>AL7A1_BRANA (Q41247) Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)|
           (Antiquitin-1) (Brassica
           turgor-responsive/drought-induced gene 26 protein)
           (Btg-26)
          Length = 493

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -2

Query: 274 GSMIPLEQHGCRVCFPNHLALEMLNPLGM 188
           GS+IP E+       PNH+ LEM NPLG+
Sbjct: 138 GSVIPSER-------PNHMMLEMWNPLGI 159

>AL7A1_ARATH (Q9SYG7) Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)|
           (Antiquitin-1)
          Length = 508

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -2

Query: 274 GSMIPLEQHGCRVCFPNHLALEMLNPLGM 188
           GS+IP E+       PNH+ LEM NPLG+
Sbjct: 136 GSVIPSER-------PNHMMLEMWNPLGI 157

>SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sema G)|
          Length = 1093

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +1

Query: 220 DDWGSTLCSRAAQEESSIPPSVLAFGFECITPHHVTRNNCNPSSFSAWDGWGVC 381
           D+ GS LC    +  S   P     G EC+ P     N     +++AW  W  C
Sbjct: 569 DNSGSCLC----RARSCDSPRPRCGGLECLGPSIHIANCSRNGAWTAWSSWAQC 618

>MCEE_MOUSE (Q9D1I5) Methylmalonyl-CoA epimerase, mitochondrial precursor (EC|
           5.1.99.1) (DL-methylmalonyl-CoA racemase)
          Length = 178

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = -2

Query: 277 VGSMIPLEQHGCRVCFPN--HLALEMLNPLG 191
           V  ++PL +HG  V F N  +  +E+L+PLG
Sbjct: 75  VSEVVPLPEHGVSVVFVNLGNTKMELLHPLG 105

>MCEE_HUMAN (Q96PE7) Methylmalonyl-CoA epimerase, mitochondrial precursor (EC|
           5.1.99.1) (DL-methylmalonyl-CoA racemase)
          Length = 176

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 277 VGSMIPLEQHGCRVCFPN--HLALEMLNPLG 191
           V   +PL +HG  V F N  +  +E+L+PLG
Sbjct: 73  VSEAVPLPEHGVSVVFVNLGNTKMELLHPLG 103

>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 87   FRAVYVARINRVLKPSSHKYND*NANRELKKSRFMPRGFNISSAR*LGKHTLQPCCS 257
            F  + V + +   KP++   +    + +  K+  +P GFN ++   LGKHT  P  S
Sbjct: 1334 FSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTS 1390

>CUTC_PHOLL (Q7N557) Copper homeostasis protein cutC|
          Length = 248

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 331 FGLHDEE*YT---RNQKQAHWVGSMIPLEQHGCRVCFPNHLALEMLNPLGMKRL 179
           FG+ DEE +    R Q+     G M         +CF  ++AL+ L  LG+KR+
Sbjct: 92  FGVLDEEGHIDLPRMQQLMALSGDMAVTFHRAFDMCFNPYVALDQLTQLGVKRI 145

>CN115_HUMAN (Q9H8Y1) Protein C14orf115|
          Length = 702

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 235 TLCSRAAQEESSIPPSVLAFGFECITPHHVTRNNCNPSSFS 357
           +LCS  + E +S+PP+ L   F+        + +C PSSFS
Sbjct: 136 SLCSEESPEMTSLPPATLEAIFDA-----DVKASCFPSSFS 171

>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III|
          Length = 577

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
 Frame = -2

Query: 283 HWVGSMIPLEQHGCRVCFPNHLALEMLNPLGMKRL-----------FFNSLFAFQSLYLC 137
           +WV  ++PL        F   +AL  L  + +K +           FFNSL    ++  C
Sbjct: 52  YWVAEVVPLAV----TSFIPMIALPFLGIVSIKEVAPKYFADTNIVFFNSLMLSLAVEEC 107

Query: 136 DDGFRTRLMRATYTALNNHVLV--FIVFVSLINL 41
               R  L   TY     H L+  F++  S I+L
Sbjct: 108 QLHKRIALKMLTYVGTRPHWLMAGFMIITSFISL 141


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,624,726
Number of Sequences: 219361
Number of extensions: 1001207
Number of successful extensions: 2258
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)