ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009089.1| Triticum aestivum clone wkm2c.pk0002.a3:fis, full... 490 e-135
2gb|AY109428.1| Zea mays CL501_1 mRNA sequence 103 5e-19
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 92 2e-15
4gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare str... 92 2e-15
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
6dbj|AK071247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
7dbj|AK069084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
8dbj|AK059077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
9dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
10gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, comple... 44 0.37
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
12dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
13dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
14emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, ... 42 1.5
15emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BA... 42 1.5
16emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chr... 42 1.5
17ref|NM_202601.1| Arabidopsis thaliana unknown protein AT3G17860 ... 40 5.7
18ref|NM_112667.2| Arabidopsis thaliana unknown protein AT3G17860 ... 40 5.7
19gb|AC145791.2| Xenopus tropicalis clone CH216-136M10, complete s... 40 5.7
20gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome... 40 5.7
21gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 40 5.7
22emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, comple... 40 5.7
23gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complet... 40 5.7
24emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 i... 40 5.7
25emb|AL160159.12| Human DNA sequence from clone RP11-71K7 on chro... 40 5.7
26emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G1... 40 5.7
27gb|AF517750.1| Mus musculus chromosome 18 NFS107 proviral integr... 40 5.7
28gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 gen... 40 5.7
29emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 ... 40 5.7
30gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct... 40 5.7
31dbj|AK136716.1| Mus musculus adult male epididymis cDNA, RIKEN f... 40 5.7
32dbj|AK222169.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 5.7
33gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's H... 40 5.7
34gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome... 40 5.7
35gb|AF372907.1|AF372907 Arabidopsis thaliana AT3g17860/MEB5_8 mRN... 40 5.7
36gb|AF298202.1| Dictyostelium discoideum putative transposon DDT-... 40 5.7
37tpg|BK001437.1| TPA: TPA_exp: Homo sapiens SULT6B1 (SULT6B1) gen... 40 5.7
38gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9... 40 5.7
39dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
40emb|BX822774.1|CNS0A63D Arabidopsis thaliana Full-length cDNA Co... 40 5.7
41emb|BX822297.1|CNS0A611 Arabidopsis thaliana Full-length cDNA Co... 40 5.7
42emb|BX824913.1|CNS0A5NW Arabidopsis thaliana Full-length cDNA Co... 40 5.7
43emb|BX824776.1|CNS0A5NG Arabidopsis thaliana Full-length cDNA Co... 40 5.7
44emb|BX822695.1|CNS0A5WD Arabidopsis thaliana Full-length cDNA Co... 40 5.7
45emb|BX824527.1|CNS0A4QA Arabidopsis thaliana Full-length cDNA Co... 40 5.7
46gb|AC007899.3| Homo sapiens BAC clone RP11-531C11 from 2, comple... 40 5.7
47gb|AY085082.1| Arabidopsis thaliana clone 12707 mRNA, complete s... 40 5.7
48emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chro... 40 5.7
49dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.7
50dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
51emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 i... 40 5.7
52emb|BX547927.10| Zebrafish DNA sequence from clone CH211-194E15 ... 40 5.7
53gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence 40 5.7
54emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in... 40 5.7
55gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete ge... 40 5.7
56gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
57emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chrom... 40 5.7

>gb|BT009089.1| Triticum aestivum clone wkm2c.pk0002.a3:fis, full insert mRNA
           sequence
          Length = 774

 Score =  490 bits (247), Expect = e-135
 Identities = 351/384 (91%), Gaps = 5/384 (1%)
 Strand = Plus / Minus

                                                                       
Query: 47  gatatacaatttatgcggcacaaaatgtccaggatgagtatccctaga---aaattctga 103
           ||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||
Sbjct: 695 gatatacaatttatgcggcacaaaatgtccaggttgagtatccctagaggaaaattctga 636

                                                                       
Query: 104 aaccaagaaactaacagcttaaatacggtaaagtagaagtaacacaataacaacacaata 163
           ||||||||||||||||| ||||||||||| |  ||  ||| | |||||||||||||||||
Sbjct: 635 aaccaagaaactaacagtttaaatacggtgatctaatagttatacaataacaacacaata 576

                                                                       
Query: 164 caattcacactaacttccatgaaacagcacagctgt--atgctcataactgaataatttt 221
           ||||||||||||||||||||| ||||||||  ||||  ||||||||||| ||||||||||
Sbjct: 575 caattcacactaacttccatggaacagcacgcctgtgtatgctcataaccgaataatttt 516

                                                                       
Query: 222 gacggaatatccatccttaagttacccgtcacttacttgataagagactccatagcttca 281
           ||||||||| | ||| | ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 515 gacggaataccgatcttcaagtttcccgtcacttaattgataagagactccatagcttca 456

                                                                       
Query: 282 aagaatagaggcacaaacttcctgtttggagtcttcactgcacactttgcaccaggagca 341
           ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||
Sbjct: 455 aagaatagaggcacaaactccctgtttggagtcttgactgcacacttggcaccaggaaca 396

                                                                       
Query: 342 ccaacggcagcagtaagctctatcaggaatggagtcccacgggggatcttcgcagacaga 401
           ||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||||||
Sbjct: 395 ccaacagcagcagtaagctctatcagaaatggaatcccacgggggaccttcgcagacaga 336

                                   
Query: 402 tacagcacatccatatttgcattt 425
           |||||||||||||| |||||||||
Sbjct: 335 tacagcacatccatgtttgcattt 312



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   ctatgacatagcaagaaaaa 26
           ||||||||||||||||||||
Sbjct: 726 ctatgacatagcaagaaaaa 707



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>gb|AY109428.1| Zea mays CL501_1 mRNA sequence
          Length = 3187

 Score =  103 bits (52), Expect = 5e-19
 Identities = 127/152 (83%)
 Strand = Plus / Plus

                                                                       
Query: 264 agagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtcttcactgca 323
           |||| |||||||||||||||||| ||||| || | || ||| ||||| || || ||||||
Sbjct: 356 agagcctccatagcttcaaagaagagaggaaccatctccctatttggtgttttgactgca 415

                                                                       
Query: 324 cactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggagtcccacgg 383
           |||||  |||||||| ||||||| ||||| |||| |||||| ||||| ||  | ||||||
Sbjct: 416 cacttcacaccaggaacaccaaccgcagctgtaacctctataaggaaggggattccacgg 475

                                           
Query: 384 gggatcttcgcagacagatacagcacatccat 415
           || |||||||| || |||||||| ||||||||
Sbjct: 476 ggcatcttcgcggagagatacagaacatccat 507



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 130/158 (82%)
 Strand = Plus / Plus

                                                                            
Query: 256      acttgataagagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtct 315
                |||||| |||||||||||| ||||| ||||| |||| ||| | || | |||||||||| |
Sbjct: 13561552 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13561611

                                                                            
Query: 316      tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggag 375
                | || ||||||||  | |||||| |||| || ||||||||||||||||||||||| ||  
Sbjct: 13561612 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 13561671

                                                      
Query: 376      tcccacgggggatcttcgcagacagatacagcacatcc 413
                | ||||| || ||||| |||||||  ||||| ||||||
Sbjct: 13561672 ttccacgcggaatctttgcagacatgtacagaacatcc 13561709



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>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0005A11, from chromosome 3, complete sequence
          Length = 168219

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 130/158 (82%)
 Strand = Plus / Plus

                                                                          
Query: 256    acttgataagagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtct 315
              |||||| |||||||||||| ||||| ||||| |||| ||| | || | |||||||||| |
Sbjct: 121443 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 121502

                                                                          
Query: 316    tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggag 375
              | || ||||||||  | |||||| |||| || ||||||||||||||||||||||| ||  
Sbjct: 121503 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 121562

                                                    
Query: 376    tcccacgggggatcttcgcagacagatacagcacatcc 413
              | ||||| || ||||| |||||||  ||||| ||||||
Sbjct: 121563 ttccacgcggaatctttgcagacatgtacagaacatcc 121600



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 130/158 (82%)
 Strand = Plus / Plus

                                                                            
Query: 256      acttgataagagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtct 315
                |||||| |||||||||||| ||||| ||||| |||| ||| | || | |||||||||| |
Sbjct: 13557427 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13557486

                                                                            
Query: 316      tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggag 375
                | || ||||||||  | |||||| |||| || ||||||||||||||||||||||| ||  
Sbjct: 13557487 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 13557546

                                                      
Query: 376      tcccacgggggatcttcgcagacagatacagcacatcc 413
                | ||||| || ||||| |||||||  ||||| ||||||
Sbjct: 13557547 ttccacgcggaatctttgcagacatgtacagaacatcc 13557584



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>dbj|AK071247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087B10, full
            insert sequence
          Length = 1904

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 256  acttgataagagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtct 315
            |||||| |||||||||||| ||||| ||||| |||| ||| | || | |||||||||| |
Sbjct: 1728 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1669

                                                                        
Query: 316  tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggag 375
            | || ||||||||  | |||||| |||| || ||||||||||||||||||||||| ||  
Sbjct: 1668 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 1609

                                                  
Query: 376  tcccacgggggatcttcgcagacagatacagcacatcc 413
            | ||||| || ||||| |||||||  ||||| ||||||
Sbjct: 1608 ttccacgcggaatctttgcagacatgtacagaacatcc 1571



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>dbj|AK069084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007F10, full
            insert sequence
          Length = 1842

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 256  acttgataagagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtct 315
            |||||| |||||||||||| ||||| ||||| |||| ||| | || | |||||||||| |
Sbjct: 1479 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1420

                                                                        
Query: 316  tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggag 375
            | || ||||||||  | |||||| |||| || ||||||||||||||||||||||| ||  
Sbjct: 1419 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 1360

                                                  
Query: 376  tcccacgggggatcttcgcagacagatacagcacatcc 413
            | ||||| || ||||| |||||||  ||||| ||||||
Sbjct: 1359 ttccacgcggaatctttgcagacatgtacagaacatcc 1322



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>dbj|AK059077.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A07, full
           insert sequence
          Length = 834

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                       
Query: 256 acttgataagagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtct 315
           |||||| |||||||||||| ||||| ||||| |||| ||| | || | |||||||||| |
Sbjct: 546 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 487

                                                                       
Query: 316 tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggag 375
           | || ||||||||  | |||||| |||| || ||||||||||||||||||||||| ||  
Sbjct: 486 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaagggga 427

                                                 
Query: 376 tcccacgggggatcttcgcagacagatacagcacatcc 413
           | ||||| || ||||| |||||||  ||||| ||||||
Sbjct: 426 ttccacgcggaatctttgcagacatgtacagaacatcc 389



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>dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D19, full
            insert sequence
          Length = 2979

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 124/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 263  aagagactccatagcttcaaagaatagaggcacaaacttcctgtttggagtcttcactgc 322
            |||||||||||| ||||| ||||| |||| ||| | || | |||||||||| || || ||
Sbjct: 2706 aagagactccatggcttcgaagaagagagccaccatctccttgtttggagttttgaccgc 2647

                                                                        
Query: 323  acactttgcaccaggagcaccaacggcagcagtaagctctatcaggaatggagtcccacg 382
            ||||||  | |||||| |||| || ||||||||||||||||||||||| ||  | |||||
Sbjct: 2646 acacttcacgccaggaacaccgactgcagcagtaagctctatcaggaaggggattccacg 2587

                                           
Query: 383  ggggatcttcgcagacagatacagcacatcc 413
             || ||||| |||||||  ||||| ||||||
Sbjct: 2586 cggaatctttgcagacatgtacagaacatcc 2556



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>gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, complete sequence
          Length = 95280

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 203   ctcataactgaataattttgac 224
             ||||||||||||||||||||||
Sbjct: 57533 ctcataactgaataattttgac 57512



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 69      aaatgtccaggatgagtatccc 90
               ||||||||||||||||||||||
Sbjct: 7266918 aaatgtccaggatgagtatccc 7266897



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>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           BAC clone:OSJNBa0062A09
          Length = 173541

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 69  aaatgtccaggatgagtatccc 90
           ||||||||||||||||||||||
Sbjct: 881 aaatgtccaggatgagtatccc 860



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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1381_H04
          Length = 130961

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 69     aaatgtccaggatgagtatccc 90
              ||||||||||||||||||||||
Sbjct: 119023 aaatgtccaggatgagtatccc 119002



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>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54
          Length = 198715

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    ataacaacacaatacaattca 170
              |||||||||||||||||||||
Sbjct: 188407 ataacaacacaatacaattca 188427



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>emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K22 (ESSAII project)
          Length = 89219

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 150   ataacaacacaatacaattca 170
             |||||||||||||||||||||
Sbjct: 45130 ataacaacacaatacaattca 45150



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>emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chromosome 4, complete
             sequence
          Length = 206914

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    aaaggcaagatatacaattta 59
             |||||||||||||||||||||
Sbjct: 50133 aaaggcaagatatacaattta 50153



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>ref|NM_202601.1| Arabidopsis thaliana unknown protein AT3G17860 transcript variant
            AT3G17860.2 mRNA, complete cds
          Length = 1370

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1087 cacatccatatttgcatttc 1106



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>ref|NM_112667.2| Arabidopsis thaliana unknown protein AT3G17860 transcript variant
            AT3G17860.1 mRNA, complete cds
          Length = 1580

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1297 cacatccatatttgcatttc 1316



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>gb|AC145791.2| Xenopus tropicalis clone CH216-136M10, complete sequence
          Length = 138176

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    cagcacatccatatttgcat 423
              ||||||||||||||||||||
Sbjct: 116229 cagcacatccatatttgcat 116248



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>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence
          Length = 232320

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    aataacaacacaatacaatt 168
              ||||||||||||||||||||
Sbjct: 151220 aataacaacacaatacaatt 151239



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>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    aataacaacacaatacaatt 168
              ||||||||||||||||||||
Sbjct: 196667 aataacaacacaatacaatt 196648



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>emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, complete sequence
          Length = 31143

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    aattctgaaaccaagaaact 115
             ||||||||||||||||||||
Sbjct: 26630 aattctgaaaccaagaaact 26611



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>gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complete sequence
          Length = 181588

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 403    acagcacatccatatttgcatttc 426
              ||||||||| ||||||||||||||
Sbjct: 135647 acagcacatacatatttgcatttc 135624



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>emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 in linkage group 7,
             complete sequence
          Length = 168455

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tagaagtaacacaataacaa 156
             ||||||||||||||||||||
Sbjct: 80485 tagaagtaacacaataacaa 80504



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>emb|AL160159.12| Human DNA sequence from clone RP11-71K7 on chromosome 13, complete
             sequence
          Length = 129575

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    tcaaaggcaagatatacaatttat 60
             ||||||||||||| ||||||||||
Sbjct: 29688 tcaaaggcaagatttacaatttat 29711



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>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3
             Contains the 3' part of a novel gene, complete sequence
          Length = 88509

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   aagtaacacaataacaacacaata 163
             |||||||||||||| |||||||||
Sbjct: 22962 aagtaacacaataataacacaata 22939



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>gb|AF517750.1| Mus musculus chromosome 18 NFS107 proviral integration site
          Length = 1655

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 aataacaacacaatacaatt 168
           ||||||||||||||||||||
Sbjct: 52  aataacaacacaatacaatt 71



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>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete
              sequence
          Length = 149978

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 256    acttgataagagactccatagcttcaaagaatagag 291
              |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 109697 acttgagaagagactccatggcttcgaagaagagag 109662



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>emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 in linkage group 16,
              complete sequence
          Length = 165294

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtaaagtagaagtaacacaa 150
              ||||||||||||||||||||
Sbjct: 116674 gtaaagtagaagtaacacaa 116693



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>gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct7-295g23, complete
             sequence
          Length = 115747

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ttccatgaaacagcacagct 197
             ||||||||||||||||||||
Sbjct: 33060 ttccatgaaacagcacagct 33041



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>dbj|AK136716.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched
           library, clone:9230028P05 product:unclassifiable, full
           insert sequence
          Length = 1057

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ttccatgaaacagcacagct 197
           ||||||||||||||||||||
Sbjct: 543 ttccatgaaacagcacagct 562



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>dbj|AK222169.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL23-30-L21
          Length = 1307

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1016 cacatccatatttgcatttc 1035



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>gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 228097

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    ctagaaaattctgaaaccaa 109
             ||||||||||||||||||||
Sbjct: 16993 ctagaaaattctgaaaccaa 17012



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>gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome 14, complete sequence
          Length = 215658

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   acaataacaacacaatacaattca 170
             |||||||||||| |||||||||||
Sbjct: 47726 acaataacaacaaaatacaattca 47749



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>gb|AF372907.1|AF372907 Arabidopsis thaliana AT3g17860/MEB5_8 mRNA, complete cds
          Length = 1578

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1297 cacatccatatttgcatttc 1316



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>gb|AF298202.1| Dictyostelium discoideum putative transposon DDT-B, complete
           sequence
          Length = 5471

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 aacacaataacaacacaata 163
           ||||||||||||||||||||
Sbjct: 797 aacacaataacaacacaata 778



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 aacacaataacaacacaata 163
           ||||||||||||||||||||
Sbjct: 752 aacacaataacaacacaata 733



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>tpg|BK001437.1| TPA: TPA_exp: Homo sapiens SULT6B1 (SULT6B1) gene, complete cds;
             alternatively spliced
          Length = 34001

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   atgctcataactgaataatt 219
             ||||||||||||||||||||
Sbjct: 22591 atgctcataactgaataatt 22610



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>gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9, complete sequence
          Length = 191373

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    aaaattctgaaaccaagaaa 113
             ||||||||||||||||||||
Sbjct: 33949 aaaattctgaaaccaagaaa 33968



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 256      acttgataagagactccatagcttcaaagaatagag 291
                |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 16491598 acttgagaagagactccatggcttcgaagaagagag 16491563



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>emb|BX822774.1|CNS0A63D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB63ZE05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 976

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 cacatccatatttgcatttc 426
           ||||||||||||||||||||
Sbjct: 812 cacatccatatttgcatttc 831



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>emb|BX822297.1|CNS0A611 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB27ZB09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1436

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1193 cacatccatatttgcatttc 1212



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>emb|BX824913.1|CNS0A5NW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH82ZB08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1327

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1087 cacatccatatttgcatttc 1106



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>emb|BX824776.1|CNS0A5NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH71ZB02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1454

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1228 cacatccatatttgcatttc 1247



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>emb|BX822695.1|CNS0A5WD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB58ZG10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1475

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1226 cacatccatatttgcatttc 1245



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>emb|BX824527.1|CNS0A4QA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH54ZC12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1492

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1238 cacatccatatttgcatttc 1257



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>gb|AC007899.3| Homo sapiens BAC clone RP11-531C11 from 2, complete sequence
          Length = 118195

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   atgctcataactgaataatt 219
             ||||||||||||||||||||
Sbjct: 13587 atgctcataactgaataatt 13606



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>gb|AY085082.1| Arabidopsis thaliana clone 12707 mRNA, complete sequence
          Length = 1535

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  cacatccatatttgcatttc 426
            ||||||||||||||||||||
Sbjct: 1255 cacatccatatttgcatttc 1274



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>emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chromosome 2, complete
             sequence
          Length = 213629

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ttccatgaaacagcacagct 197
             ||||||||||||||||||||
Sbjct: 57543 ttccatgaaacagcacagct 57524



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>dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEB5
          Length = 74968

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   cacatccatatttgcatttc 426
             ||||||||||||||||||||
Sbjct: 33282 cacatccatatttgcatttc 33301



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>dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G05, full
           insert sequence
          Length = 575

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 256 acttgataagagactccatagcttcaaagaatagag 291
           |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 399 acttgagaagagactccatggcttcgaagaagagag 364



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>emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 in linkage group 20,
              complete sequence
          Length = 158302

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    acaataacaacacaatacaa 166
              ||||||||||||||||||||
Sbjct: 126271 acaataacaacacaatacaa 126290



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>emb|BX547927.10| Zebrafish DNA sequence from clone CH211-194E15 in linkage group 19,
             complete sequence
          Length = 215498

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   cacaaacttcctgtttggag 312
             ||||||||||||||||||||
Sbjct: 21014 cacaaacttcctgtttggag 21033



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>gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence
          Length = 122469

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   cacactttgcaccaggagca 341
             ||||||||||||||||||||
Sbjct: 47122 cacactttgcaccaggagca 47103



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>emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in linkage group 16,
             complete sequence
          Length = 184760

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gtaaagtagaagtaacacaa 150
             ||||||||||||||||||||
Sbjct: 47402 gtaaagtagaagtaacacaa 47383



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gtaaagtagaagtaacacaa 150
             ||||||||||||||||||||
Sbjct: 46938 gtaaagtagaagtaacacaa 46919



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>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 408     acatccatatttgcatttct 427
               ||||||||||||||||||||
Sbjct: 1359986 acatccatatttgcatttct 1360005



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 256      acttgataagagactccatagcttcaaagaatagag 291
                |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 16499839 acttgagaagagactccatggcttcgaagaagagag 16499804



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>emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chromosome 2, complete
             sequence
          Length = 233417

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ttccatgaaacagcacagct 197
             ||||||||||||||||||||
Sbjct: 85626 ttccatgaaacagcacagct 85645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,241,829
Number of Sequences: 3902068
Number of extensions: 4241829
Number of successful extensions: 76722
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76495
Number of HSP's gapped (non-prelim): 224
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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