ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DRL27_ARATH (Q9T048) Putative disease resistance protein At4g27190 40 0.003
2DRL31_ARATH (Q9FLB4) Putative disease resistance protein At5g05400 33 0.34
3ZN479_HUMAN (Q96JC4) Zinc finger protein 479 (Zinc finger protei... 33 0.34
4DRL23_ARATH (O82484) Putative disease resistance protein At4g10780 32 0.76
5LYOX_BOVIN (P33072) Protein-lysine 6-oxidase precursor (EC 1.4.3... 31 1.3
6RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance ... 31 1.3
7E1BL_ADE07 (P03245) E1B protein, large T-antigen 30 1.7
8DRL19_ARATH (Q9C8T9) Putative disease resistance protein At1g63350 30 2.9
9CY1_RHORU (P23135) Cytochrome c1 precursor 29 3.7
10MOT5_HUMAN (O15374) Monocarboxylate transporter 5 (MCT 5) (MCT 4) 29 3.7
11RPS5_ARATH (O64973) Disease resistance protein RPS5 (Resistance ... 29 3.7
12DRL24_ARATH (O23317) Probable disease resistance protein At4g146... 29 4.9
13DRL1_ARATH (P60838) Probable disease resistance protein At1g12280 28 6.4
14DRL20_ARATH (Q9SH22) Putative disease resistance protein At1g63360 28 6.4
15SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3 28 6.4
16BIOF_ECOLI (P12998) 8-amino-7-oxononanoate synthase (EC 2.3.1.47... 28 6.4
17HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specif... 28 8.3
18YK82_YEAST (P36170) Hypothetical protein YKR102W precursor 28 8.3
19DRL15_ARATH (Q940K0) Probable disease resistance protein At1g61180 28 8.3
20RFL1_ARATH (Q8L3R3) Disease resistance protein RFL1 (RPS5-like p... 28 8.3
21DRL38_ARATH (Q9LVT3) Putative disease resistance protein At5g47260 28 8.3

>DRL27_ARATH (Q9T048) Putative disease resistance protein At4g27190|
          Length = 985

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 18/59 (30%), Positives = 35/59 (59%)
 Frame = -2

Query: 412  LRVENCPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWENRDEVAYLDSKYFIPI*QNP 236
            + V +C  L  +P+SST   G++K+I   + WWE+L+W++   +  +   +F P+ + P
Sbjct: 919  VEVIHCNQLNCLPISST--CGRIKKIKGELSWWERLEWDDPSALTTV-QPFFNPVREVP 974



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>DRL31_ARATH (Q9FLB4) Putative disease resistance protein At5g05400|
          Length = 874

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 412 LRVENCPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWEN 293
           + +++CP L  +PL S   + +   I +  EW + LQWE+
Sbjct: 825 INIKSCPKLTKLPLDSRSAWKQNVVINAEEEWLQGLQWED 864



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>ZN479_HUMAN (Q96JC4) Zinc finger protein 479 (Zinc finger protein Kr19) (HKr19)|
          Length = 524

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = -2

Query: 373 LSSTHNYGKLKQICSSVEWWEKLQWENRDEVAYLDSKYFIPI*QNPNSNGFCMACRLSSV 194
           LS+T N  K+ Q    V+ + K    NRD+  Y  +K+F     N     FCM   L+  
Sbjct: 149 LSTTQN--KIFQTHKYVKVFGKFSNSNRDKTRYTGNKHFKC---NKYGKSFCMLSHLNQH 203

Query: 193 FILHTNKRS 167
            ++HT ++S
Sbjct: 204 QVIHTREKS 212



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>DRL23_ARATH (O82484) Putative disease resistance protein At4g10780|
          Length = 892

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 406 VENCPNLRSIPL-SSTHNYGKLKQI-CSSVEWWEKLQWENRDEVAYLDSKYFIP 251
           VE CP LR +PL S T   GK   +     EW E ++W  +DE   L   +F+P
Sbjct: 835 VERCPKLRKLPLDSKTGTVGKKFVLQYKETEWIESVEW--KDEATKL---HFLP 883



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>LYOX_BOVIN (P33072) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl|
           oxidase)
          Length = 418

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 397 CPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWENRDEV 281
           C  +R  P +++H     +Q  +   W +K+QWEN  +V
Sbjct: 15  CALVRCAPPAASHRQPPREQAAAPGAWRQKIQWENNGQV 53



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>RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance to Pseudomonas|
            syringae protein 2)
          Length = 909

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 412  LRVENCPNLRSIPLSSTHNYGKLKQICSSVEWWEKLQWEN-RDEVAYLDSKYFIP 251
            L + NCP ++ +P         L  +    +WW+ L+ +   +E+ YL    F+P
Sbjct: 856  LVITNCPRVKKLPFQERRTQMNLPTVYCEEKWWKALEKDQPNEELCYLPR--FVP 908



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>E1BL_ADE07 (P03245) E1B protein, large T-antigen|
          Length = 492

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 319 WWEKLQWENRDEVAYLDSKY 260
           WW ++Q E RDEV+ L  KY
Sbjct: 129 WWHEVQSEGRDEVSILQEKY 148



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>DRL19_ARATH (Q9C8T9) Putative disease resistance protein At1g63350|
          Length = 898

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 412 LRVENCPNLRSIPL---SSTHNYGKLKQICSSVEWWEKLQWEN 293
           + V  CPNL+ +PL   S  H    L      +EW  +++WE+
Sbjct: 821 INVMGCPNLKKLPLDSKSGKHGGNGLIITHREMEWITRVEWED 863



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>CY1_RHORU (P23135) Cytochrome c1 precursor|
          Length = 272

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 322 EWWEKLQWENRDEVAYLDSKYF 257
           EWW K Q E   EVA+ ++KYF
Sbjct: 168 EWWVKQQQEKGLEVAFNEAKYF 189



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>MOT5_HUMAN (O15374) Monocarboxylate transporter 5 (MCT 5) (MCT 4)|
          Length = 487

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = -3

Query: 240 TPIPMAFVWHAG*VLSSFFTQIRDLLLNCLKFVCVTL*LLYVVRTAFLYMVYSAI 76
           T I  AFV   G ++SS+ T I         F+CVT+ LL  + +AFLY V + +
Sbjct: 89  TSILGAFVVTGGYLISSWATSI--------PFLCVTMGLLPGLGSAFLYQVAAVV 135



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>RPS5_ARATH (O64973) Disease resistance protein RPS5 (Resistance to Pseudomonas|
           syringae protein 5) (pNd3/pNd10)
          Length = 889

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 412 LRVENCPNLRSIPLSSTHNYG--KLKQICSSVEWWEKLQWENR 290
           + VE C  LR +PL S       +L       EW E+++WE++
Sbjct: 830 IHVEKCEKLRKLPLDSKSGIAGEELVIYYGEREWIERVEWEDQ 872



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>DRL24_ARATH (O23317) Probable disease resistance protein At4g14610 (pCol1)|
          Length = 719

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -2

Query: 403 ENCPNLRSIPLSSTHNYGKLKQICSSVE--WWEKLQWENR 290
           E+CP L+ +PL+S      ++ +    E  W E ++WE++
Sbjct: 665 EHCPKLKKLPLNSKSGTAGVELVVKYGENKWLEGVEWEDK 704



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>DRL1_ARATH (P60838) Probable disease resistance protein At1g12280|
          Length = 894

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -2

Query: 412 LRVENCPNLRSIPLSSTHNYGKLKQIC--SSVEWWEKLQWEN 293
           + +  CP LR +PL S       + +      EW E+++W+N
Sbjct: 829 IHITKCPELRKLPLDSEIAIRDEELVIKYQEEEWLERVEWDN 870



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>DRL20_ARATH (Q9SH22) Putative disease resistance protein At1g63360|
          Length = 884

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = -2

Query: 412 LRVENCPNLRSIPLSSTH-NYGKLKQICSSVE--WWEKLQWENRDEVAYLDSKYFIP 251
           + +  CPNLR +PL ST    G+   I  + +  W+E ++W   DE      K F+P
Sbjct: 825 INIRECPNLRKLPLDSTSGKQGENGCIIRNKDSRWFEGVKW--ADEAT---KKRFLP 876



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>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3|
          Length = 465

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = -2

Query: 142 MCDVVASVRC*NCILVHGILCNLLILHSCNTICLLKSQSIRVC 14
           +C +++SV    C+ V   +C  ++  +C  +C+++S  + VC
Sbjct: 365 LCSILSSVCVCVCVCVCMYVCMCVMESACVYVCVMESACVCVC 407



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>BIOF_ECOLI (P12998) 8-amino-7-oxononanoate synthase (EC 2.3.1.47) (AONS)|
           (8-amino-7-ketopelargonate synthase)
           (7-keto-8-amino-pelargonic acid synthetase) (7-KAP
           synthetase) (L-alanine--pimelyl CoA ligase)
          Length = 384

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 302 VGK*GRGGISGQQVLHSNLTEPQFQWLLYGMQVEF 198
           +G  G G +SG  V+H  L E   +WL Y   + F
Sbjct: 71  IGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLF 105



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>HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specific|
           transcription factor HBP1)
          Length = 349

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +1

Query: 271 PDMPPRPYFPTAVSPTIQLNYISASTSHSYVWSSAGCFSDLGNSPP 408
           P MPP  +FP  V+         A  +H Y+W         G  PP
Sbjct: 43  PAMPPHGFFPPPVA---------AGQAHPYMWGPQHMVPPYGTPPP 79



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>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor|
          Length = 1169

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +1

Query: 166 EISYLCEE*RQNSTCMPYKSHWNWGSVRLE*STCCPDMPPRPYF-PTAVSPTIQLNYISA 342
           E+   C E    ST  PY +  +W S   E  T C +     Y  P   S T   NY S+
Sbjct: 525 EVCTECTETESTSTSTPYVTSSSWSS--SEVCTECTETESTSYVTPYVSSSTAAANYTSS 582

Query: 343 STSHSYV 363
            +S S V
Sbjct: 583 FSSSSEV 589



 Score = 28.1 bits (61), Expect = 8.3
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +1

Query: 166 EISYLCEE*RQNSTCMPYKSHWNWGSVRLE*STCCPDMPPRPYF-PTAVSPTIQLNYISA 342
           E+   C E    ST  PY +  +W S   E  T C +     Y  P   S T   NY S+
Sbjct: 399 EVCTECTETESTSTSTPYVTSSSWSS--SEVCTECTETESTSYVTPYVSSSTAAANYTSS 456

Query: 343 STSHSYV 363
            +S S V
Sbjct: 457 FSSSSEV 463



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>DRL15_ARATH (Q940K0) Probable disease resistance protein At1g61180|
          Length = 889

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
 Frame = -2

Query: 406 VENCPNLRSIPLSSTHNYGKLKQ----ICSSVEWWEKLQWENRD-EVAYLDS----KYFI 254
           V NCP LR +PL++T +  K+++    +    E   +L+WE+ D +  +L S    KYF+
Sbjct: 822 VSNCPKLRKLPLNAT-SVSKVEEFEIHMYPPPEQENELEWEDDDTKNRFLPSIKPYKYFV 880



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>RFL1_ARATH (Q8L3R3) Disease resistance protein RFL1 (RPS5-like protein 1)|
           (pNd13/pNd14)
          Length = 885

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -2

Query: 406 VENCPNLRSIPLSSTHNYGKLKQIC---SSVEWWEKLQWEN 293
           + NCP LR +PL S  +  K+++        +W E+++WE+
Sbjct: 832 LNNCPKLRKLPLDS-KSVVKVEEFVIKYKEKKWIERVEWED 871



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>DRL38_ARATH (Q9LVT3) Putative disease resistance protein At5g47260|
          Length = 885

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
 Frame = -2

Query: 412 LRVENCPNLRSIPLSSTHNYGKL------KQICSSVEWWEKLQWENRDEVAYLDSKYFIP 251
           L +  CP LR +P +S    G        +Q+   VEW ++     +   ++ +++Y +P
Sbjct: 808 LVIRRCPELRRLPFNSESTIGNQVETIIEEQVIKIVEWEDE---ATKQRFSHFNNRYLLP 864


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,878,981
Number of Sequences: 219361
Number of extensions: 1263443
Number of successful extensions: 3079
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3074
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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