>gb|AC147175.2| Xenopus tropicalis clone CH216-54E8, complete sequence
          Length = 187921

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 232   ttgctttgccaaaaaatttac 252
             |||||||||||||||||||||
Sbjct: 75598 ttgctttgccaaaaaatttac 75618

>emb|BX004979.8| Zebrafish DNA sequence from clone DKEY-121H18 in linkage group 7,
              complete sequence
          Length = 186642

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    ttcactcagtcatgcatttta 179
              |||||||||||||||||||||
Sbjct: 121799 ttcactcagtcatgcatttta 121779

>emb|AL954166.9| Zebrafish DNA sequence from clone DKEYP-120B11 in linkage group 20,
              complete sequence
          Length = 186299

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    ttcactcagtcatgcatttta 179
              |||||||||||||||||||||
Sbjct: 121456 ttcactcagtcatgcatttta 121436

>gb|AF013614.1| Fugu rubripes cosmid 259C6, complete sequence
          Length = 55892

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   gtcatgcattttacatttcc 186
             ||||||||||||||||||||
Sbjct: 41494 gtcatgcattttacatttcc 41475

>gb|AF013613.1| Fugu rubripes cosmid 48D10, complete sequence
          Length = 28199

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  gtcatgcattttacatttcc 186
            ||||||||||||||||||||
Sbjct: 4702 gtcatgcattttacatttcc 4683

>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 32      ctgatgcacaacattgggcaaatg 55
               |||||||||||||| |||||||||
Sbjct: 1156603 ctgatgcacaacatggggcaaatg 1156580

>emb|CT009738.8| Mouse DNA sequence from clone RP23-217H9 on chromosome 12, complete
              sequence
          Length = 209619

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    tgcattttacatttccccct 190
              ||||||||||||||||||||
Sbjct: 112645 tgcattttacatttccccct 112626

>ref|XM_761267.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
           (TP01_0839) partial mRNA
          Length = 519

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 atgtgttgtaaaactttttt 220
           ||||||||||||||||||||
Sbjct: 508 atgtgttgtaaaactttttt 489

>ref|XM_761520.1| Theileria parva strain Muguga chromosome 1 eukaryotic translation
           initiation factor 3 subunit 2 (TP01_1092) partial mRNA
          Length = 1244

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 tctcagcatcaaaaattagg 304
           ||||||||||||||||||||
Sbjct: 438 tctcagcatcaaaaattagg 419

>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence
          Length = 209280

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    tgcattttacatttccccct 190
              ||||||||||||||||||||
Sbjct: 182323 tgcattttacatttccccct 182304

>emb|AL591051.7| Human DNA sequence from clone RP11-613I8 on chromosome 6 Contains a CpG
             island, complete sequence
          Length = 128615

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   atgatctcagcatcaaaaat 300
             ||||||||||||||||||||
Sbjct: 89691 atgatctcagcatcaaaaat 89710

>emb|AL358176.22| Human DNA sequence from clone RP11-467I20 on chromosome 1 Contains
            the gene for protein related to DAN and cerberus
            (FLJ21195), two novel genes, a pseudogene similar to part
            of cytochrome c oxidase I (MTCOI1), a ribosomal protein
            S11 (RPS11) pseudogene, a ferredoxin pseudogene and a CpG
            island, complete sequence
          Length = 184311

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 20   ttacagaaaatactgatgca 39
            ||||||||||||||||||||
Sbjct: 9336 ttacagaaaatactgatgca 9317

>emb|AL354834.17| Human DNA sequence from clone RP11-109J9 on chromosome 20 Contains part
             of the PPP4R1L gene for  protein phosphatase 4 regulatory
             subunit 1-like, complete sequence
          Length = 41032

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     agataaaccatgtttacaga 26
             ||||||||||||||||||||
Sbjct: 23792 agataaaccatgtttacaga 23811

>gb|AC087710.8| Homo sapiens chromosome 8, clone RP11-11A18, complete sequence
          Length = 167139

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    atgtgttgtaaaactttttt 220
              ||||||||||||||||||||
Sbjct: 104465 atgtgttgtaaaactttttt 104484

>ref|NM_079117.2| Drosophila melanogaster nervy CG3385-RA (nvy), mRNA
          Length = 3427

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  cgttcctacgtcatgatctcagca 292
            ||||||| ||||||||||||||||
Sbjct: 2050 cgttcctgcgtcatgatctcagca 2027

>gb|AC102945.2| Homo sapiens chromosome 8, clone CTD-2373N4, complete sequence
          Length = 127677

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 59     tgggagggattacttatgaatatt 82
              ||||||||||||| ||||||||||
Sbjct: 120101 tgggagggattacgtatgaatatt 120078

>gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromosome 1, complete sequence
          Length = 192460

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttacagaaaatactgatgca 39
              ||||||||||||||||||||
Sbjct: 121180 ttacagaaaatactgatgca 121161

>gb|AC008353.4|AC008353 Drosophila melanogaster, chromosome 2R, region 60C-60C, BAC clone
              BACR02A05, complete sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     atgaatattcactcaaatac 93
              ||||||||||||||||||||
Sbjct: 124944 atgaatattcactcaaatac 124925

>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
              BACR04P18, complete sequence
          Length = 159455

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 269    cgttcctacgtcatgatctcagca 292
              ||||||| ||||||||||||||||
Sbjct: 112385 cgttcctgcgtcatgatctcagca 112362

>gb|BT004898.1| Drosophila melanogaster LD17501 full insert cDNA
          Length = 3420

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  cgttcctacgtcatgatctcagca 292
            ||||||| ||||||||||||||||
Sbjct: 2029 cgttcctgcgtcatgatctcagca 2006

>gb|AC007534.2|AC007534 Genomic sequence for Arabidopsis thaliana BAC F7F22 from chromosome I,
              complete sequence
          Length = 118986

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    aaaagattgggattcactca 166
              ||||||||||||||||||||
Sbjct: 104817 aaaagattgggattcactca 104836



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   aaaagattgggattcactca 166
             ||||||||||||||||||||
Sbjct: 92600 aaaagattgggattcactca 92619

>gb|AC103959.18| Homo sapiens chromosome 8, clone GS1-211B7, complete sequence
          Length = 103584

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    tgggagggattacttatgaatatt 82
             ||||||||||||| ||||||||||
Sbjct: 53601 tgggagggattacgtatgaatatt 53578

>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete
             sequence
          Length = 310958

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    atgaatattcactcaaatac 93
             ||||||||||||||||||||
Sbjct: 80122 atgaatattcactcaaatac 80103

>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete
              sequence
          Length = 298827

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 269    cgttcctacgtcatgatctcagca 292
              ||||||| ||||||||||||||||
Sbjct: 211786 cgttcctgcgtcatgatctcagca 211763

>dbj|AP002979.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1057H12
          Length = 153647

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    atgtgttgtaaaactttttt 220
              ||||||||||||||||||||
Sbjct: 145831 atgtgttgtaaaactttttt 145812

>emb|AL049734.11|HSJ154J13 Human DNA sequence from clone RP1-154J13 on chromosome Xq26.1-26.3
             Contains a seven transmembrane helix receptor pseudogene,
             a pseudogene similar to part of seven transmembrane helix
             receptor, a pseudogene similar to part of PYRIN-containing
             Apaf1-like protein 3 (PYPAF3) and the gene for a novel
             protein similar to seven transmembrane helix receptor
             (FLJ31393), complete sequence
          Length = 126766

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 68    ttacttatgaatattcactcaaataccc 95
             ||||| ||||||||| ||||||||||||
Sbjct: 81968 ttactcatgaatattgactcaaataccc 81941

>emb|BX005190.8| Mouse DNA sequence from clone RP23-383A22 on chromosome X, complete
              sequence
          Length = 212955

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     attacttatgaatattcact 86
              ||||||||||||||||||||
Sbjct: 151296 attacttatgaatattcact 151277

>gb|AC140407.5| Mus musculus BAC clone RP23-142K9 from chromosome unknown, complete
              sequence
          Length = 193404

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     attacttatgaatattcact 86
              ||||||||||||||||||||
Sbjct: 129077 attacttatgaatattcact 129058

>gb|U21717.1|DMU21717 Drosophila melanogaster nervy (nvy) mRNA, complete cds
          Length = 3243

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  cgttcctacgtcatgatctcagca 292
            ||||||| ||||||||||||||||
Sbjct: 1855 cgttcctgcgtcatgatctcagca 1832


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,465,310
Number of Sequences: 3902068
Number of extensions: 3465310
Number of successful extensions: 65215
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65165
Number of HSP's gapped (non-prelim): 50
length of query: 314
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 292
effective length of database: 17,147,199,772
effective search space: 5006982333424
effective search space used: 5006982333424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)