ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARY2_MOUSE (P50295) Arylamine N-acetyltransferase 2 (EC 2.3.1.5)... 30 2.0
2ARY2_MESAU (P50293) Arylamine N-acetyltransferase 2 (EC 2.3.1.5)... 29 3.4
3E434_ADECT (P87568) Early E4 30 kDa protein 28 4.5
4GUX1_HUMGT (P15828) Exoglucanase 1 precursor (EC 3.2.1.91) (Exog... 28 4.5
5ARY1_HUMAN (P18440) Arylamine N-acetyltransferase 1 (EC 2.3.1.5)... 28 4.5
6IGA3_HAEIN (P45385) Immunoglobulin A1 protease precursor (EC 3.4... 28 5.9
7RNH_SALTY (P0A2B9) Ribonuclease HI (EC 3.1.26.4) (RNase HI) (Rib... 28 5.9
8RNH_SALTI (P0A2C0) Ribonuclease HI (EC 3.1.26.4) (RNase HI) 28 5.9
9RNH_SALPA (Q5PFD8) Ribonuclease H (EC 3.1.26.4) (RNase H) 28 5.9
10CAN10_RAT (Q9ES66) Calpain-10 (EC 3.4.22.-) (Calcium-activated n... 28 7.7
11CAN10_MOUSE (Q9ESK3) Calpain-10 (EC 3.4.22.-) (Calcium-activated... 28 7.7
12PSA72_DROME (Q24178) Proteasome subunit alpha type 7-1A (EC 3.4.... 28 7.7
13PYRC_BUCAI (P57416) Dihydroorotase (EC 3.5.2.3) (DHOase) 27 10.0
14ADRL_CAEEL (Q94177) ADIPOR-like receptor C43G2.1 27 10.0
15VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contai... 27 10.0
16TLP1_CASSA (Q9SMH2) Thaumatin-like protein 1 precursor 27 10.0
17MUTL_ECO57 (Q8XDN4) DNA mismatch repair protein mutL 27 10.0

>ARY2_MOUSE (P50295) Arylamine N-acetyltransferase 2 (EC 2.3.1.5) (Arylamide|
           acetylase 2) (N-acetyltransferase type 2) (NAT-2)
          Length = 290

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 126 AQQFCSEHGPFGVHCIVGTT 185
           ++ FCS   P GVHC+VG+T
Sbjct: 219 SKSFCSLQTPEGVHCLVGST 238



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>ARY2_MESAU (P50293) Arylamine N-acetyltransferase 2 (EC 2.3.1.5) (Arylamide|
           acetylase 2) (Arylamine N-acetyltransferase,
           polymorphic) (PNAT) (N-acetyltransferase type 2) (NAT-2)
           (AT-2)
          Length = 290

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 126 AQQFCSEHGPFGVHCIVGTT 185
           ++ FCS   P GVHC+VG T
Sbjct: 219 SKSFCSLQTPEGVHCLVGCT 238



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>E434_ADECT (P87568) Early E4 30 kDa protein|
          Length = 259

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 190 WLVVPTMQCTPNGPCSLQNCWAW 122
           WLV+    C+    CSL+NC  W
Sbjct: 177 WLVLKCKSCSLQNYCSLKNCAVW 199



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>GUX1_HUMGT (P15828) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)|
           (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase)
           (Beta-glucancellobiohydrolase)
          Length = 525

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
 Frame = -2

Query: 256 RSACCATSEDFVGSSRCHKEPSWLVVPTMQCTPNGPC-------SLQNCWAWDINVSFAA 98
           + AC  T+E        H   SW      +CT  G C       +L + W W   VS + 
Sbjct: 19  QQACSLTTER-------HPSLSW-----NKCTAGGQCQTVQASITLDSNWRWTHQVSGST 66

Query: 97  SLYMGRKLET 68
           + Y G K +T
Sbjct: 67  NCYTGNKWDT 76



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>ARY1_HUMAN (P18440) Arylamine N-acetyltransferase 1 (EC 2.3.1.5) (Arylamide|
           acetylase 1) (Arylamine N-acetyltransferase,
           monomorphic) (MNAT) (N-acetyltransferase type 1) (NAT-1)
          Length = 290

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 126 AQQFCSEHGPFGVHCIVGTT 185
           ++ FCS   P GVHC+VG T
Sbjct: 219 SKSFCSLQTPDGVHCLVGFT 238



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>IGA3_HAEIN (P45385) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1|
           protease)
          Length = 1545

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -2

Query: 139 QNCWAWDINVSFAASLYMGRKLETYTRNLSTN 44
           +N  A +INV+  A+LY GR +E+ T N++ +
Sbjct: 743 RNFKATNINVTNNATLYSGRNVESITSNITAS 774



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>RNH_SALTY (P0A2B9) Ribonuclease HI (EC 3.1.26.4) (RNase HI) (Ribonuclease H)|
           (RNase H)
          Length = 155

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 237 HQKTL*AVVVATRNLPGLLFLQCSALQMVRVHCKIAGHGISMLVLQLVCIWGGNWK 70
           H+KT       T N    L     AL+ ++ HC++     S  V Q +  W  NWK
Sbjct: 31  HEKTFSEGYTLTTNNRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWK 86



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>RNH_SALTI (P0A2C0) Ribonuclease HI (EC 3.1.26.4) (RNase HI)|
          Length = 155

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 237 HQKTL*AVVVATRNLPGLLFLQCSALQMVRVHCKIAGHGISMLVLQLVCIWGGNWK 70
           H+KT       T N    L     AL+ ++ HC++     S  V Q +  W  NWK
Sbjct: 31  HEKTFSEGYTLTTNNRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWK 86



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>RNH_SALPA (Q5PFD8) Ribonuclease H (EC 3.1.26.4) (RNase H)|
          Length = 155

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 237 HQKTL*AVVVATRNLPGLLFLQCSALQMVRVHCKIAGHGISMLVLQLVCIWGGNWK 70
           H+KT       T N    L     AL+ ++ HC++     S  V Q +  W  NWK
Sbjct: 31  HEKTFSEGYTLTTNNRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWK 86



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>CAN10_RAT (Q9ES66) Calpain-10 (EC 3.4.22.-) (Calcium-activated neutral|
           proteinase 10) (CANP 10)
          Length = 666

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +3

Query: 147 HGPFGVHCIVGTTSQEGSLWQRLLPTKSSDVAQQADLIYNSPTGIFW 287
           H P+G  C  G   + G  W ++ P K S++  Q         G FW
Sbjct: 262 HNPWGRRCWQGLWREGGEGWNQVEPAKESELLAQLQ------EGEFW 302



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>CAN10_MOUSE (Q9ESK3) Calpain-10 (EC 3.4.22.-) (Calcium-activated neutral|
           proteinase 10) (CANP 10)
          Length = 666

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +3

Query: 147 HGPFGVHCIVGTTSQEGSLWQRLLPTKSSDVAQQADLIYNSPTGIFW 287
           H P+G  C  G   + G  W ++ P K S++  Q         G FW
Sbjct: 262 HNPWGRRCWQGLWREGGEGWNQVEPAKESELLAQLQ------EGEFW 302



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>PSA72_DROME (Q24178) Proteasome subunit alpha type 7-1A (EC 3.4.25.1)|
           (Testis-specific proteasome 28 kDa subunit 1A)
           (Testis-specific alpha4-t1 proteasome subunit)
          Length = 249

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +3

Query: 138 CSEHGPFGVHCIVGTTSQEGSLWQRLLPTKSSDVAQQADLIYNSPTGIF 284
           C+   PFG+ C++G    +GS                A L +  P+GIF
Sbjct: 123 CNGRRPFGISCLIGGIDADGS----------------ARLFHTEPSGIF 155



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>PYRC_BUCAI (P57416) Dihydroorotase (EC 3.5.2.3) (DHOase)|
          Length = 350

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 72  SSFLPIYKLAAKLTLISHAQQFCSEHGP 155
           SS L   K+  ++  + + Q FCSE+GP
Sbjct: 275 SSLLSYVKVFEEMRALKYLQSFCSENGP 302



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>ADRL_CAEEL (Q94177) ADIPOR-like receptor C43G2.1|
          Length = 434

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 177 LQCSALQMVRVHCKIAGHGISMLVLQLVCIW 85
           L C ++ +V++ CK+   GIS+L++     W
Sbjct: 257 LSCHSVNVVKIFCKLDYMGISLLIIGSFIPW 287



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>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von|
            Willebrand antigen II]
          Length = 2813

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
 Frame = -2

Query: 247  CC-----ATSEDFVGSSRCHKEPSWLVVPTMQCTPNGPCSLQNC 131
            CC     +  E   GS R   + SW  V +   +P  PC +  C
Sbjct: 2490 CCGRCLPSACEVVTGSPRGDSQSSWKSVGSQWASPENPCLINEC 2533



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>TLP1_CASSA (Q9SMH2) Thaumatin-like protein 1 precursor|
          Length = 243

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 95  TSCKTNIDIPCPAILQ*TRTIWSALHCRN 181
           TSC+ N++  CPA LQ   +  S L C++
Sbjct: 151 TSCRANVNAVCPAELQVKGSDASVLACKS 179



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>MUTL_ECO57 (Q8XDN4) DNA mismatch repair protein mutL|
          Length = 615

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 296 NVIPENACWAVVN*VCLLCYIRRLCRQ 216
           N++ ENA W++   + LL  + RLC Q
Sbjct: 564 NLMSENAQWSMAQAITLLADVERLCPQ 590


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,110,918
Number of Sequences: 219361
Number of extensions: 940161
Number of successful extensions: 2032
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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