>emb|AL672143.12| Mouse DNA sequence from clone RP23-467P3 on chromosome 11 Contains
           part of a novel gene, complete sequence
          Length = 170167

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  catggagaaaaatctcatgtg 41
           |||||||||||||||||||||
Sbjct: 229 catggagaaaaatctcatgtg 209

>emb|AL669846.11| Mouse DNA sequence from clone RP23-298L23 on chromosome 11 Contains the
              Srfcp-pending gene for SRF co-factor protein, a novel gene
              (A730013G04) and a CpG island, complete sequence
          Length = 128747

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     catggagaaaaatctcatgtg 41
              |||||||||||||||||||||
Sbjct: 126976 catggagaaaaatctcatgtg 126956

>emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, complete sequence
          Length = 155612

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 23    tggagaaaaatctcatgtgaaaact 47
             |||||||||| ||||||||||||||
Sbjct: 58020 tggagaaaaacctcatgtgaaaact 57996

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    acaactgcaacagcacttac 148
              ||||||||||||||||||||
Sbjct: 376785 acaactgcaacagcacttac 376766

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    acaactgcaacagcacttac 148
              ||||||||||||||||||||
Sbjct: 307619 acaactgcaacagcacttac 307638



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    acaactgcaacagcacttac 148
              ||||||||||||||||||||
Sbjct: 178927 acaactgcaacagcacttac 178946

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    acaactgcaacagcacttac 148
              ||||||||||||||||||||
Sbjct: 269435 acaactgcaacagcacttac 269416

>gb|AF239159.2| Sugarcane streak Egypt virus - [Naga], complete genome
          Length = 2706

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 103 ctaccaaaacaagaaaggtgaaaatcac 130
           |||||||| ||| |||||||||||||||
Sbjct: 270 ctaccaaagcaacaaaggtgaaaatcac 243

>gb|AF037752.1| Sugarcane streak Egypt virus - [Giza], complete genome
          Length = 2706

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 103 ctaccaaaacaagaaaggtgaaaatcac 130
           |||||||| ||| |||||||||||||||
Sbjct: 270 ctaccaaagcaacaaaggtgaaaatcac 243

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acaactgcaacagcacttac 148
             ||||||||||||||||||||
Sbjct: 66640 acaactgcaacagcacttac 66659

>emb|AL139376.17| Human DNA sequence from clone RP11-23E3 on chromosome 13 Contains a
             novel gene, the CLDN10 gene for claudin 10 (OSP-L,
             CPETRL3), the gene for novel zinc-finger protein (DZIP1,
             KIAA0996) and 3 CpG islands, complete sequence
          Length = 152794

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   aacaagaaaggtgaaaatcacaac 133
             ||||||||||||||||||| ||||
Sbjct: 93146 aacaagaaaggtgaaaatctcaac 93169

>emb|AL031584.2|HS1158E12 Human DNA sequence from clone RP5-1158E12 on chromosome Xp11.23-11.4
             Contains a pseudogene similar to part of splicing factor,
             arginine/serine-rich 6 (B52, SRP55) (SFRS6), two novel
             genes and a CpG island, complete sequence
          Length = 163871

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    gttgcatggagaaaaatctc 36
             ||||||||||||||||||||
Sbjct: 50326 gttgcatggagaaaaatctc 50345

>gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, complete sequence
          Length = 197709

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    accaaattaatctatcactt 100
             ||||||||||||||||||||
Sbjct: 47844 accaaattaatctatcactt 47825

>gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, complete sequence
          Length = 197868

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aaaaatctcatgtgaaaact 47
             ||||||||||||||||||||
Sbjct: 27517 aaaaatctcatgtgaaaact 27498

>emb|BX005189.9| Mouse DNA sequence from clone RP23-170L24 on chromosome X, complete
             sequence
          Length = 206372

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   caagaaaggtgaaaatcaca 131
             ||||||||||||||||||||
Sbjct: 19212 caagaaaggtgaaaatcaca 19231

>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acaactgcaacagcacttac 148
             ||||||||||||||||||||
Sbjct: 39496 acaactgcaacagcacttac 39515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,986,379
Number of Sequences: 3902068
Number of extensions: 1986379
Number of successful extensions: 129614
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129558
Number of HSP's gapped (non-prelim): 56
length of query: 221
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 199
effective length of database: 17,147,199,772
effective search space: 3412292754628
effective search space used: 3412292754628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)