>NU5C_PACAQ (Q9MVK2) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 5)
           (NADH-plastoquinone oxidoreductase chain 5) (Fragment)
          Length = 709

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 177 LHFPLFTSMCCKTFFGGAIALPKNLPTSIW 266
           +HF LF ++C    F GA+A     P  +W
Sbjct: 221 VHF-LFVTLCASLLFAGAVAKSAQFPLHVW 249

>VNCS_JCDNV (Q90054) Noncapsid protein NS-1 (Nonstructural protein NS1) (NCVP1)|
          Length = 545

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 145 KKDWDSLSHAFYISPCSQVCVVKLFSGGQLLC 240
           +K   +L   +Y+SP S +C V  F    LLC
Sbjct: 271 RKKTKALLRKYYVSPVSAICDVPEFRDDDLLC 302

>NU5C_ANIIN (P51096) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 5)
           (NADH-plastoquinone oxidoreductase chain 5)
          Length = 741

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 192 FTSMCCKTFFGGAIALPKNLPTSIW 266
           F ++C    FGGAIA     P  +W
Sbjct: 225 FVTLCAVLLFGGAIAKSAQFPLHVW 249

>SYLC_CAEEL (Q09996) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 1186

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -2

Query: 262 MLVGKFFGKAIAPPKKVLQHILVNRG 185
           MLVGK+ GK  A  KKV+Q  L   G
Sbjct: 478 MLVGKYAGKKTADVKKVIQDDLTAEG 503

>K1M1_SHEEP (P02534) Keratin, type I microfibrillar 48 kDa, component 8C-1|
           (Low-sulfur keratin)
          Length = 412

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +3

Query: 153 LGFTQSCILHFPLFTSMCCKTFFGGAIALPKNLPTSIWHVPTS*SQHQK 299
           L F  SC    P   S CC T   GA  +P N+ +  W    S   ++K
Sbjct: 9   LSFRSSCSSR-PCVPSSCCGTTLPGACNIPANVGSCNWFCEGSFDGNEK 56

>Y1840_SYNY3 (P73408) Hypothetical protein slr1840|
          Length = 371

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 292 C*DHDVGTCQMLVGKFFGKAIAPPKKVLQHILVNRGKCKMHD*VNPN---LFSLVVDDL 125
           C DH     Q   GK  G  +   KK+ +  ++  G+C++   V PN   +FSLV  D+
Sbjct: 289 CFDH-----QSPQGKVVGGVLELAKKINKPAIIVAGQCQLSQTVLPNVLKIFSLVGPDM 342

>NU5C_MALAR (Q9MVL6) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 5)
           (NADH-plastoquinone oxidoreductase chain 5) (Fragment)
          Length = 707

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 189 LFTSMCCKTFFGGAIALPKNLPTSIW 266
           LF ++C    F GA+A     P  +W
Sbjct: 224 LFVTLCASLLFAGAVAKSAQFPLHVW 249


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,938,698
Number of Sequences: 219361
Number of extensions: 1024399
Number of successful extensions: 2030
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2030
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)