Clone Name | rbastl53b03 |
---|---|
Clone Library Name | barley_pub |
>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 634 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 177 CN*PQSCLVARMDRHATCTHFGGHVGVELVVSFDLKLICICI 52 CN +S LV D TH G +GV SF +L+C+ + Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427
>PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-)| Length = 758 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 20 SSKDVTFSTHLIHIQISLRSKDTTSSTPTCP 112 SSK + S+HL H+ + S +T + TCP Sbjct: 145 SSKSGSLSSHLFHLATAFGSPNTFTHASTCP 175
>LSHB_HORSE (P08751) Lutropin/choriogonadotropin beta chain precursor| (LSH-B/CG-B) (Lutenizing hormone beta subunit) Length = 169 Score = 28.5 bits (62), Expect = 4.3 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = -1 Query: 168 PQSCLVARMDRHATCTHFGGHVGVELVVSFDLKLICICIKCVLKVTSLELIR 13 PQ R R A+ G GV+ +VSF + L C C C +K T + R Sbjct: 73 PQPVCTYRELRFASIRLPGCPPGVDPMVSFPVALSCHCGPCQIKTTDCGVFR 124
>CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase)| Length = 750 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -1 Query: 333 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 223 P + +MQ FGV ++ +G RH F + HLG+ Sbjct: 228 PRSYRMMQGFGVNTFALVNKEGKRHFVKFHWIPHLGV 264
>CATA_EMENI (P55305) Catalase A (EC 1.11.1.6) (Spore-specific catalase)| Length = 744 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -1 Query: 333 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 223 P + +MQ FGV ++ +G RH F + HLG+ Sbjct: 228 PRSYRMMQGFGVNTFSLVNKEGKRHFVKFHWIPHLGV 264
>LSHB_EQUBU (O46641) Lutropin/choriogonadotropin beta chain precursor| (LSH-B/CG-B) (Lutenizing hormone beta subunit) Length = 169 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = -1 Query: 168 PQSCLVARMDRHATCTHFGGHVGVELVVSFDLKLICICIKCVLKVT 31 PQ R R A+ G GV+ +VSF + L C C C LK T Sbjct: 73 PQPVCTYRELRFASIRLPGCPPGVDPMVSFPVALSCHCGPCRLKTT 118
>LOX15_PONPY (Q5RBE8) Arachidonate 15-lipoxygenase (EC 1.13.11.33) (Arachidonate| omega-6 lipoxygenase) (15-LOX) Length = 661 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -2 Query: 266 VVTEDPSLCSYTSAFAGGSSKNIFIPSTRAVTNRNLVWLPEWTG 135 ++T+D C++ S G+ + P R V ++ LPE TG Sbjct: 69 LLTDDAWFCNWISVQGPGAGDEVRFPCYRWVEGNGVLSLPEGTG 112
>M4A8A_MOUSE (Q99N10) Membrane-spanning 4-domains subfamily A member 8A (CD20| antigen-like 5) (Fragment) Length = 287 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +1 Query: 97 NSYMSTKVGTSGMPVHSGNQTRLRLVTALVDGIKMFLDEPPA 222 NSY MP++ NQ ++ +++ + G+ + EPPA Sbjct: 56 NSYPVVPGTVPQMPIYPSNQPQVHVISGHLPGLVPAMTEPPA 97
>RIF1_MOUSE (Q6PR54) Telomere-associated protein RIF1 (Rap1-interacting factor| 1 homolog) (mRif1) Length = 2419 Score = 27.3 bits (59), Expect = 9.6 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 139 VHSGNQTRLRLVTALVDGIKMFLDEPPANAEV*EHSEGSSVTTTFTSEHAMLGNSKN 309 VHS + LR TAL G+ + L + A + EH +TT SE L +KN Sbjct: 193 VHSAQKVHLRGATALEMGMPLLLQKQQEIALITEH----LMTTKLISELQKLFKNKN 245
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -2 Query: 230 SAFAGGSSKNIFIPSTRAVTNRNLVWLPEWTGMPLVPTL 114 S GG S + R +T R+ W WTG P V L Sbjct: 1122 SDLKGGLSALLAALGNRILTKRSHAWAGNWTGAPDVSAL 1160
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -2 Query: 230 SAFAGGSSKNIFIPSTRAVTNRNLVWLPEWTGMPLVPTL 114 S GG S + R +T R+ W WTG P V L Sbjct: 1122 SDLKGGLSALLAALGNRILTKRSHAWAGNWTGAPDVSAL 1160
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -2 Query: 230 SAFAGGSSKNIFIPSTRAVTNRNLVWLPEWTGMPLVPTL 114 S GG S + R +T R+ W WTG P V L Sbjct: 1122 SDLKGGLSALLAALGNRILTKRSHAWAGNWTGAPDVSAL 1160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,148,800 Number of Sequences: 219361 Number of extensions: 1209543 Number of successful extensions: 3139 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3092 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3139 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)