from 2, comple... 40 4.2
59dbj|AK119734.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
60dbj|AK073032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
61gb|AC006073.1|AC006073 Drosophila melanogaster, chromosome 2L, r... 40 4.2
62gb|M17755.2|HUMTPOC Homo sapiens thyroid peroxidase (TPO) mRNA, ... 40 4.2
63gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97... 40 4.2
64gb|AE003631.4| Drosophila melanogaster chromosome 2L, section 40... 40 4.2
65gb|BT001583.1| Drosophila melanogaster RE25924 full insert cDNA 40 4.2
66gb|U37272.1|GGU37272 Gallus gallus winged helix protein CWH-1 mR... 40 4.2
67gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
68emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.2
69gb|AC146336.1| Gallus gallus BAC clone CH261-15P9 from chromosom... 40 4.2
70gb|BC095448.1| Homo sapiens thyroid peroxidase, mRNA (cDNA clone... 40 4.2
71dbj|AB208960.1| Homo sapiens mRNA for thyroid peroxidase isoform... 40 4.2
72gb|M25707.1|HUMTPO07 Human thyroid peroxidase (TPO) gene, exon 8 40 4.2
73gb|U43733.1|DMU43733 Drosophila melanogaster abrupt (ab) mRNA, c... 40 4.2
74gb|J02970.1|HUMTPOB Human thyroid peroxidase mRNA, clone phTPO-2.4 40 4.2
75gb|J02969.1|HUMTPOA Human thyroid peroxidase mRNA, clone phTPO-2.8 40 4.2
76emb|AJ271041.1|DME271041 Drosophila melanogaster GCR(ich) gene f... 40 4.2
77emb|Y00406.1|HSTPO Human mRNA for thyroperoxidase 40 4.2
78emb|X17358.1|HSASTPO2 Human mRNA from alternatively spliced TPO-... 40 4.2 
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence
          Length = 1794

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 229  atttagctatataagtcgtcatcttcagctgcagctgcagcggatgcaaaaggatcggca 288
            ||||| || |||||||| ||||| |||||||| |||||||||||||| || |||||||| 
Sbjct: 1537 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcggcc 1478

                 
Query: 289  gcagc 293
            |||||
Sbjct: 1477 gcagc 1473
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>gb|BT017848.1| Zea mays clone EL01N0510F05.c mRNA sequence
          Length = 646

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 229 atttagctatataagtcgtcatcttcagctgcagctgcagcggatgcaaaaggatcg 285
           ||||| || |||||||| ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 481 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcg 425
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>ref|XM_864589.1| PREDICTED: Bos taurus hypothetical protein LOC613623 (LOC613623),
           mRNA
          Length = 1038

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 295 gcggaggcggtgcccgcggccgg 317
           |||||||||||||||||||||||
Sbjct: 391 gcggaggcggtgcccgcggccgg 413
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>ref|XM_741604.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g02350) partial
            mRNA
          Length = 4089

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 254  cagctgcagctgcagcggatgc 275
            ||||||||||||||||||||||
Sbjct: 4001 cagctgcagctgcagcggatgc 4022
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>gb|AC159312.2| Mus musculus BAC clone RP23-156N21 from chromosome 12, complete sequence
          Length = 205080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     agatgaaaagatacagctgca 90
              |||||||||||||||||||||
Sbjct: 108914 agatgaaaagatacagctgca 108894
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 235     ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
               |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2834339 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2834379



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 257     ctgcagctgcagcggatgca 276
               ||||||||||||||||||||
Sbjct: 1861325 ctgcagctgcagcggatgca 1861306
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>ref|XM_993802.1| PREDICTED: Mus musculus hypothetical protein LOC672481 (LOC672481),
           mRNA
          Length = 1059

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 284 cggcagcagcggcggaggcgg 304
           |||||||||||||||||||||
Sbjct: 561 cggcagcagcggcggaggcgg 541
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>ref|XM_980903.1| PREDICTED: Mus musculus hypothetical protein LOC666010 (LOC666010),
           mRNA
          Length = 1071

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 284 cggcagcagcggcggaggcgg 304
           |||||||||||||||||||||
Sbjct: 561 cggcagcagcggcggaggcgg 541
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>emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chromosome 11 Contains an H+
              transporting, mitochondria ATP synthase F0 complex subunit
              g (Atp5l) pseudogene, the Peli1 gene for pellino 1, a novel
              pseudogene, a ribosomal protein large P0 (Rplp0)
              pseudogene, the Vps54 gene for vacuolar protein sorting 54
              (yeast), a acyl-Coenzyme A dehydrogenase family (Acad)
              pseudogene and two CpG islands, complete sequence
          Length = 206768

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 284    cggcagcagcggcggaggcgg 304
              |||||||||||||||||||||
Sbjct: 152454 cggcagcagcggcggaggcgg 152474
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>gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, complete sequence
          Length = 119347

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   cggcagcagcggcggaggcgg 304
             |||||||||||||||||||||
Sbjct: 73466 cggcagcagcggcggaggcgg 73446
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>emb|CR609181.1| full-length cDNA clone CS0DJ014YJ23 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1717

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 284 cggcagcagcggcggaggcgg 304
           |||||||||||||||||||||
Sbjct: 70  cggcagcagcggcggaggcgg 50
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
             sequence
          Length = 135510

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   cggcagcagcggcggaggcgg 304
             |||||||||||||||||||||
Sbjct: 67194 cggcagcagcggcggaggcgg 67174
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 284      cggcagcagcggcggaggcgg 304
                |||||||||||||||||||||
Sbjct: 21267165 cggcagcagcggcggaggcgg 21267185
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 235     ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
               |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2834450 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2834490



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 257     ctgcagctgcagcggatgca 276
               ||||||||||||||||||||
Sbjct: 1861323 ctgcagctgcagcggatgca 1861304
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>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 235    ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
              |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 106295 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 106335
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>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence
          Length = 38975

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   cggcagcagcggcggaggcgg 304
             |||||||||||||||||||||
Sbjct: 16064 cggcagcagcggcggaggcgg 16044
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>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full
            insert sequence
          Length = 2914

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
            |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
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>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full
            insert sequence
          Length = 2680

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
            |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
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>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full
            insert sequence
          Length = 2685

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
            |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
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>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full
            insert sequence
          Length = 2701

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
            |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
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>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full
            insert sequence
          Length = 2685

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
            |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
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>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full
            insert sequence
          Length = 2685

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
            |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
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>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full
           insert sequence
          Length = 800

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 284 cggcagcagcggcggaggcgg 304
           |||||||||||||||||||||
Sbjct: 228 cggcagcagcggcggaggcgg 248
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>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full
            insert sequence
          Length = 1232

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  ctatataagtcgtcatcttcagctgcagctgcagcggatgc 275
            |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 1097 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 1057
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 284      cggcagcagcggcggaggcgg 304
                |||||||||||||||||||||
Sbjct: 21278429 cggcagcagcggcggaggcgg 21278449
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>emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K15, complete sequence
          Length = 184517

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   gtcttgcataccacaaaacat 176
             |||||||||||||||||||||
Sbjct: 78487 gtcttgcataccacaaaacat 78507
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>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
             complete sequence
          Length = 138054

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ctgcagctgcagcggatgca 276
             ||||||||||||||||||||
Sbjct: 86187 ctgcagctgcagcggatgca 86168
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>ref|XM_516034.1| PREDICTED: Pan troglodytes similar to frizzled 2 (LOC459881), mRNA
          Length = 3168

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 291  agcggcggaggcggtgcccgcggc 314
            |||||||||||||||| |||||||
Sbjct: 1258 agcggcggaggcggtgtccgcggc 1235
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>ref|NM_175719.1| Homo sapiens thyroid peroxidase (TPO), transcript variant 2, mRNA
          Length = 2969

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 945 aggcggtgcccgcggccggc 926
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>ref|NM_175720.1| Homo sapiens thyroid peroxidase (TPO), transcript variant 3, mRNA
          Length = 3005

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 940 aggcggtgcccgcggccggc 921
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>ref|NM_175721.1| Homo sapiens thyroid peroxidase (TPO), transcript variant 4, mRNA
          Length = 3003

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 940 aggcggtgcccgcggccggc 921
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>ref|XM_525669.1| PREDICTED: Pan troglodytes similar to Thyroid peroxidase precursor
            (TPO) (LOC470287), mRNA
          Length = 6150

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  aggcggtgcccgcggccggc 318
            ||||||||||||||||||||
Sbjct: 2821 aggcggtgcccgcggccggc 2802
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>ref|NM_000547.3| Homo sapiens thyroid peroxidase (TPO), transcript variant 1, mRNA
          Length = 3135

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 940 aggcggtgcccgcggccggc 921
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>gb|AC092241.2| Drosophila melanogaster clone BACR09F02, complete sequence
          Length = 178190

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    ggcagcagcggcggaggcgg 304
              ||||||||||||||||||||
Sbjct: 156284 ggcagcagcggcggaggcgg 156303
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>gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete sequence
          Length = 193926

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   cagcagcggcggaggcggtg 306
             ||||||||||||||||||||
Sbjct: 34527 cagcagcggcggaggcggtg 34546
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>ref|XM_959072.1| Neurospora crassa OR74A hypothetical protein (NCU03072.1) partial
            mRNA
          Length = 3276

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  tcggcagcagcggcggaggcggtg 306
            |||||||||||||||| |||||||
Sbjct: 3155 tcggcagcagcggcggtggcggtg 3178
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>ref|XM_330507.1| Neurospora crassa OR74A hypothetical protein (NCU03072.1) partial
            mRNA
          Length = 3276

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  tcggcagcagcggcggaggcggtg 306
            |||||||||||||||| |||||||
Sbjct: 3155 tcggcagcagcggcggtggcggtg 3178
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>emb|CR693833.2|CNS0FYB9 Tetraodon nigroviridis full-length cDNA
          Length = 1178

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 284  cggcagcagcggcggaggcggtgc 307
            ||||||||||||||| ||||||||
Sbjct: 1109 cggcagcagcggcggcggcggtgc 1132
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>emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chromosome 6q13-14.3
             Contains part of the BAI3 gene for brain-specific
             angiogenesis inhibitor 3, complete sequence
          Length = 113826

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   aataattttaagtacatagt 147
             ||||||||||||||||||||
Sbjct: 96361 aataattttaagtacatagt 96342
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>gb|AC090022.12| Homo sapiens 12 BAC RP11-154D9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   taataattttaagtacatag 146
             ||||||||||||||||||||
Sbjct: 64745 taataattttaagtacatag 64764
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>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
              complete sequence
          Length = 122218

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    ctgcagctgcagcggatgca 276
              ||||||||||||||||||||
Sbjct: 114086 ctgcagctgcagcggatgca 114105
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    ggaggcggtgcccgcggccg 316
              ||||||||||||||||||||
Sbjct: 126383 ggaggcggtgcccgcggccg 126402
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>ref|NM_204952.1| Gallus gallus forkhead box D2 (FOXD2), mRNA
          Length = 1708

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 ggcagcagcggcggaggcgg 304
           ||||||||||||||||||||
Sbjct: 148 ggcagcagcggcggaggcgg 167
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>gb|AC122687.2| Homo sapiens 12 BAC RP13-501J24 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 141411

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  attttaagtacatagtttga 151
            ||||||||||||||||||||
Sbjct: 1854 attttaagtacatagtttga 1873
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>gb|AC124943.4| Homo sapiens 12 BAC RP11-20E24 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 47466

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 attttaagtacatagtttga 151
           ||||||||||||||||||||
Sbjct: 148 attttaagtacatagtttga 129
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>ref|NM_143742.2| Drosophila melanogaster GCR(ich) CG5812-RA (GCR(ich)), mRNA
          Length = 1618

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 cagcagcggcggaggcggtg 306
           ||||||||||||||||||||
Sbjct: 404 cagcagcggcggaggcggtg 423
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>ref|NM_057215.3| Drosophila melanogaster abrupt CG4807-RB, transcript variant B (ab),
            mRNA
          Length = 5110

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  ggcagcagcggcggaggcgg 304
            ||||||||||||||||||||
Sbjct: 2657 ggcagcagcggcggaggcgg 2676
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>ref|NM_057214.3| Drosophila melanogaster abrupt CG4807-RA, transcript variant A (ab),
            mRNA
          Length = 5140

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  ggcagcagcggcggaggcgg 304
            ||||||||||||||||||||
Sbjct: 2687 ggcagcagcggcggaggcgg 2706
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>gb|AC092588.2| Homo sapiens BAC clone RP11-44A12 from 2, complete sequence
          Length = 140401

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ggcagcagcggcggaggcgg 304
              ||||||||||||||||||||
Sbjct: 131778 ggcagcagcggcggaggcgg 131759
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>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence
          Length = 117931

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   gcggaggcggtgcccgcggc 314
             ||||||||||||||||||||
Sbjct: 15075 gcggaggcggtgcccgcggc 15094
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 284      cggcagcagcggcggaggcggtgc 307
                |||| |||||||||||||||||||
Sbjct: 24840470 cggcggcagcggcggaggcggtgc 24840447
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>gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, region 97D-97E, BAC clone
              BACR05C10, complete sequence
          Length = 174894

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    cagcagcggcggaggcggtg 306
              ||||||||||||||||||||
Sbjct: 143639 cagcagcggcggaggcggtg 143658
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>gb|AC008216.3|AC008216 Drosophila melanogaster, chromosome 3R, region 97E-97E, BAC clone
            BACR27C22, complete sequence
          Length = 179486

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  cagcagcggcggaggcggtg 306
            ||||||||||||||||||||
Sbjct: 9125 cagcagcggcggaggcggtg 9144
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>gb|DQ011222.1| Homo sapiens thyroid peroxidase (TPO) gene, complete cds
          Length = 133236

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   aggcggtgcccgcggccggc 318
             ||||||||||||||||||||
Sbjct: 65638 aggcggtgcccgcggccggc 65619
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>gb|AC105450.1| Homo sapiens BAC clone RP11-112B11 from 2, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   aggcggtgcccgcggccggc 318
             ||||||||||||||||||||
Sbjct: 66133 aggcggtgcccgcggccggc 66152
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>gb|BT004476.1| Drosophila melanogaster LP07342 full insert cDNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 cagcagcggcggaggcggtg 306
           ||||||||||||||||||||
Sbjct: 392 cagcagcggcggaggcggtg 411
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>gb|BT003807.1| Drosophila melanogaster AT11330 full insert cDNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 ggcagcagcggcggaggcgg 304
           ||||||||||||||||||||
Sbjct: 538 ggcagcagcggcggaggcgg 557
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>gb|AC108489.5| Homo sapiens BAC clone RP13-981I10 from 2, complete sequence
          Length = 167463

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    aggcggtgcccgcggccggc 318
              ||||||||||||||||||||
Sbjct: 159153 aggcggtgcccgcggccggc 159134
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>dbj|AK119734.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-A02, full
            insert sequence
          Length = 3924

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  ttcagctgcagctgcagcgg 271
            ||||||||||||||||||||
Sbjct: 2143 ttcagctgcagctgcagcgg 2162
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>dbj|AK073032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146H06, full
           insert sequence
          Length = 1512

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 ctgcagctgcagcggatgca 276
           ||||||||||||||||||||
Sbjct: 860 ctgcagctgcagcggatgca 841
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>gb|AC006073.1|AC006073 Drosophila melanogaster, chromosome 2L, region 32D3-32E2, P1 clones
             DS05055 and DS02287, complete sequence
          Length = 94440

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ggcagcagcggcggaggcgg 304
             ||||||||||||||||||||
Sbjct: 77763 ggcagcagcggcggaggcgg 77782
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>gb|M17755.2|HUMTPOC Homo sapiens thyroid peroxidase (TPO) mRNA, complete cds
          Length = 3060

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 940 aggcggtgcccgcggccggc 921
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>gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97 of 118 of the
             complete sequence
          Length = 222554

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   cagcagcggcggaggcggtg 306
             ||||||||||||||||||||
Sbjct: 33192 cagcagcggcggaggcggtg 33211
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>gb|AE003631.4| Drosophila melanogaster chromosome 2L, section 40 of 83 of the complete
              sequence
          Length = 256684

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    ggcagcagcggcggaggcgg 304
              ||||||||||||||||||||
Sbjct: 201119 ggcagcagcggcggaggcgg 201138
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>gb|BT001583.1| Drosophila melanogaster RE25924 full insert cDNA
          Length = 4854

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  ggcagcagcggcggaggcgg 304
            ||||||||||||||||||||
Sbjct: 2658 ggcagcagcggcggaggcgg 2677
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>gb|U37272.1|GGU37272 Gallus gallus winged helix protein CWH-1 mRNA, complete cds
          Length = 1708

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 ggcagcagcggcggaggcgg 304
           ||||||||||||||||||||
Sbjct: 148 ggcagcagcggcggaggcgg 167
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 284      cggcagcagcggcggaggcggtgc 307
                |||| |||||||||||||||||||
Sbjct: 24768676 cggcggcagcggcggaggcggtgc 24768653
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>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 284    cggcagcagcggcggaggcggtgc 307
              |||| |||||||||||||||||||
Sbjct: 124398 cggcggcagcggcggaggcggtgc 124421
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>gb|AC146336.1| Gallus gallus BAC clone CH261-15P9 from chromosome unknown, complete
             sequence
          Length = 176371

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    acagatgaaaagatacagct 87
             ||||||||||||||||||||
Sbjct: 38499 acagatgaaaagatacagct 38518
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>gb|BC095448.1| Homo sapiens thyroid peroxidase, mRNA (cDNA clone MGC:111197
           IMAGE:30329791), complete cds
          Length = 3090

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 940 aggcggtgcccgcggccggc 921
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>dbj|AB208960.1| Homo sapiens mRNA for thyroid peroxidase isoform d variant protein
          Length = 5392

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 643 aggcggtgcccgcggccggc 624
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>gb|M25707.1|HUMTPO07 Human thyroid peroxidase (TPO) gene, exon 8
          Length = 1996

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 717 aggcggtgcccgcggccggc 698
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>gb|U43733.1|DMU43733 Drosophila melanogaster abrupt (ab) mRNA, complete cds
          Length = 4498

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  ggcagcagcggcggaggcgg 304
            ||||||||||||||||||||
Sbjct: 2048 ggcagcagcggcggaggcgg 2067
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>gb|J02970.1|HUMTPOB Human thyroid peroxidase mRNA, clone phTPO-2.4
          Length = 2877

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 928 aggcggtgcccgcggccggc 909
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>gb|J02969.1|HUMTPOA Human thyroid peroxidase mRNA, clone phTPO-2.8
          Length = 3048

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 928 aggcggtgcccgcggccggc 909
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>emb|AJ271041.1|DME271041 Drosophila melanogaster GCR(ich) gene for gly-rich protein, exons 1-2
          Length = 2564

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  cagcagcggcggaggcggtg 306
            ||||||||||||||||||||
Sbjct: 1047 cagcagcggcggaggcggtg 1066
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>emb|Y00406.1|HSTPO Human mRNA for thyroperoxidase
          Length = 3027

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 896 aggcggtgcccgcggccggc 877
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>emb|X17358.1|HSASTPO2 Human mRNA from alternatively spliced TPO-2 gene for thyroid
           peroxidase (EC.1.11.1.7)
          Length = 2845

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 aggcggtgcccgcggccggc 318
           ||||||||||||||||||||
Sbjct: 921 aggcggtgcccgcggccggc 902


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,035,723
Number of Sequences: 3902068
Number of extensions: 3035723
Number of successful extensions: 78075
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77751
Number of HSP's gapped (non-prelim): 324
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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