ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E75_MANSE (Q08893) Ecdysone-inducible protein E75 28 6.4
2SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor 28 8.4

>E75_MANSE (Q08893) Ecdysone-inducible protein E75|
          Length = 699

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 24  GEKSHVKTIGTAIGCKQPRTKLIYH 98
           G + H + +GT  GC  PR+ L  H
Sbjct: 490 GNEKHERIVGTGSGCSSPRSSLEEH 514



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>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 75  PRTKLIYHLTTKTRKVKITTATALTT 152
           P+TK   H T KT+  K TT T  TT
Sbjct: 138 PKTKPTKHTTPKTKPTKHTTPTTTTT 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,875,809
Number of Sequences: 219361
Number of extensions: 351539
Number of successful extensions: 964
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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