Clone Name | rbastl53b04 |
---|---|
Clone Library Name | barley_pub |
>DRL27_ARATH (Q9T048) Putative disease resistance protein At4g27190| Length = 985 Score = 39.7 bits (91), Expect = 0.003 Identities = 18/59 (30%), Positives = 35/59 (59%) Frame = -2 Query: 412 LRVENCPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWENRDEVAYLDSKYFIPI*QNP 236 + V +C L +P+SST G++K+I + WWE+L+W++ + + +F P+ + P Sbjct: 919 VEVIHCNQLNCLPISST--CGRIKKIKGELSWWERLEWDDPSALTTV-QPFFNPVREVP 974
>DRL31_ARATH (Q9FLB4) Putative disease resistance protein At5g05400| Length = 874 Score = 32.7 bits (73), Expect = 0.34 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = -2 Query: 412 LRVENCPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWEN 293 + +++CP L +PL S + + I + EW + LQWE+ Sbjct: 825 INIKSCPKLTKLPLDSRSAWKQNVVINAEEEWLQGLQWED 864
>ZN479_HUMAN (Q96JC4) Zinc finger protein 479 (Zinc finger protein Kr19) (HKr19)| Length = 524 Score = 32.7 bits (73), Expect = 0.34 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = -2 Query: 373 LSSTHNYGKLKQICSSVEWWEKLQWENRDEVAYLDSKYFIPI*QNPNSNGFCMACRLSSV 194 LS+T N K+ Q V+ + K NRD+ Y +K+F N FCM L+ Sbjct: 149 LSTTQN--KIFQTHKYVKVFGKFSNSNRDKTRYTGNKHFKC---NKYGKSFCMLSHLNQH 203 Query: 193 FILHTNKRS 167 ++HT ++S Sbjct: 204 QVIHTREKS 212
>DRL23_ARATH (O82484) Putative disease resistance protein At4g10780| Length = 892 Score = 31.6 bits (70), Expect = 0.76 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -2 Query: 406 VENCPNLRSIPL-SSTHNYGKLKQI-CSSVEWWEKLQWENRDEVAYLDSKYFIP 251 VE CP LR +PL S T GK + EW E ++W +DE L +F+P Sbjct: 835 VERCPKLRKLPLDSKTGTVGKKFVLQYKETEWIESVEW--KDEATKL---HFLP 883
>LYOX_BOVIN (P33072) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl| oxidase) Length = 418 Score = 30.8 bits (68), Expect = 1.3 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -2 Query: 397 CPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWENRDEV 281 C +R P +++H +Q + W +K+QWEN +V Sbjct: 15 CALVRCAPPAASHRQPPREQAAAPGAWRQKIQWENNGQV 53
>RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance to Pseudomonas| syringae protein 2) Length = 909 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -2 Query: 412 LRVENCPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWEN-RDEVAYLDSKYFIP 251 L + NCP ++ +P L + +WW+ L+ + +E+ YL F+P Sbjct: 856 LVITNCPRVKKLPFQERRTQMNLPTVYCEEKWWKALEKDQPNEELCYLPR--FVP 908
>E1BL_ADE07 (P03245) E1B protein, large T-antigen| Length = 492 Score = 30.4 bits (67), Expect = 1.7 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -2 Query: 319 WWEKLQWENRDEVAYLDSKY 260 WW ++Q E RDEV+ L KY Sbjct: 129 WWHEVQSEGRDEVSILQEKY 148
>DRL19_ARATH (Q9C8T9) Putative disease resistance protein At1g63350| Length = 898 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = -2 Query: 412 LRVENCPNLRSIPL---SSTHNYGKLKQICSSVEWWEKLQWEN 293 + V CPNL+ +PL S H L +EW +++WE+ Sbjct: 821 INVMGCPNLKKLPLDSKSGKHGGNGLIITHREMEWITRVEWED 863
>CY1_RHORU (P23135) Cytochrome c1 precursor| Length = 272 Score = 29.3 bits (64), Expect = 3.7 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 Query: 322 EWWEKLQWENRDEVAYLDSKYF 257 EWW K Q E EVA+ ++KYF Sbjct: 168 EWWVKQQQEKGLEVAFNEAKYF 189
>MOT5_HUMAN (O15374) Monocarboxylate transporter 5 (MCT 5) (MCT 4)| Length = 487 Score = 29.3 bits (64), Expect = 3.7 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = -3 Query: 240 TPIPMAFVWHAG*VLSSFFTQIRDLLLNCLKFVCVTL*LLYVVRTAFLYMVYSAI 76 T I AFV G ++SS+ T I F+CVT+ LL + +AFLY V + + Sbjct: 89 TSILGAFVVTGGYLISSWATSI--------PFLCVTMGLLPGLGSAFLYQVAAVV 135
>RPS5_ARATH (O64973) Disease resistance protein RPS5 (Resistance to Pseudomonas| syringae protein 5) (pNd3/pNd10) Length = 889 Score = 29.3 bits (64), Expect = 3.7 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = -2 Query: 412 LRVENCPNLRSIPLSSTHNYG--KLKQICSSVEWWEKLQWENR 290 + VE C LR +PL S +L EW E+++WE++ Sbjct: 830 IHVEKCEKLRKLPLDSKSGIAGEELVIYYGEREWIERVEWEDQ 872
>DRL24_ARATH (O23317) Probable disease resistance protein At4g14610 (pCol1)| Length = 719 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -2 Query: 403 ENCPNLRSIPLSSTHNYGKLKQICSSVE--WWEKLQWENR 290 E+CP L+ +PL+S ++ + E W E ++WE++ Sbjct: 665 EHCPKLKKLPLNSKSGTAGVELVVKYGENKWLEGVEWEDK 704
>DRL1_ARATH (P60838) Probable disease resistance protein At1g12280| Length = 894 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = -2 Query: 412 LRVENCPNLRSIPLSSTHNYGKLKQIC--SSVEWWEKLQWEN 293 + + CP LR +PL S + + EW E+++W+N Sbjct: 829 IHITKCPELRKLPLDSEIAIRDEELVIKYQEEEWLERVEWDN 870
>DRL20_ARATH (Q9SH22) Putative disease resistance protein At1g63360| Length = 884 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -2 Query: 412 LRVENCPNLRSIPLSSTH-NYGKLKQICSSVE--WWEKLQWENRDEVAYLDSKYFIP 251 + + CPNLR +PL ST G+ I + + W+E ++W DE K F+P Sbjct: 825 INIRECPNLRKLPLDSTSGKQGENGCIIRNKDSRWFEGVKW--ADEAT---KKRFLP 876
>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3| Length = 465 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/43 (25%), Positives = 25/43 (58%) Frame = -2 Query: 142 MCDVVASVRC*NCILVHGILCNLLILHSCNTICLLKSQSIRVC 14 +C +++SV C+ V +C ++ +C +C+++S + VC Sbjct: 365 LCSILSSVCVCVCVCVCMYVCMCVMESACVYVCVMESACVCVC 407
>BIOF_ECOLI (P12998) 8-amino-7-oxononanoate synthase (EC 2.3.1.47) (AONS)| (8-amino-7-ketopelargonate synthase) (7-keto-8-amino-pelargonic acid synthetase) (7-KAP synthetase) (L-alanine--pimelyl CoA ligase) Length = 384 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = -1 Query: 302 VGK*GRGGISGQQVLHSNLTEPQFQWLLYGMQVEF 198 +G G G +SG V+H L E +WL Y + F Sbjct: 71 IGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLF 105
>HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specific| transcription factor HBP1) Length = 349 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/46 (30%), Positives = 18/46 (39%) Frame = +1 Query: 271 PDMPPRPYFPTAVSPTIQLNYISASTSHSYVWSSAGCFSDLGNSPP 408 P MPP +FP V+ A +H Y+W G PP Sbjct: 43 PAMPPHGFFPPPVA---------AGQAHPYMWGPQHMVPPYGTPPP 79
>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor| Length = 1169 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +1 Query: 166 EISYLCEE*RQNSTCMPYKSHWNWGSVRLE*STCCPDMPPRPYF-PTAVSPTIQLNYISA 342 E+ C E ST PY + +W S E T C + Y P S T NY S+ Sbjct: 525 EVCTECTETESTSTSTPYVTSSSWSS--SEVCTECTETESTSYVTPYVSSSTAAANYTSS 582 Query: 343 STSHSYV 363 +S S V Sbjct: 583 FSSSSEV 589 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +1 Query: 166 EISYLCEE*RQNSTCMPYKSHWNWGSVRLE*STCCPDMPPRPYF-PTAVSPTIQLNYISA 342 E+ C E ST PY + +W S E T C + Y P S T NY S+ Sbjct: 399 EVCTECTETESTSTSTPYVTSSSWSS--SEVCTECTETESTSYVTPYVSSSTAAANYTSS 456 Query: 343 STSHSYV 363 +S S V Sbjct: 457 FSSSSEV 463
>DRL15_ARATH (Q940K0) Probable disease resistance protein At1g61180| Length = 889 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 9/60 (15%) Frame = -2 Query: 406 VENCPNLRSIPLSSTHNYGKLKQ----ICSSVEWWEKLQWENRD-EVAYLDS----KYFI 254 V NCP LR +PL++T + K+++ + E +L+WE+ D + +L S KYF+ Sbjct: 822 VSNCPKLRKLPLNAT-SVSKVEEFEIHMYPPPEQENELEWEDDDTKNRFLPSIKPYKYFV 880
>RFL1_ARATH (Q8L3R3) Disease resistance protein RFL1 (RPS5-like protein 1)| (pNd13/pNd14) Length = 885 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = -2 Query: 406 VENCPNLRSIPLSSTHNYGKLKQIC---SSVEWWEKLQWEN 293 + NCP LR +PL S + K+++ +W E+++WE+ Sbjct: 832 LNNCPKLRKLPLDS-KSVVKVEEFVIKYKEKKWIERVEWED 871
>DRL38_ARATH (Q9LVT3) Putative disease resistance protein At5g47260| Length = 885 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Frame = -2 Query: 412 LRVENCPNLRSIPLSSTHNYGKL------KQICSSVEWWEKLQWENRDEVAYLDSKYFIP 251 L + CP LR +P +S G +Q+ VEW ++ + ++ +++Y +P Sbjct: 808 LVIRRCPELRRLPFNSESTIGNQVETIIEEQVIKIVEWEDE---ATKQRFSHFNNRYLLP 864 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,878,981 Number of Sequences: 219361 Number of extensions: 1263443 Number of successful extensions: 3079 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3016 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3074 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)