Clone Name | rbastl50h07 |
---|---|
Clone Library Name | barley_pub |
>ECO1_YEAST (P43605) N-acetyltransferase ECO1 (EC 2.3.1.-) (Establishment of| cohesion protein 1) (Chromosome transmission fidelity protein 7) Length = 281 Score = 30.8 bits (68), Expect = 0.87 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 50 NNNSQLNKKMKCSY-KWT*HNLMIDDKAMHDKMYTLRFAG 166 NN S+ NK +KC + + + I+D+A+H+K +TL+ G Sbjct: 24 NNGSKSNKIVKCDKCEMSYSSTSIEDRAIHEKYHTLQLHG 63
>OPSD_PETMA (Q98980) Rhodopsin| Length = 353 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSVN 180 L+ WS L GM S GPD +++N Sbjct: 172 LVGWSRYLPEGMQCSCGPDYYTLN 195
>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 438 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +2 Query: 32 TTLTHTNNNSQLNKKMKCSYKWT*HNLMIDDKAMHDKMYTL 154 TTL H NNN +N + +T H ++I H K+ T+ Sbjct: 346 TTLPHPNNNETINIRF-----YTSHKVLITKNTKHKKLKTI 381
>IPMK_RAT (Q99NI4) Inositol polyphosphate multikinase (EC 2.7.1.151)| (Inositol 1,3,4,6-tetrakisphosphate 5-kinase) Length = 396 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +1 Query: 259 IRLPGLRVDSPPLPRLLG 312 +R PG DSPP+PRLLG Sbjct: 10 LRPPGSTGDSPPVPRLLG 27
>IPMK_MOUSE (Q7TT16) Inositol polyphosphate multikinase (EC 2.7.1.151)| (Inositol 1,3,4,6-tetrakisphosphate 5-kinase) Length = 396 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +1 Query: 259 IRLPGLRVDSPPLPRLLG 312 +R PG DSPP+PRLLG Sbjct: 10 LRPPGSTGDSPPVPRLLG 27
>OPSD_LAMJA (P22671) Rhodopsin| Length = 353 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSVN 180 L+ WS + GM S GPD +++N Sbjct: 172 LVGWSRYIPEGMQCSCGPDYYTLN 195
>OPSG_ORYLA (P87366) Green-sensitive opsin (Green cone photoreceptor pigment)| (KFH-G) Length = 345 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSV----NGVDCSLQI*ACTFC 138 L+ WS + G+ +S GPD +++ N + + +C FC Sbjct: 173 LVGWSRYIPEGIQVSCGPDYYTLAPGFNNESFVMYMFSCHFC 214
>OPSG4_BRARE (Q9W6A6) Green-sensitive opsin-4 (Green cone photoreceptor pigment| 4) (Opsin-1, medium-wave-sensitive 4) (Opsin RH2-4) Length = 349 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSVN 180 L+ WS + GM S GPD +++N Sbjct: 172 LVGWSRYIPEGMQCSCGPDYYTLN 195
>OPSG3_BRARE (Q8AYM7) Green-sensitive opsin-3 (Green cone photoreceptor pigment| 3) (Opsin-1, medium-wave-sensitive 3) (Opsin RH2-3) Length = 349 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSVN 180 L+ WS + GM S GPD +++N Sbjct: 172 LVGWSRYIPEGMQCSCGPDYYTLN 195
>SPORA_IPOBA (P10917) Sporamin A precursor| Length = 219 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 233 LLKAGMDISFGPDQFSVNGVDCSLQI*ACTFC 138 LLKAG +S +QF + VD +L T+C Sbjct: 149 LLKAGEFVSDNSNQFKIEVVDANLNFYKLTYC 180
>OP1S2_BRARE (Q9W6A8) Opsin-1, short-wave-sensitive 2 (Blue-sensitive opsin)| (Blue cone photoreceptor pigment) (Opsin SWS-2) Length = 354 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSVNGV--DCSLQI*ACTFCHALPY 123 L+ WS + G+ S GPD ++ N + S + FC A+P+ Sbjct: 179 LLGWSRYIPEGLQCSCGPDWYTTNNKFNNESYVMFLFCFCFAVPF 223
>DIAP3_MOUSE (Q9Z207) Protein diaphanous homolog 3 (Diaphanous-related formin-3)| (DRF3) (mDIA2) (p134mDIA2) Length = 1171 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +1 Query: 178 PFTEN*SGPKL-MSIPAFSSSLHHISSTIRLPGLRVDSPPLPRL 306 P+ PKL ++I + + ++IR+PG + + PPLP L Sbjct: 29 PYEPGEKRPKLHLNIRTLTDDMLDKFASIRIPGSKKERPPLPHL 72
>OPSB_ANOCA (P51471) Blue-sensitive opsin (Blue photoreceptor pigment) (RH2| opsin) Length = 355 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSVN 180 L+ WS + GM S GPD +++N Sbjct: 172 LLGWSRYIPEGMQCSCGPDYYTLN 195
>NHX4_ARATH (Q8S397) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exchanger 4)| (NHE-4) Length = 529 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/27 (33%), Positives = 18/27 (66%) Frame = -1 Query: 254 LLIWWSELLKAGMDISFGPDQFSVNGV 174 ++IWW+ L++ + I+ QF+ +GV Sbjct: 383 VIIWWAGLMRGAVSIALAFKQFTYSGV 409
>OPSG2_BRARE (Q8AYM8) Green-sensitive opsin-2 (Green cone photoreceptor pigment| 2) (Opsin-1, medium-wave-sensitive 2) (Opsin RH2-2) Length = 349 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSV----NGVDCSLQI*ACTFC 138 L WS + GM S GPD +++ N L + +C FC Sbjct: 172 LFGWSRYIPEGMQTSCGPDYYTLNPEFNNESYVLYMFSCHFC 213
>OPSG1_BRARE (Q9W6A5) Green-sensitive opsin-1 (Green cone photoreceptor pigment| 1) (Opsin-1, medium-wave-sensitive 1) (Opsin RH2-1) Length = 349 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -1 Query: 251 LIWWSELLKAGMDISFGPDQFSVN 180 L WS L GM S GPD +++N Sbjct: 172 LFGWSRYLPEGMQTSCGPDYYTLN 195
>HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin)| Length = 3133 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 257 PSGSPVSESTALRFLDCWDL 316 PSG +SES+AL F D W L Sbjct: 394 PSGGGMSESSALIFADSWKL 413 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,349,470 Number of Sequences: 219361 Number of extensions: 856400 Number of successful extensions: 1959 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1924 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1959 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)