ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl50h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 696 bits (351), Expect = 0.0 Identities = 402/419 (95%) Strand = Plus / Minus Query: 1 actgaaaaggagatatatataaagagttggcttacactcgccacaagctacatcagagcc 60 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 11096 actgaaaagaagagatatataaagagttggcttacactcgccacaagctacatcagagtc 11037 Query: 61 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11036 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 10977 Query: 121 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 180 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 10976 aacgacaaaagaagaacgacgtccatccttgctatccgagggtgccggcctggaacccat 10917 Query: 181 cctagatcgatgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgt 240 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10916 cctagatcgatgaagaagaagaagaagaagcaactccaaatgaacaatcaacgcgctcac 10857 Query: 241 gtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagggg 300 || | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10856 gtgaagtaccatttacctgtacctgcaactggtgttgtagtaatctgtgagccacagggg 10797 Query: 301 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatgg 360 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10796 actcaacaatctcatttccaaaggtatcaagactagcaaagctcaatgggtgaggcatgg 10737 Query: 361 ttaagtggtgaagttgcagcagcggctaagcttatatttggtggctaacttacgagtac 419 ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10736 ttaagtggtgaggttgcagcagcggctaagcatatatttggtggctaacttacgagtac 10678
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 690 bits (348), Expect = 0.0 Identities = 403/420 (95%), Gaps = 1/420 (0%) Strand = Plus / Plus Query: 1 actgaaaaggagatatatataaagagttggcttacactcgccacaagctacatcagagcc 60 ||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 102755 actgaaaagatgagatatatcaagagttggcttacactcgccacaagctacatcagagtc 102814 Query: 61 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102815 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 102874 Query: 121 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102875 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 102934 Query: 181 cctagatcgatgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgt 240 |||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||| Sbjct: 102935 cctagatcgatgatgatgaagaagaagaagcaacttcaaatgaacaatcaacgcgctcac 102994 Query: 241 gtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagggg 300 |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 102995 gtcaaataacctttacctgtacctgcaactggtgttgtagtaatcggtgagccacagggg 103054 Query: 301 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103055 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatgg 103114 Query: 361 ttaagtggtgaagttgcagcagcggctaagcttatatttggtggct-aacttacgagtac 419 ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 103115 ttaagtggtgaggttgcagcagcggctaagcatatatttggtggctaaacttacgagtac 103174
>emb|Z17327.1|HVBARE1 H.vulgare DNA for BARE-1 copia-like retroelement Length = 13271 Score = 678 bits (342), Expect = 0.0 Identities = 393/410 (95%) Strand = Plus / Minus Query: 10 gagatatatataaagagttggcttacactcgccacaagctacatcagagccacatcagta 69 |||||||||||| || |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 10568 gagatatatatattgaattggcttacactcgccacaagctacatcagagtcacatcaata 10509 Query: 70 cattacataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 129 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10508 cattacataaacatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 10449 Query: 130 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10448 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 10389 Query: 190 atgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtag 249 |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| || Sbjct: 10388 atgaagaagaagaagaagaagcaactccaaatgaacaatcaatgcgctcgtgtcaaataa 10329 Query: 250 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 309 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10328 cctttacatgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 10269 Query: 310 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggt 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10268 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaggtggt 10209 Query: 370 gaagttgcagcagcggctaagcttatatttggtggctaacttacgagtac 419 || ||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 10208 gaggttgcagcagcggctaagcatatatttggtggctagcttacgagtac 10159
>dbj|AB014756.1| Hordeum vulgare insertion sequence in a copia-like retroelement BARE-1, gypsy-type retrotransposon BARE-100 DNA, solo-LTR sequence Length = 3130 Score = 678 bits (342), Expect = 0.0 Identities = 393/410 (95%) Strand = Plus / Minus Query: 10 gagatatatataaagagttggcttacactcgccacaagctacatcagagccacatcagta 69 |||||||||||| || |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 3011 gagatatatatattgaattggcttacactcgccacaagctacatcagagtcacatcaata 2952 Query: 70 cattacataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 129 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2951 cattacataaacatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 2892 Query: 130 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2891 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 2832 Query: 190 atgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtag 249 |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| || Sbjct: 2831 atgaagaagaagaagaagaagcaactccaaatgaacaatcaatgcgctcgtgtcaaataa 2772 Query: 250 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 309 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2771 cctttacatgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 2712 Query: 310 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggt 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2711 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaggtggt 2652 Query: 370 gaagttgcagcagcggctaagcttatatttggtggctaacttacgagtac 419 || ||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 2651 gaggttgcagcagcggctaagcatatatttggtggctagcttacgagtac 2602
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 666 bits (336), Expect = 0.0 Identities = 401/422 (95%), Gaps = 3/422 (0%) Strand = Plus / Plus Query: 1 actgaaaaggagatatatataaagagttggcttacactcgccacaagctacatcagagcc 60 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 64823 actgaaaagaagagatatataaagagttggcttacactcgccacaagctacatcagagtc 64882 Query: 61 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 64883 acatcagtacattacataatcatcaagagtaagagcagggtccgtctacggacgaaaaca 64942 Query: 121 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64943 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 65002 Query: 181 cctagatcgat---gatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgct 237 ||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 65003 cctagatcgatgaagaagaagaagaagaagaagcaactccaaatgaacaatcaacacgct 65062 Query: 238 cgtgtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacag 297 || ||| ||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 65063 cgcatcaagtaatcttagcctgtacctgcaactggtgttgtagtaatctgtgagccacag 65122 Query: 298 gggactcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggca 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 65123 gggactcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggta 65182 Query: 358 tggttaagtggtgaagttgcagcagcggctaagcttatatttggtggctaacttacgagt 417 ||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 65183 tggttaaatggtgaggttgcagcagcggctaagcatatatttggtggctaacttacgagt 65242 Query: 418 ac 419 || Sbjct: 65243 ac 65244
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 662 bits (334), Expect = 0.0 Identities = 401/422 (95%), Gaps = 1/422 (0%) Strand = Plus / Plus Query: 1 actgaaaaggagatatatataaagagttggcttacactcgccacaagctacatcagagcc 60 ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 16353 actgaaaagaggagatatataaagagttggcttacactcgccaaaagctacatcagagtc 16412 Query: 61 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 120 | |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| Sbjct: 16413 gcttcagtacattacataaacatgaagagtaagagcagggtccgactacagacgaaaaca 16472 Query: 121 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16473 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 16532 Query: 181 cctagatcgatgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgt 240 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 16533 cctagatcgatgaagaagaagaagaagaagcaactccaaatgaacaatcaacgcgctcgc 16592 Query: 241 gtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagggg 300 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16593 gtcaagtaacctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagggg 16652 Query: 301 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatgg 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 16653 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggtatgg 16712 Query: 361 ttaagtggtgaagttgcagcagcggctaagcttatatttggtggct-aacttacgagtac 419 ||||||||||| ||||||||||||||||||| | ||||||| |||| ||||||||||||| Sbjct: 16713 ttaagtggtgaggttgcagcagcggctaagcatttatttggaggctaaacttacgagtac 16772 Query: 420 ca 421 || Sbjct: 16773 ca 16774
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 656 bits (331), Expect = 0.0 Identities = 399/421 (94%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 1 actgaaaaggagatatatataaagagttggcttacactcgccacaagctacatcagagcc 60 ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 68127 actgaaaagatgagatatataaagagttggcttacactcgccacaggctacatcagagtc 68186 Query: 61 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 120 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68187 acataagttcattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 68246 Query: 121 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68247 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 68306 Query: 181 cctagatcgatgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgt 240 ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 68307 cctagatcgatga---agaagaagaagaagcaactccaaatgaacaatcaaagcgctcgc 68363 Query: 241 gtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagggg 300 |||| ||| || |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68364 gtcaagtaaccattacgtgtacctgcaactggtgttgtagtaatctgtgagccacagggg 68423 Query: 301 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatgg 360 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 68424 actcagcaatctcatttccaaaggtatcaagactagcaaagctttatgggtgaggtatgg 68483 Query: 361 ttaagtggtgaagttgcagcagcggctaagcttatatttggtggctaacttacgagtacc 420 ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 68484 ttaagtggtgaggttgcagcagcgactaagcatatatttggtggctaacttacgagtacc 68543 Query: 421 a 421 | Sbjct: 68544 a 68544
>gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long terminal repeat, partial and complete sequences Length = 11820 Score = 652 bits (329), Expect = 0.0 Identities = 404/423 (95%), Gaps = 7/423 (1%) Strand = Plus / Minus Query: 1 actgaaaaggagatatatata-aagagttggcttacactcgccacaagctacatcagagc 59 ||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 11756 actgaaaagaagagatatatagaagagttggcttacactcgccacaagttacatcagagt 11697 Query: 60 cacatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaac 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11696 cacatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaac 11637 Query: 120 aaacgacaaaag-aagaacgacgtccatccttgctatcccaggctgccggcctggaaccc 178 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11636 aaacgagaaaaataagaacgacgtccatccttgctatcccaggctgccggcctggaaccc 11577 Query: 179 atcctagatcgatgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctc 238 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11576 atcctagatcgatga---agaagaagaagaagcaactccaaatgaacaatcaacgcgctc 11520 Query: 239 gtgtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagg 298 | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11519 gcgtcaagtaacctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagg 11460 Query: 299 gg-actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggca 357 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11459 gggactcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggca 11400 Query: 358 tggttaagtggtgaagttgcagcagcggctaagcttatatttggtggct-aacttacgag 416 |||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 11399 tggttaagtggtgaggttgcagcagcggctaagcatatatttggtggctaaacttacgag 11340 Query: 417 tac 419 ||| Sbjct: 11339 tac 11337 Score = 648 bits (327), Expect = 0.0 Identities = 381/399 (95%) Strand = Plus / Minus Query: 10 gagatatatataaagagttggcttacactcgccacaagctacatcagagccacatcagta 69 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4208 gagatatatatacagagttggcttacactcgccacaagctacatcagagtcacatcagta 4149 Query: 70 cattacataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 129 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4148 cattacatcatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 4089 Query: 130 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 189 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4088 agaagaacgacatccatccttgctatcccaggctgccggcctggaacccatcctagatcg 4029 Query: 190 atgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtag 249 |||| |||||||||||||| ||||||||||| |||||| ||||||||||| |||| ||| Sbjct: 4028 atgaagaagaagaagaagaggcaactccaaaagaacaatcaacgcgctcgcgtcaagtaa 3969 Query: 250 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 309 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3968 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccataggggactcagcaa 3909 Query: 310 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggt 369 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || Sbjct: 3908 tctcatttccaaaggtatcaagactagcaaagcttaatgggtaaggtatggttaagtcgt 3849 Query: 370 gaagttgcagcagcggctaagcttatatttggtggctaa 408 || ||||||||||||||||||| |||| ||||||||||| Sbjct: 3848 gaggttgcagcagcggctaagcatatagttggtggctaa 3810
>gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotransposon long terminal repeat, complete sequence Length = 7575 Score = 648 bits (327), Expect = 0.0 Identities = 381/399 (95%) Strand = Plus / Minus Query: 10 gagatatatataaagagttggcttacactcgccacaagctacatcagagccacatcagta 69 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4208 gagatatatatacagagttggcttacactcgccacaagctacatcagagtcacatcagta 4149 Query: 70 cattacataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 129 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4148 cattacatcatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 4089 Query: 130 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 189 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4088 agaagaacgacatccatccttgctatcccaggctgccggcctggaacccatcctagatcg 4029 Query: 190 atgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtag 249 |||| |||||||||||||| ||||||||||| |||||| ||||||||||| |||| ||| Sbjct: 4028 atgaagaagaagaagaagaggcaactccaaaagaacaatcaacgcgctcgcgtcaagtaa 3969 Query: 250 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 309 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3968 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccataggggactcagcaa 3909 Query: 310 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggt 369 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || Sbjct: 3908 tctcatttccaaaggtatcaagactagcaaagcttaatgggtaaggtatggttaagtcgt 3849 Query: 370 gaagttgcagcagcggctaagcttatatttggtggctaa 408 || ||||||||||||||||||| |||| ||||||||||| Sbjct: 3848 gaggttgcagcagcggctaagcatatagttggtggctaa 3810
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 646 bits (326), Expect = 0.0 Identities = 377/394 (95%) Strand = Plus / Minus Query: 15 atatataaagagttggcttacactcgccacaagctacatcagagccacatcagtacatta 74 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 327169 atatatatagagttggcttacactcgccacaagctacatcagagtcacatcagtacatta 327110 Query: 75 cataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaaagaag 134 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 327109 cataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgagaaaagaag 327050 Query: 135 aacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcgatgat 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327049 aacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcgatgat 326990 Query: 195 gaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtagccttt 254 ||||||| ||||||||||||||||||||||||| |||| |||||| ||| ||| ||||| Sbjct: 326989 gaagaaggagaagaagcaactccaaatgaacaatcaacacgctcgcatcaagtaaccttt 326930 Query: 255 acctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctca 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326929 acctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctca 326870 Query: 315 tttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtgaagt 374 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || Sbjct: 326869 tttccaaaggtatcaagactagcaaagcttaatgggtaaggtatggttaagtggtgaggt 326810 Query: 375 tgcagcagcggctaagcttatatttggtggctaa 408 || |||||||||||||| | |||||||| ||||| Sbjct: 326809 tgtagcagcggctaagcatttatttggtcgctaa 326776 Score = 603 bits (304), Expect = e-169 Identities = 383/408 (93%), Gaps = 6/408 (1%) Strand = Plus / Minus Query: 1 actgaaaaggagatatatataaagagttggcttacactcgccacaagctacatcagagcc 60 ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 131580 actgaaaagaagagatatatatagagttggcttacactcgccacaagctacatcagagtc 131521 Query: 61 acatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaaca 120 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 131520 acatcagtacattacat---catcaagagtaagagcagggtccgactacggaagaaaaca 131464 Query: 121 aacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacccat 180 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131463 aacgagaaaagaagaacgacgtccatccttgctatcccaggctgccgccctggaacccat 131404 Query: 181 cctagatcgatgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgt 240 ||||||||||||| || |||||||||||||||||||||||||||| |||||||||| Sbjct: 131403 cctagatcgatga---aggagaagaagaagcaactccaaatgaacaatcaacgcgctcac 131347 Query: 241 gtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacagggg 300 |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131346 gtcaagtgacctttacatgtacctgcaactggtgttgtagtaatctgtgagccacaggtg 131287 Query: 301 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131286 actcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatgg 131227 Query: 361 ttaagtggtgaagttgcagcagcggctaagcttatatttggtggctaa 408 ||||||||||| ||||||||||||||||||| || ||||||||||||| Sbjct: 131226 ttaagtggtgaggttgcagcagcggctaagcataaatttggtggctaa 131179 Score = 204 bits (103), Expect = 2e-49 Identities = 118/123 (95%) Strand = Plus / Minus Query: 286 tgtgagccacaggggactcagcaatctcatttccaaaggtatcaagactagcaaagctta 345 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 178659 tgtgagccacaggggactcagcaatctcatttcgaaaggtatcaagactagcaaagctta 178600 Query: 346 atgggtgaggcatggttaagtggtgaagttgcagcagcggctaagcttatatttggtggc 405 ||||||||||||| |||||||||||| ||||||||||||||||||| || |||||||||| Sbjct: 178599 atgggtgaggcatagttaagtggtgaggttgcagcagcggctaagcataaatttggtggc 178540 Query: 406 taa 408 ||| Sbjct: 178539 taa 178537 Score = 52.0 bits (26), Expect = 0.001 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 279 agtaatctgtgagccacaggggactcagcaatct 312 ||||||||||||||||| |||||||||||||||| Sbjct: 182074 agtaatctgtgagccac-ggggactcagcaatct 182106 Score = 52.0 bits (26), Expect = 0.001 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 279 agtaatctgtgagccacaggggactcagcaatct 312 ||||||||||||||||| |||||||||||||||| Sbjct: 159014 agtaatctgtgagccac-ggggactcagcaatct 159046 Score = 46.1 bits (23), Expect = 0.092 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 282 aatctgtgagccacaggggactcagcaatct 312 |||||||||||||| |||||||||||||||| Sbjct: 162280 aatctgtgagccac-ggggactcagcaatct 162309 Score = 46.1 bits (23), Expect = 0.092 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 282 aatctgtgagccacaggggactcagcaatct 312 |||||||||||||| |||||||||||||||| Sbjct: 114503 aatctgtgagccac-ggggactcagcaatct 114532
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 634 bits (320), Expect = e-179 Identities = 390/412 (94%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 10 gagatatatataaagagttggcttacactcgccacaagctacatcagagccacatcagta 69 |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 37272 gagatatatatacagagttggcttacactcaccacaagctacatcagagtcacatcagta 37331 Query: 70 cattacataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 129 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 37332 cattacataatcatcaagagtaagagcggggtccgactacggacgaaaacaaacgagaaa 37391 Query: 130 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 189 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37392 atga-aacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 37450 Query: 190 atgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtag 249 |||| ||| ||| |||||||||||||| |||||||||| || |||||||| |||| ||| Sbjct: 37451 atgaagaaaaaggagaagaagcaactcaaaatgaacaatcagcgcgctcgcgtcaagtaa 37510 Query: 250 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37511 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 37570 Query: 310 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggt 369 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 37571 tctcatttccaaaggtatcaagactggcaaagcttaatgggtgaggaatggttaagtggt 37630 Query: 370 gaagttgcagcagcggctaagcttatatttggtggctaacttacgagtacca 421 || |||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 37631 gaggttgcagcagcgactaagcatatatttggtggctaacttacgagtacca 37682
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 630 bits (318), Expect = e-178 Identities = 401/425 (94%), Gaps = 4/425 (0%) Strand = Plus / Plus Query: 1 actgaaaaggagatatatataaagag--ttggcttacactcgccacaagctacatcagag 58 ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3290 actgaaaaggagagatatataaagagggttggcttacactcgccacaagctacatcagag 3349 Query: 59 ccacatcagtacattacataatcatcaagagtaagagcagggtccgactacggacgaaaa 118 ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 3350 tcacctcagtacattacataatcatcaagagtaagagcagggtccgactatggatgaaaa 3409 Query: 119 -caaacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacc 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3410 acaaacgacaaaagaagaacgacgtccatccttgctatcccaggctgccggcctggaacc 3469 Query: 178 catcctagatcgatgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgct 237 ||||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 3470 catcctagatcgaagaagaagaagaagaagaagcaactccagatgaacaatcaacgcgct 3529 Query: 238 cgtgtcacgtagcctttacctgtacctgcaactggtgttgtagtaatctgtgagccacag 297 | ||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3530 cacgtcgaataacctttacctgtacctgcaactggtgttgtagtaatctgtgagccacag 3589 Query: 298 gggactcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggca 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3590 gggactcagcaatctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggca 3649 Query: 358 tggttaagtggtgaagttgcagcagcggctaagcttatatttggtggct-aacttacgag 416 |||||||||||||| ||||||||||| |||||| ||||| |||||||| |||||||||| Sbjct: 3650 tggttaagtggtgagattgcagcagcgactaagcatatatctggtggctaaacttacgag 3709 Query: 417 tacca 421 ||||| Sbjct: 3710 tacca 3714
>gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposon, partial sequence Length = 7674 Score = 611 bits (308), Expect = e-172 Identities = 376/399 (94%), Gaps = 6/399 (1%) Strand = Plus / Minus Query: 10 gagatatatataaagagttggcttacactcgccacaagctacatcagagccacatcagta 69 |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4202 gagatatatataaagaattggcttacactcgccacaagctacatcagagtcacatcagta 4143 Query: 70 cattacataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgacaaa 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4142 cattacataatcatcaagagtaagagcagggtccgactacggacgaaaacaaacgagaaa 4083 Query: 130 agaagaacgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4082 a------cgacgtccatccttgctatcccaggctgccggcctggaacccatcctagatcg 4029 Query: 190 atgatgaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtag 249 |||| |||||||||||||| ||||||||||| |||||| ||||||||||| |||| ||| Sbjct: 4028 atgaagaagaagaagaagaggcaactccaaaagaacaatcaacgcgctcgcgtcaagtaa 3969 Query: 250 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaa 309 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3968 cctttacctgtacctgcaactggtgttgtagtaatctgtgagccataggggactcagcaa 3909 Query: 310 tctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggt 369 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || Sbjct: 3908 tctcatttccaaaggtatcaagactagcaaagcttaatgggtaaggtatggttaagtcgt 3849 Query: 370 gaagttgcagcagcggctaagcttatatttggtggctaa 408 || ||||||||||||||||||| |||| ||||||||||| Sbjct: 3848 gaggttgcagcagcggctaagcatatagttggtggctaa 3810
>gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg1 region, genomic sequence Length = 3124 Score = 365 bits (184), Expect = 8e-98 Identities = 351/399 (87%), Gaps = 12/399 (3%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatcagagccacatcagtacattacata--atcatc 84 |||||||||| ||||||||||||||||||||| |||||| ||||||||||| ||| | Sbjct: 2402 ttggcttacaatcgccacaagctacatcagagtcacatcgatacattacatacaatcgcc 2343 Query: 85 aagagtaagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtcc 144 | || |||||||||||||||||||| |||||||||||||| ||||||| |||||||| Sbjct: 2342 atgaagaagagcagggtccgactacgaacgaaaacaaacgataaaagaa---cgacgtcc 2286 Query: 145 atccttgctatcccaggctgccggcctggaacccatcctagatcgatgatgaagaagaag 204 ||||||||||||||||||||||| |||||||||||||||||||||| || |||||| || Sbjct: 2285 atccttgctatcccaggctgccgacctggaacccatcctagatcgacgaagaagaa--ag 2228 Query: 205 aagaagcaactccaaatgaacaaacaacgcg--ctcgtgtcacgtagcctttacctgtac 262 |||||| |||||||||||||||| || |||| | ||| | | || ||||||| ||||| Sbjct: 2227 aagaagaaactccaaatgaacaatcatcgcgtgcacgtcttaa-tatcctttacatgtac 2169 Query: 263 ctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctcatttccaaa 322 ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2168 ctgcaactgatgttatagtaatctgtgagccacaggggactcggcaatctcatttccaaa 2109 Query: 323 ggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtgaagttgcagca- 381 |||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||| Sbjct: 2108 agtatcaagactagcaaagcttaatggatgaggtatggttaagtggtgaggctgcagcaa 2049 Query: 382 gcggctaagctt-atatttggtggctaacttacgagtac 419 ||| |||||| | || | |||||||||||||||||||| Sbjct: 2048 gcgactaagcatcatttgaggtggctaacttacgagtac 2010
>gb|AY187024.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT4 gene, complete cds Length = 6561 Score = 329 bits (166), Expect = 4e-87 Identities = 212/226 (93%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 195 gaagaagaagaagaagcaactccaaatgaacaaacaacgcgctcgtgtcacgtagccttt 254 ||||||||||||||||||||||||||| ||||| | ||||||||| |||| ||| ||||| Sbjct: 2746 gaagaagaagaagaagcaactccaaataaacaatccacgcgctcgcgtcaagtaaccttt 2805 Query: 255 acctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctca 314 || ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2806 acatgtacttgcaactggtgttgtagtaatctgtgagccataggggactcagcaatctca 2865 Query: 315 tttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtgaagt 374 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2866 tttccaaagatatcaagactagcaaagcttaatgggtgaggcatggttaagtggtgaggt 2925 Query: 375 tgcagcagcggctaagcttatatttggtggct-aacttacgagtac 419 ||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 2926 tgcagcagcggctaagcacatatttggtggctaaacttacgagtac 2971 Score = 305 bits (154), Expect = 6e-80 Identities = 175/182 (96%) Strand = Plus / Plus Query: 29 ggcttacactcgccacaagctacatcagagccacatcagtacattacataatcatcaaga 88 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2553 ggcttacactcgccacaagctacatcagagtcacatcagtacattacataatcatcaagg 2612 Query: 89 gtaagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcc 148 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 2613 gtaagagcagggtccgactacggacgaaaacaaccgagaaaagaagaacgacgtccatcc 2672 Query: 149 ttgctatcccaggctgccggcctggaacccatcctagatcgatgatgaagaagaagaaga 208 |||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct: 2673 ttgctatcccaggctgccggtctggaacccatcctagattgatgaagaagaagaagaaga 2732 Query: 209 ag 210 || Sbjct: 2733 ag 2734
>gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7731 Score = 182 bits (92), Expect = 6e-43 Identities = 151/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 253 ttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatct 312 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 4078 ttacctgtacctgcaactggtgttgtaggaatctgtgagccac-ggggactcagcaatct 4020 Query: 313 catttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtgaa 372 ||||||||| ||||||||||||| |||||||||| || ||| ||||||||||||||| Sbjct: 4019 catttccaagggtatcaagactattaaagcttaataggcaaggtatggttaagtggtgag 3960 Query: 373 gttgcagcagcggctaagcttatatttg-gtggctaacttacgagtac 419 ||||||||| |||||| | |||||| ||||||||||||||||||| Sbjct: 3959 gttgcagcaagcactaagcatttatttgagtggctaacttacgagtac 3912 Score = 121 bits (61), Expect = 2e-24 Identities = 103/116 (88%), Gaps = 7/116 (6%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 4230 aagagcagggtccgactacggacgaaaacaaacgataaaat------gacatccatcctt 4177 Query: 151 gctatcccaggctgccggcctggaacccatcctagatcgatgatgaagaagaagaa 206 ||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 4176 gctatcccaggctgccg-cctggaacccatcctatatcgaagaagaagaagaagaa 4122 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatcagagccacatcagtaca 71 |||||||||||||||||||||||||| || | |||||||| |||| Sbjct: 4299 ttggcttacactcgccacaagctacaacaaaaccacatcaataca 4255
>gb|AY054378.1| Hordeum vulgare clone HmaLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7919 Score = 153 bits (77), Expect = 5e-34 Identities = 146/165 (88%), Gaps = 3/165 (1%) Strand = Plus / Minus Query: 253 ttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatct 312 |||||||||||| |||||| |||| ||||||| |||||||||| ||||||||| |||||| Sbjct: 4187 ttacctgtacctccaactgttgttatagtaatttgtgagccac-ggggactcaacaatct 4129 Query: 313 catttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtgaa 372 ||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||| Sbjct: 4128 catttccaagggtatcaagactattaaagcttaatgggtgaggtacggttaagtggtgag 4069 Query: 373 gttgcagc-agcggctaagcttatatttg-gtggctaacttacga 415 | |||||| |||| |||||| | |||||| |||| |||||||||| Sbjct: 4068 gctgcagcaagcgactaagcatttatttgagtggttaacttacga 4024 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/120 (85%), Gaps = 7/120 (5%) Strand = Plus / Minus Query: 90 taagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcct 149 |||||||||||||||||||||||||||| ||||| | |||| ||| |||||||| Sbjct: 4343 taagagcagggtccgactacggacgaaatcaaacaataaaat------gacatccatcct 4290 Query: 150 tgctatcccaggctgccggcctggaacccatcctagatcgatgatgaagaagaagaagaa 209 |||||||| |||||||| |||| ||| |||||||| || ||||| ||||||||||||||| Sbjct: 4289 tgctatcctaggctgcc-gcctagaatccatcctaaattgatgaagaagaagaagaagaa 4231 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 18 tataaagagttggcttacactcgccacaagctacatcagagccacatcagtaca 71 |||| ||| |||||||||||||| ||||||||||||||||| ||||||| |||| Sbjct: 4419 tatatagaattggcttacactcgtcacaagctacatcagagtcacatcaataca 4366
>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7586 Score = 149 bits (75), Expect = 9e-33 Identities = 109/119 (91%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 253 ttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatct 312 |||||||||||||||||| |||||||| |||||||||||||| ||||||||| |||||| Sbjct: 3876 ttacctgtacctgcaactattgttgtaggaatctgtgagccac-ggggactcaacaatct 3818 Query: 313 catttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtga 371 ||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||| Sbjct: 3817 catttccaagggtatcaagactattaaagcttaatgggtgaggtaaggttaagtggtga 3759 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/119 (85%), Gaps = 7/119 (5%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 |||||||||||| ||||||||||||||||||||| |||| ||| |||||||| Sbjct: 4031 aagagcagggtctaactacggacgaaaacaaacgataaaat------gacacccatcctt 3978 Query: 151 gctatcccaggctgccggcctggaacccatcctagatcgatgatgaagaagaagaagaa 209 ||||||||||||||||| ||||||||||||||| |||| | || ||||||||||||||| Sbjct: 3977 gctatcccaggctgccg-cctggaacccatcctggatcaaagaagaagaagaagaagaa 3920 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctaca 52 |||||||||||||||||||||||||| Sbjct: 4100 ttggcttacactcgccacaagctaca 4075
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 129 bits (65), Expect = 8e-27 Identities = 144/169 (85%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 251 ctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaat 310 ||||||||||||||||| ||| |||||||||||||||||||||| |||||| || |||| Sbjct: 11142 ctttacctgtacctgcacctgttgttgtagtaatctgtgagcca-tggggacccaacaat 11200 Query: 311 ctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtg 370 |||||| |||| |||| ||| |||||||||||||||||||| || | |||||||||||| Sbjct: 11201 ctcattaccaagggtagcaaaactagcaaagcttaatgggtatggaagggttaagtggtg 11260 Query: 371 aagttgcagcagcggctaagcttatatttggtggctaacttacgagtac 419 | | || ||| ||||||| | | | ||||||||||||||||||||| Sbjct: 11261 aggaggctgcaagcgctaagcatttgtatggtggctaacttacgagtac 11309 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 170 ctggaacccatccta-gatcgatgatgaagaagaagaagaa 209 ||||||||||||||| |||||| || |||| |||||||||| Sbjct: 11061 ctggaacccatcctatgatcgacgaagaagcagaagaagaa 11101
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 129 bits (65), Expect = 8e-27 Identities = 144/169 (85%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 251 ctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaat 310 ||||||||||||||||| ||| |||||||||||||||||||||| |||||| || |||| Sbjct: 10606 ctttacctgtacctgcacctgttgttgtagtaatctgtgagcca-tggggacccaacaat 10664 Query: 311 ctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtg 370 |||||| |||| |||| ||| |||||||||||||||||||| || | |||||||||||| Sbjct: 10665 ctcattaccaagggtagcaaaactagcaaagcttaatgggtatggaagggttaagtggtg 10724 Query: 371 aagttgcagcagcggctaagcttatatttggtggctaacttacgagtac 419 | | || ||| ||||||| | | | ||||||||||||||||||||| Sbjct: 10725 aggaggctgcaagcgctaagcatttgtatggtggctaacttacgagtac 10773 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 170 ctggaacccatccta-gatcgatgatgaagaagaagaagaa 209 ||||||||||||||| |||||| || |||| |||||||||| Sbjct: 10525 ctggaacccatcctatgatcgacgaagaagcagaagaagaa 10565
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 129 bits (65), Expect = 8e-27 Identities = 144/169 (85%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 251 ctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaat 310 ||||||||||||||||| ||| |||||||||||||||||||||| |||||| || |||| Sbjct: 11127 ctttacctgtacctgcacctgttgttgtagtaatctgtgagcca-tggggacccaacaat 11185 Query: 311 ctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtg 370 |||||| |||| |||| ||| |||||||||||||||||||| || | |||||||||||| Sbjct: 11186 ctcattaccaagggtagcaaaactagcaaagcttaatgggtatggaagggttaagtggtg 11245 Query: 371 aagttgcagcagcggctaagcttatatttggtggctaacttacgagtac 419 | | || ||| ||||||| | | | ||||||||||||||||||||| Sbjct: 11246 aggaggctgcaagcgctaagcatttgtatggtggctaacttacgagtac 11294 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 170 ctggaacccatccta-gatcgatgatgaagaagaagaagaa 209 ||||||||||||||| |||||| || |||| |||||||||| Sbjct: 11046 ctggaacccatcctatgatcgacgaagaagcagaagaagaa 11086
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 129 bits (65), Expect = 8e-27 Identities = 144/169 (85%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 251 ctttacctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaat 310 ||||||||||||||||| ||| |||||||||||||||||||||| |||||| || |||| Sbjct: 77678 ctttacctgtacctgcacctgttgttgtagtaatctgtgagcca-tggggacccaacaat 77736 Query: 311 ctcatttccaaaggtatcaagactagcaaagcttaatgggtgaggcatggttaagtggtg 370 |||||| |||| |||| ||| |||||||||||||||||||| || | |||||||||||| Sbjct: 77737 ctcattaccaagggtagcaaaactagcaaagcttaatgggtatggaagggttaagtggtg 77796 Query: 371 aagttgcagcagcggctaagcttatatttggtggctaacttacgagtac 419 | | || ||| ||||||| | | | ||||||||||||||||||||| Sbjct: 77797 aggaggctgcaagcgctaagcatttgtatggtggctaacttacgagtac 77845 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 278 tagtaatctgtgagccacaggggactcagcaatctc 313 ||||||||||||||||||| ||||||||||||||| Sbjct: 114726 tagtaatctgtgagccacaaaggactcagcaatctc 114761 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 278 tagtaatctgtgagccacaggggactcagcaatctc 313 ||||||||||||||||||| ||||||||||||||| Sbjct: 104859 tagtaatctgtgagccacaaaggactcagcaatctc 104894 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 170 ctggaacccatccta-gatcgatgatgaagaagaagaagaa 209 ||||||||||||||| |||||| || |||| |||||||||| Sbjct: 77597 ctggaacccatcctatgatcgacgaagaagcagaagaagaa 77637 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 114471 agttggcttacactcgccac 114490 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 104604 agttggcttacactcgccac 104623
>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete cds; and gypsy retrotransposon Sukkula, complete sequence Length = 6730 Score = 85.7 bits (43), Expect = 1e-13 Identities = 86/99 (86%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 273 tgttgtagtaatctgtgagccacaggggactcagcaatctcatttccaaaggtatcaaga 332 |||||||||||||| ||||||| |||||| ||||||||||||| |||| |||| ||| | Sbjct: 2080 tgttgtagtaatctatgagccat-ggggacccagcaatctcattaccaagggtagcaaaa 2138 Query: 333 ctagcaaagcttaatgggtgaggcatggttaagtggtga 371 ||||||||| ||||||||| || | ||||||||||||| Sbjct: 2139 ctagcaaagattaatgggtatggaagggttaagtggtga 2177 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 tggtggctaacttacgagtac 419 ||||||||||||||||||||| Sbjct: 2205 tggtggctaacttacgagtac 2225 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 170 ctggaacccatccta-gatcgatgatgaagaagaagaagaa 209 ||||||||||||||| |||||| || |||| |||||||||| Sbjct: 1980 ctggaacccatcctatgatcgacgaagaagcagaagaagaa 2020
>gb|AF453670.1| Hordeum roshevitzii isolate Hroshevitzii Sukkula retrotransposon, partial sequence Length = 3434 Score = 79.8 bits (40), Expect = 7e-12 Identities = 66/75 (88%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 ||||||||||||||||||||||||||||||||||| || || ||| ||||||||| Sbjct: 69 aagagcagggtccgactacggacgaaaacaaacgataa------aatgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 ||||||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctacatca 110
>gb|AF453663.1| Hordeum patagonicum isolate HPA2 Sukkula retrotransposon, partial sequence Length = 3862 Score = 79.8 bits (40), Expect = 7e-12 Identities = 66/75 (88%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 ||||||||||||||||||| ||||||||||||||| || |||||| ||||||||| Sbjct: 69 aagagcagggtccgactacagacgaaaacaaacgataa------aacgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 |||||||||||||||||||||||| |||| Sbjct: 138 ttggcttacactcgccacaagctaaatca 110
>gb|AF453662.1| Elymus repens isolate Ely3 Sukkula retrotransposon, partial sequence Length = 3622 Score = 79.8 bits (40), Expect = 7e-12 Identities = 66/75 (88%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 ||||||||||||||||||||||||||||||||||| || || ||| ||||||||| Sbjct: 69 aagagcagggtccgactacggacgaaaacaaacgataa------aatgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 ||||||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctacatca 110
>gb|AF453658.1| Elymus repens isolate Ely1 Sukkula retrotransposon, partial sequence Length = 3613 Score = 79.8 bits (40), Expect = 7e-12 Identities = 66/75 (88%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 ||||||||||||||||||||||||||||||||||| || || ||| ||||||||| Sbjct: 69 aagagcagggtccgactacggacgaaaacaaacgataa------aatgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 ||||||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctacatca 110
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 77.8 bits (39), Expect = 3e-11 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 273 tgttgtagtaatctgtgagccacaggggactcagcaatctcatttccaaaggtatcaaga 332 |||||||||||||| ||||||| |||||| ||||||||||||| |||| |||| ||| | Sbjct: 7817 tgttgtagtaatctatgagccat-ggggac-cagcaatctcattaccaagggtagcaaaa 7874 Query: 333 ctagcaaagcttaatgggtgaggcatggttaagtggtga 371 ||||||||| ||||||||| || | ||||||||||||| Sbjct: 7875 ctagcaaagattaatgggtatggaagggttaagtggtga 7913 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 tggtggctaacttacgagtac 419 ||||||||||||||||||||| Sbjct: 7941 tggtggctaacttacgagtac 7961 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 170 ctggaacccatccta-gatcgatgatgaagaagaagaagaa 209 ||||||||||||||| |||||| || |||| |||||||||| Sbjct: 7717 ctggaacccatcctatgatcgacgaagaagcagaagaagaa 7757 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 ttacactcgccacaagctaca 52 ||||||||||||||||||||| Sbjct: 7583 ttacactcgccacaagctaca 7603
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 77.8 bits (39), Expect = 3e-11 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 273 tgttgtagtaatctgtgagccacaggggactcagcaatctcatttccaaaggtatcaaga 332 |||||||||||||| ||||||| |||||| ||||||||||||| |||| |||| ||| | Sbjct: 7586 tgttgtagtaatctatgagccat-ggggac-cagcaatctcattaccaagggtagcaaaa 7643 Query: 333 ctagcaaagcttaatgggtgaggcatggttaagtggtga 371 ||||||||| ||||||||| || | ||||||||||||| Sbjct: 7644 ctagcaaagattaatgggtatggaagggttaagtggtga 7682 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 tggtggctaacttacgagtac 419 ||||||||||||||||||||| Sbjct: 7710 tggtggctaacttacgagtac 7730 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 170 ctggaacccatccta-gatcgatgatgaagaagaagaagaa 209 ||||||||||||||| |||||| || |||| |||||||||| Sbjct: 7486 ctggaacccatcctatgatcgacgaagaagcagaagaagaa 7526 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 ttacactcgccacaagctaca 52 ||||||||||||||||||||| Sbjct: 7352 ttacactcgccacaagctaca 7372
>gb|AF453667.1| Hordeum patagonicum isolate HPA1 Sukkula retrotransposon, partial sequence Length = 3698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 65/75 (86%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 |||||||||||||| |||||||||||||||||||| || ||| || ||||||||| Sbjct: 69 aagagcagggtccggctacggacgaaaacaaacgataa------aacaacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctaca 52 |||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctaca 113
>gb|AF453666.1| Hordeum patagonicum isolate HPA5 Sukkula retrotransposon, partial sequence Length = 3804 Score = 71.9 bits (36), Expect = 2e-09 Identities = 65/75 (86%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 |||||||||||||| |||||||||||||||||||| || ||| || ||||||||| Sbjct: 69 aagagcagggtccggctacggacgaaaacaaacgataa------aacaacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctaca 52 |||||||||||||||||||||||||| Sbjct: 137 ttggcttacactcgccacaagctaca 112
>gb|AF453664.1| Hordeum patagonicum isolate Hpa3 Sukkula retrotransposon, partial sequence Length = 3943 Score = 71.9 bits (36), Expect = 2e-09 Identities = 65/75 (86%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 |||||||||||||| |||||||||||||||||||| || ||| || ||||||||| Sbjct: 69 aagagcagggtccggctacggacgaaaacaaacgataa------aacaacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctaca 52 |||||||||||||||||||||||||| Sbjct: 137 ttggcttacactcgccacaagctaca 112
>gb|AF453660.1| Hordeum euclaston isolate He1 Sukkula retrotransposon, partial sequence Length = 3764 Score = 71.9 bits (36), Expect = 2e-09 Identities = 65/75 (86%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 |||||||||||||||||||||||||||||||| || || || ||| ||||||||| Sbjct: 69 aagagcagggtccgactacggacgaaaacaaatgataa------aatgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 ||||||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctacatca 110
>gb|AF453659.1| Hordeum euclaston isolate He3 Sukkula retrotransposon, partial sequence Length = 3774 Score = 71.9 bits (36), Expect = 2e-09 Identities = 65/75 (86%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 |||||||||||||||||||||||||||||||| || || || ||| ||||||||| Sbjct: 69 aagagcagggtccgactacggacgaaaacaaatgataa------aatgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 ||||||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctacatca 110
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 63.9 bits (32), Expect = 4e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 262 cctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctc 313 |||||| ||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 3191 cctgcatctggtgtaatagtaatctgtgagccaca-gggactcagcaatctc 3241 Score = 56.0 bits (28), Expect = 1e-04 Identities = 54/60 (90%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 255 acctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctca 314 ||||| ||||||| |||| |||||| || ||||||||||||| ||||||||||||||||| Sbjct: 284435 acctggacctgcacctggagttgtaata-tctgtgagccaca-gggactcagcaatctca 284378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 54/60 (90%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 255 acctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctca 314 ||||| ||||||| |||| |||||| || ||||||||||||| ||||||||||||||||| Sbjct: 274921 acctggacctgcacctggagttgtaata-tctgtgagccaca-gggactcagcaatctca 274864 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 284668 agttggcttacactcgccac 284649 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 275154 agttggcttacactcgccac 275135 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 2956 agttggcttacactcgccac 2975
>gb|AY069967.1| Hordeum erectifolium clone hele412 retrotransposon sukkula, complete sequence Length = 3695 Score = 63.9 bits (32), Expect = 4e-07 Identities = 64/75 (85%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 ||||||||||||| |||||||||||||||||||| || || ||| ||||||||| Sbjct: 69 aagagcagggtccatctacggacgaaaacaaacgataa------aatgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 ||||||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctacatca 110
>gb|AY069966.1| Hordeum erectifolium clone hele410 retrotransposon sukkula, complete sequence Length = 3683 Score = 63.9 bits (32), Expect = 4e-07 Identities = 64/75 (85%), Gaps = 6/75 (8%) Strand = Plus / Minus Query: 91 aagagcagggtccgactacggacgaaaacaaacgacaaaagaagaacgacgtccatcctt 150 |||||||||||||||||||||||||||| ||| || || || ||| ||||||||| Sbjct: 69 aagagcagggtccgactacggacgaaaaaaaatgataa------aatgacatccatcctt 16 Query: 151 gctatcccaggctgc 165 ||||||||||||||| Sbjct: 15 gctatcccaggctgc 1 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 27 ttggcttacactcgccacaagctacatca 55 ||||||||||||||||||||||||||||| Sbjct: 138 ttggcttacactcgccacaagctacatca 110
>gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rpg1 region, genomic sequence Length = 7321 Score = 61.9 bits (31), Expect = 2e-06 Identities = 72/83 (86%), Gaps = 2/83 (2%) Strand = Plus / Minus Query: 339 aagcttaatgggtgaggcatggttaagtggtgaagttgcagca-gcggctaagctt-ata 396 ||||||||||| ||||| ||||||||||||||| | ||||||| ||| |||||| | || Sbjct: 7321 aagcttaatggatgaggtatggttaagtggtgaggctgcagcaagcgactaagcatcatt 7262 Query: 397 tttggtggctaacttacgagtac 419 | |||||||||||||||||||| Sbjct: 7261 tgaggtggctaacttacgagtac 7239
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 58.0 bits (29), Expect = 2e-05 Identities = 42/45 (93%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 269 ctggtgttgtagtaatctgtgagccacaggggactcagcaatctc 313 ||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 109952 ctggtgtactagtaatctgtgagccaca-gggactcagcaatctc 109909 Score = 58.0 bits (29), Expect = 2e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 257 ctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctc 313 |||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 48070 ctgtccctgcatctggtgtaatagtaatctgtgagccaca-aggactcagcaatctc 48015 Score = 50.1 bits (25), Expect = 0.006 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 269 ctggtgttgtagtaatctgtgagccacaggggactcagcaatctc 313 ||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 66552 ctggtgtaatagtaatctgtgagccaca-aggactcagcaatctc 66509 Score = 46.1 bits (23), Expect = 0.092 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 283 atctgtgagccacaggggactcagcaatctc 313 |||||||||||||| |||||||||||||||| Sbjct: 151359 atctgtgagccaca-gggactcagcaatctc 151388 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 agttggcttacactcgccaca 45 ||||||||||||||||||||| Sbjct: 66798 agttggcttacactcgccaca 66778 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 110193 agttggcttacactcgccac 110174 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 48304 agttggcttacactcgccac 48285
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 58.0 bits (29), Expect = 2e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 257 ctgtacctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctc 313 |||| |||||| ||||||| ||||||||||||| ||||| |||||||||||||||| Sbjct: 125353 ctgtccctgcatctggtgtaatagtaatctgtgaaccaca-gggactcagcaatctc 125408 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 atatttggtggctaacttacg 414 ||||||||||||||||||||| Sbjct: 54 atatttggtggctaacttacg 74 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 125118 agttggcttacactcgccac 125137
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 262 cctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctc 313 |||||| ||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 125779 cctgcatctggtgtaatagtaatctgtgagccaca-aggactcagcaatctc 125829 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 262 cctgcaactggtgttgtagtaatctgtgagccacaggggactcagcaatctc 313 |||||| ||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 104680 cctgcatctggtgtaatagtaatctgtgagccaca-aggactcagcaatctc 104730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 125538 agttggcttacactcgccac 125557 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 104439 agttggcttacactcgccac 104458
>gb|AF453683.1| Triticum turgidum subsp. durum isolate TD1 Sukkula retrotransposon, partial sequence Length = 4001 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 135 aacgacgtccatccttgctatcccaggctgc 165 |||||| |||||||||||||||||||||||| Sbjct: 31 aacgacatccatccttgctatcccaggctgc 1
>gb|AF453679.1| Triticum turgidum subsp. dicoccoides isolate TC3 Sukkula retrotransposon, partial sequence Length = 3935 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 135 aacgacgtccatccttgctatcccaggctgc 165 |||||| |||||||||||||||||||||||| Sbjct: 31 aacgacatccatccttgctatcccaggctgc 1
>gb|AF453678.1| Triticum turgidum isolate TC4 Sukkula retrotransposon, partial sequence Length = 3997 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 135 aacgacgtccatccttgctatcccaggctgc 165 |||||| |||||||||||||||||||||||| Sbjct: 31 aacgacatccatccttgctatcccaggctgc 1
>gb|AF453674.1| Triticum aestivum isolate TAEST Sukkula retrotransposon, partial sequence Length = 4120 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 135 aacgacgtccatccttgctatcccaggctgc 165 |||||| |||||||||||||||||||||||| Sbjct: 31 aacgacatccatccttgctatcccaggctgc 1
>gb|AF453669.1| Secale cereale isolate SC1 Sukkula retrotransposon, partial sequence Length = 2924 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 135 aacgacgtccatccttgctatcccaggctgc 165 |||||| |||||||||||||||||||||||| Sbjct: 31 aacgacatccatccttgctatcccaggctgc 1
>gb|AF453668.1| Secale cereale isolate SC2 Sukkula retrotransposon, partial sequence Length = 2923 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 135 aacgacgtccatccttgctatcccaggctgc 165 |||||| |||||||||||||||||||||||| Sbjct: 31 aacgacatccatccttgctatcccaggctgc 1
>gb|AF175285.1|AF175285 Secale cereale clone F17 hypervariable DNA sequence Length = 477 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 285 ctgtgagccacaggggactcagcaatctc 313 ||||||||||||| ||||||||||||||| Sbjct: 438 ctgtgagccacagaggactcagcaatctc 466 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 agttggcttacactcgccac 44 |||||||||||||||||||| Sbjct: 168 agttggcttacactcgccac 187
>gb|AY375391.1| Triticum monococcum clone pTm4-P1 A-genome repetitive DNA sequence Length = 3244 Score = 46.1 bits (23), Expect = 0.092 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 283 atctgtgagccacaggggactcagcaatctc 313 ||||||||||||| ||||||||||||||||| Sbjct: 2257 atctgtgagccac-ggggactcagcaatctc 2228
>ref|NM_119658.2| Arabidopsis thaliana phospholipase C AT4G34920 mRNA, complete cds Length = 1292 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 184 agatcgatgatgaagaagaagaagaag 210 |||| |||||||||||||||||||||| Sbjct: 53 agattgatgatgaagaagaagaagaag 27
>ref|NM_124400.2| Arabidopsis thaliana quinolinate synthetase A AT5G50210 mRNA, complete cds Length = 2598 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tgatgaagaagaagaagaagcaa 213 ||||||||||||||||||||||| Sbjct: 390 tgatgaagaagaagaagaagcaa 368
>ref|NM_122396.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G24870 transcript variant AT5G24870.1 mRNA, complete cds Length = 2086 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 192 cgatgatgaagaagaagaagaag 170
>ref|XM_633602.1| Dictyostelium discoideum inositol 5-phosphatase (DDB0191414), partial mRNA Length = 5403 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 3609 cgatgatgaagaagaagaagaag 3631
>ref|XM_876112.1| PREDICTED: Bos taurus similar to Protein KIAA0179, transcript variant 6 (LOC510240), mRNA Length = 2330 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 196 aagaagaagaagaagcaactcca 218 ||||||||||||||||||||||| Sbjct: 1263 aagaagaagaagaagcaactcca 1285
>ref|XM_876040.1| PREDICTED: Bos taurus similar to Protein KIAA0179, transcript variant 5 (LOC510240), mRNA Length = 2440 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 196 aagaagaagaagaagcaactcca 218 ||||||||||||||||||||||| Sbjct: 1373 aagaagaagaagaagcaactcca 1395
>ref|XM_875973.1| PREDICTED: Bos taurus similar to Protein KIAA0179, transcript variant 4 (LOC510240), mRNA Length = 2324 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 196 aagaagaagaagaagcaactcca 218 ||||||||||||||||||||||| Sbjct: 1257 aagaagaagaagaagcaactcca 1279
>ref|XM_587363.2| PREDICTED: Bos taurus similar to Protein KIAA0179, transcript variant 1 (LOC510240), mRNA Length = 2176 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 196 aagaagaagaagaagcaactcca 218 ||||||||||||||||||||||| Sbjct: 1109 aagaagaagaagaagcaactcca 1131
>ref|XM_865355.1| PREDICTED: Bos taurus similar to Protein KIAA0179, transcript variant 2 (LOC510240), mRNA Length = 2348 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 196 aagaagaagaagaagcaactcca 218 ||||||||||||||||||||||| Sbjct: 1263 aagaagaagaagaagcaactcca 1285
>ref|XM_875760.1| PREDICTED: Bos taurus similar to Protein KIAA0179, transcript variant 3 (LOC510240), mRNA Length = 2256 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 196 aagaagaagaagaagcaactcca 218 ||||||||||||||||||||||| Sbjct: 1189 aagaagaagaagaagcaactcca 1211
>ref|XM_713512.1| Candida albicans SC5314 hypothetical protein (CaO19_10040), mRNA Length = 3633 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 1752 cgatgatgaagaagaagaagaag 1774
>ref|XM_713429.1| Candida albicans SC5314 hypothetical protein (CaO19_2504), mRNA Length = 3633 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 1752 cgatgatgaagaagaagaagaag 1774
>ref|XM_712010.1| Candida albicans SC5314 hypothetical protein (CaO19_5299), mRNA Length = 594 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 195 gaagaagaagaagaagcaactccaaat 221 |||||||||||||||| |||||||||| Sbjct: 517 gaagaagaagaagaagaaactccaaat 543
>gb|AY378152.1| Rosa hybrid cultivar 'Kardinal' 1-aminocyclopropane-1-carboxylate synthase mRNA, complete cds Length = 1750 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 48 cgatgatgaagaagaagaagaag 26
>gb|AY113860.1| Arabidopsis thaliana unknown protein (At5g50210) mRNA, complete cds Length = 2188 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tgatgaagaagaagaagaagcaa 213 ||||||||||||||||||||||| Sbjct: 234 tgatgaagaagaagaagaagcaa 212
>gb|AY035115.1| Arabidopsis thaliana unknown protein (At5g50210) mRNA, complete cds Length = 2598 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tgatgaagaagaagaagaagcaa 213 ||||||||||||||||||||||| Sbjct: 390 tgatgaagaagaagaagaagcaa 368
>emb|AL392145.1|ATT4C12 Arabidopsis thaliana DNA chromosome 5, BAC clone T4C12 (ESSA project) Length = 87871 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 81703 cgatgatgaagaagaagaagaag 81725
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 184 agatcgatgatgaagaagaagaagaag 210 |||| |||||||||||||||||||||| Sbjct: 90515 agattgatgatgaagaagaagaagaag 90489
>emb|AL079347.1|ATF11I11 Arabidopsis thaliana DNA chromosome 4, BAC clone F11I11 (ESSA project) Length = 103150 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 184 agatcgatgatgaagaagaagaagaag 210 |||| |||||||||||||||||||||| Sbjct: 61057 agattgatgatgaagaagaagaagaag 61031
>gb|AY136427.1| Arabidopsis thaliana RING finger-like protein (At5g24870) mRNA, complete cds Length = 1933 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 39 cgatgatgaagaagaagaagaag 17
>gb|AY037233.1| Arabidopsis thaliana AT4g34920/F11I11_160 mRNA, complete cds Length = 1239 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 184 agatcgatgatgaagaagaagaagaag 210 |||| |||||||||||||||||||||| Sbjct: 53 agattgatgatgaagaagaagaagaag 27
>gb|AY184993.1| Dictyostelium discoideum inositol 5-phosphatase 2 gene, complete cds Length = 5562 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 3768 cgatgatgaagaagaagaagaag 3790
>gb|AY085553.1| Arabidopsis thaliana clone 15702 mRNA, complete sequence Length = 2523 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tgatgaagaagaagaagaagcaa 213 ||||||||||||||||||||||| Sbjct: 331 tgatgaagaagaagaagaagcaa 309
>dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6A12 Length = 64136 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tgatgaagaagaagaagaagcaa 213 ||||||||||||||||||||||| Sbjct: 37757 tgatgaagaagaagaagaagcaa 37735
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene, nuclear gene encoding plastid protein, partial cds Length = 9285 Score = 46.1 bits (23), Expect = 0.092 Identities = 49/55 (89%), Gaps = 2/55 (3%) Strand = Plus / Minus Query: 261 acctgcaactggtgttgta-gtaatctgtgagccacaggggactcagcaatctca 314 ||||||||||||| ||| | |||||||||||| || |||||||||||||||||| Sbjct: 2234 acctgcaactggttttggaagtaatctgtgagtcat-ggggactcagcaatctca 2181
>gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome IV, near 60.5 cM, complete sequence Length = 99123 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 188 cgatgatgaagaagaagaagaag 210 ||||||||||||||||||||||| Sbjct: 66167 cgatgatgaagaagaagaagaag 66145
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 20682 gatgatgaagaagaagaagaag 20703
>ref|NM_148229.1| Arabidopsis thaliana unknown protein AT4G04635 mRNA, complete cds Length = 855 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 658 gatgatgaagaagaagaagaag 679
>ref|NM_124599.3| Arabidopsis thaliana unknown protein AT5G52200 mRNA, complete cds Length = 786 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 tgatgaagaagaagaagaagca 212 |||||||||||||||||||||| Sbjct: 310 tgatgaagaagaagaagaagca 331
>ref|NM_105280.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor AT1G66090 mRNA, complete cds Length = 1555 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 110 gatgatgaagaagaagaagaag 89
>ref|NM_120020.3| Arabidopsis thaliana BGAL14; beta-galactosidase/ sugar binding AT4G38590 (BGAL14) mRNA, complete cds Length = 3187 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2597 gatgatgaagaagaagaagaag 2618
>ref|NM_115657.1| Arabidopsis thaliana unknown protein AT3G57950 mRNA, complete cds Length = 546 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 50 gatgatgaagaagaagaagaag 29
>ref|NM_106729.1| Arabidopsis thaliana unknown protein AT1G80810 mRNA, complete cds Length = 2481 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2323 gatgatgaagaagaagaagaag 2344
>ref|NM_101017.2| Arabidopsis thaliana unknown protein AT1G11440 mRNA, complete cds Length = 1303 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 767 gatgatgaagaagaagaagaag 788
>ref|NM_117904.1| Arabidopsis thaliana unknown protein AT4G17940 mRNA, complete cds Length = 1058 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 805 gatgatgaagaagaagaagaag 826
>ref|NM_117528.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G14480 mRNA, complete cds Length = 1464 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 988 gatgatgaagaagaagaagaag 1009
>gb|AC152949.1| Mus musculus 10 BAC RP23-184H3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206898 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 205195 gatgatgaagaagaagaagaag 205216 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 40052 gatgatgaagaagaagaagaag 40031
>gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome 3, complete sequence Length = 204419 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 53461 gatgatgaagaagaagaagaag 53482
>gb|AY728192.1| Dianthus caryophyllus ethylene insensitive 3-like 3 mRNA, complete cds Length = 2187 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 40 gatgatgaagaagaagaagaag 19
>ref|XM_632924.1| Dictyostelium discoideum helicase (DDB0191460), partial mRNA Length = 4164 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 632 gatgatgaagaagaagaagaag 611
>ref|XM_633506.1| Dictyostelium discoideum hypothetical protein (DDB0185982), partial mRNA Length = 2409 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 244 gatgatgaagaagaagaagaag 265
>gb|BC076996.1| Xenopus tropicalis v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian), mRNA (cDNA clone MGC:89626 IMAGE:6995572), complete cds Length = 1782 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1042 gatgatgaagaagaagaagaag 1063
>ref|XM_632338.1| Dictyostelium discoideum hypothetical protein (DDB0218892), partial mRNA Length = 4734 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 287 gatgatgaagaagaagaagaag 266
>ref|XM_638506.1| Dictyostelium discoideum hypothetical protein (DDB0167175), partial mRNA Length = 834 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 754 gatgatgaagaagaagaagaag 775
>gb|AY588398.1| Humulus lupulus clone HlAGA4 microsatellite sequence Length = 352 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 285 gatgatgaagaagaagaagaag 306
>ref|XM_642068.1| Dictyostelium discoideum hypothetical protein (DDB0189401), partial mRNA Length = 672 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 125 gatgatgaagaagaagaagaag 104
>ref|XM_639810.1| Dictyostelium discoideum hypothetical protein (DDB0168922), partial mRNA Length = 1368 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 688 gatgatgaagaagaagaagaag 709
>ref|XM_640096.1| Dictyostelium discoideum hypothetical protein (DDB0168707), partial mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 238 gatgatgaagaagaagaagaag 259
>ref|XM_638213.1| Dictyostelium discoideum hypothetical protein (DDB0169480), partial mRNA Length = 2943 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 tcgatgatgaagaagaagaaga 208 |||||||||||||||||||||| Sbjct: 1213 tcgatgatgaagaagaagaaga 1192
>ref|XM_637464.1| Dictyostelium discoideum hypothetical protein (DDB0218002), partial mRNA Length = 4164 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1465 gatgatgaagaagaagaagaag 1486
>ref|XM_636111.1| Dictyostelium discoideum hypothetical protein (DDB0205231), partial mRNA Length = 915 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 310 gatgatgaagaagaagaagaag 331
>ref|XM_630308.1| Dictyostelium discoideum hypothetical protein (DDB0189238), partial mRNA Length = 4224 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 3410 gatgatgaagaagaagaagaag 3389
>ref|XM_634028.1| Dictyostelium discoideum hypothetical protein (DDB0218485), partial mRNA Length = 5541 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1852 gatgatgaagaagaagaagaag 1873
>ref|XM_633701.1| Dictyostelium discoideum hypothetical protein (DDB0218548), partial mRNA Length = 3363 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 779 gatgatgaagaagaagaagaag 758
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence Length = 177167 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 gatgaagaagaagaagaagcaa 213 |||||||||||||||||||||| Sbjct: 6576 gatgaagaagaagaagaagcaa 6555
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 88522 gatgatgaagaagaagaagaag 88501
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 19 ataaagagttggcttacactcgccac 44 |||||||||||||||||| ||||||| Sbjct: 74901 ataaagagttggcttacaatcgccac 74876
>gb|AF140073.1| Apis mellifera carnica microsatellite 4A44 sequence Length = 529 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 273 gatgatgaagaagaagaagaag 252
>gb|AE001396.1| Plasmodium falciparum 3D7 chromosome 2 section 33 of 73 of the complete sequence Length = 14613 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 4830 gatgatgaagaagaagaagaag 4851
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 55187 gatgatgaagaagaagaagaag 55208
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence Length = 74841 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 tgatgaagaagaagaagaagca 212 |||||||||||||||||||||| Sbjct: 55621 tgatgaagaagaagaagaagca 55642
>gb|AC113113.18| Mus musculus chromosome 16, clone RP23-334P10, complete sequence Length = 216380 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 21517 gatgatgaagaagaagaagaag 21538
>gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome 9, complete sequence Length = 175636 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 128623 gatgatgaagaagaagaagaag 128644
>gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's Hospital Oakland Research Institute) complete sequence Length = 234420 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 25438 gatgatgaagaagaagaagaag 25417
>ref|XM_459051.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D14542g) partial mRNA Length = 2883 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2812 gatgatgaagaagaagaagaag 2833
>ref|XM_957183.1| Neurospora crassa OR74A hypothetical protein (NCU06569.1) partial mRNA Length = 2418 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2296 gatgatgaagaagaagaagaag 2317
>ref|XM_326423.1| Neurospora crassa OR74A hypothetical protein (NCU06569.1) partial mRNA Length = 2418 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2296 gatgatgaagaagaagaagaag 2317
>ref|XM_716472.1| Candida albicans SC5314 hypothetical protein (CaO19_9174), mRNA Length = 1599 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 751 gatgatgaagaagaagaagaag 772
>ref|XM_715816.1| Candida albicans SC5314 hypothetical protein (CaO19_13939), mRNA Length = 942 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 334 gatgatgaagaagaagaagaag 355
>ref|XM_715040.1| Candida albicans SC5314 hypothetical protein (CaO19_7938), mRNA Length = 1860 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 254 gatgatgaagaagaagaagaag 233
>ref|XM_714908.1| Candida albicans SC5314 hypothetical protein (CaO19_306), mRNA Length = 1860 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 254 gatgatgaagaagaagaagaag 233
>ref|XM_705356.1| Candida albicans SC5314 putative U3 snoRNP protein Utp20p (CaO19.10668), mRNA Length = 3594 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2768 gatgatgaagaagaagaagaag 2747
>ref|XM_705349.1| Candida albicans SC5314 putative U3 snoRNP protein Utp20p (CaO19.3159), mRNA Length = 3594 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2768 gatgatgaagaagaagaagaag 2747
>ref|XM_709056.1| Candida albicans SC5314 hypothetical protein (CaO19.11599), mRNA Length = 684 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 47 gatgatgaagaagaagaagaag 26
>ref|XM_707905.1| Candida albicans SC5314 hyphal-specific cell wall protein ECE2 (CaO19.8901), mRNA Length = 1905 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 656 gatgatgaagaagaagaagaag 635
>ref|XM_706364.1| Candida albicans SC5314 hypothetical protein (CaO19.9357), mRNA Length = 1476 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 104 gatgatgaagaagaagaagaag 83
>ref|XM_706347.1| Candida albicans SC5314 hypothetical protein (CaO19.1791), mRNA Length = 1476 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 104 gatgatgaagaagaagaagaag 83
>ref|XM_705674.1| Candida albicans SC5314 hypothetical protein (CaO19.11182), mRNA Length = 681 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 284 gatgatgaagaagaagaagaag 263
>ref|XM_704869.1| Candida albicans SC5314 hyphal-specific cell wall protein ECE2 (CaO19.1321), mRNA Length = 1905 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 656 gatgatgaagaagaagaagaag 635
>ref|XM_704868.1| Candida albicans SC5314 hypothetical protein (CaO19.1320), mRNA Length = 525 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 352 gatgatgaagaagaagaagaag 373
>ref|XM_658754.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6242.2), mRNA Length = 525 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 463 gatgatgaagaagaagaagaag 484
>gb|AC153518.14| Mus musculus 10 BAC RP23-426B18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160531 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 141721 gatgatgaagaagaagaagaag 141700
>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence Length = 174557 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 65519 gatgatgaagaagaagaagaag 65498
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 196 aagaagaagaagaagcaactccaaat 221 ||||||||||||||| |||||||||| Sbjct: 12956681 aagaagaagaagaagaaactccaaat 12956656 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaagcaa 213 |||||||| |||||||||||||||| Sbjct: 24910984 gatgatgatgaagaagaagaagcaa 24910960 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gaagaagaagaagaagcaac 214 |||||||||||||||||||| Sbjct: 23338204 gaagaagaagaagaagcaac 23338185
>gb|AC164559.3| Mus musculus BAC clone RP23-198H17 from chromosome 6, complete sequence Length = 194636 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 171639 gatgatgaagaagaagaagaag 171618
>ref|XM_973116.1| PREDICTED: Mus musculus hypothetical protein LOC669115 (LOC669115), mRNA Length = 375 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 58 gatgatgaagaagaagaagaag 79
>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence Length = 331039 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 tcgatgatgaagaagaagaaga 208 |||||||||||||||||||||| Sbjct: 147543 tcgatgatgaagaagaagaaga 147522
>gb|AC115607.2| Dictyostelium discoideum chromosome 2 map 4559693-4624405 strain AX4, complete sequence Length = 64707 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 26949 gatgatgaagaagaagaagaag 26970
>gb|AC116551.2| Dictyostelium discoideum chromosome 2 map complement(581327-427576) strain AX4, complete sequence Length = 153751 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 86945 gatgatgaagaagaagaagaag 86966
>ref|XM_844834.1| PREDICTED: Canis familiaris similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002), transcript variant 2 (LOC608403), mRNA Length = 1759 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 771 gatgatgaagaagaagaagaag 792
>ref|XM_855074.1| PREDICTED: Canis familiaris similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A) (Template activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002), transcript variant 3 (LOC608403), mRNA Length = 1294 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 306 gatgatgaagaagaagaagaag 327
>ref|XM_973114.1| PREDICTED: Mus musculus hypothetical protein LOC664863 (LOC664863), mRNA Length = 375 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 58 gatgatgaagaagaagaagaag 79
>gb|AY310388.1| Spartina alterniflora clone SPAR.03H microsatellite sequence Length = 545 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 485 gatgatgaagaagaagaagaag 464
>gb|AC133191.3| Mus musculus chromosome 18 clone RP23-390K15, complete sequence Length = 212060 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 211901 gatgatgaagaagaagaagaag 211922
>gb|AC102125.13| Mus musculus chromosome 6, clone RP23-190E16, complete sequence Length = 219870 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 187535 gatgatgaagaagaagaagaag 187556
>ref|XM_975279.1| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC669474), mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 600 gatgatgaagaagaagaagaag 621
>ref|XM_994119.1| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC624165), mRNA Length = 1171 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 609 gatgatgaagaagaagaagaag 630
>ref|XM_992884.1| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC676786), mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 600 gatgatgaagaagaagaagaag 621
>ref|XM_907784.2| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC633387), mRNA Length = 736 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 609 gatgatgaagaagaagaagaag 630
>ref|XM_001001040.1| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC668347), mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 600 gatgatgaagaagaagaagaag 621
>ref|XM_890841.2| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38), transcript variant 1 (LOC624165), mRNA Length = 1171 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 609 gatgatgaagaagaagaagaag 630
>gb|AC145302.4| Mus musculus BAC clone RP24-89K13 from chromosome Y, complete sequence Length = 168641 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 21690 gatgatgaagaagaagaagaag 21711
>emb|CR762406.10| Zebrafish DNA sequence from clone DKEY-13D23 in linkage group 1, complete sequence Length = 144021 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 53940 gatgatgaagaagaagaagaag 53961
>ref|XM_532624.2| PREDICTED: Canis familiaris similar to chromodomain helicase DNA binding protein 8, transcript variant 1 (LOC475401), mRNA Length = 7415 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1034 gatgatgaagaagaagaagaag 1055
>ref|XM_381610.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01434.1) partial mRNA Length = 1134 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 508 gatgatgaagaagaagaagaag 529
>gb|DQ459191.1| Arabidopsis thaliana unknown (At3g57950) gene, complete cds Length = 546 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 50 gatgatgaagaagaagaagaag 29
>gb|AC139039.9| Mus musculus chromosome 16, clone RP23-300H4, complete sequence Length = 202308 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 199721 gatgatgaagaagaagaagaag 199742
>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence Length = 160180 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 69646 gatgatgaagaagaagaagaag 69625
>gb|AC127586.4| Mus musculus BAC clone RP24-142A16 from chromosome 7, complete sequence Length = 164692 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 150407 gatgatgaagaagaagaagaag 150386
>gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome 7, complete sequence Length = 225829 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 131599 gatgatgaagaagaagaagaag 131620 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 105501 gatgatgaagaagaagaagaag 105522
>ref|XM_854550.1| PREDICTED: Canis familiaris similar to senataxin, transcript variant 2 (LOC480691), mRNA Length = 8571 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 3082 gatgatgaagaagaagaagaag 3103
>ref|XM_537811.2| PREDICTED: Canis familiaris similar to senataxin, transcript variant 1 (LOC480691), mRNA Length = 8670 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 3082 gatgatgaagaagaagaagaag 3103
>gb|AC120837.6| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-439E2, Complete Sequence, complete sequence Length = 211996 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 113283 gatgatgaagaagaagaagaag 113262
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaagcaac 214 ||||||||||||||||||||| |||| Sbjct: 108593 gatgatgaagaagaagaagaaacaac 108618
>gb|AC125526.4| Mus musculus BAC clone RP24-498L21 from chromosome 15, complete sequence Length = 178670 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 150092 gatgatgaagaagaagaagaag 150071
>gb|AC124501.3| Mus musculus BAC clone RP23-412F10 from chromosome 6, complete sequence Length = 210057 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 70637 gatgatgaagaagaagaagaag 70616
>gb|AC127267.3| Mus musculus BAC clone RP23-401H14 from chromosome 6, complete sequence Length = 186704 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 122933 gatgatgaagaagaagaagaag 122912
>ref|XM_883673.1| Candida albicans SC5314 hypothetical protein (CaJ7.0158) partial mRNA Length = 942 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 334 gatgatgaagaagaagaagaag 355
>ref|XM_883788.1| Candida albicans SC5314 hypothetical protein (CaJ7.0307) partial mRNA Length = 681 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 284 gatgatgaagaagaagaagaag 263
>ref|XM_716329.1| Candida albicans SC5314 hypothetical protein (CaO19.6586) partial mRNA Length = 942 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 334 gatgatgaagaagaagaagaag 355
>ref|XM_705655.1| Candida albicans SC5314 hypothetical protein (CaO19.3698) partial mRNA Length = 681 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 284 gatgatgaagaagaagaagaag 263
>gb|AC121838.2| Mus musculus BAC clone RP24-74O18 from 1, complete sequence Length = 180961 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 138480 gatgatgaagaagaagaagaag 138501
>gb|AC121868.2| Mus musculus BAC clone RP24-116H17 from 1, complete sequence Length = 209039 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 24776 gatgatgaagaagaagaagaag 24797
>ref|XM_651036.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (17.t00039) partial mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 478 gatgatgaagaagaagaagaag 499
>gb|AC117615.11| Mus musculus chromosome 19, clone RP23-110D20, complete sequence Length = 191809 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 75238 gatgatgaagaagaagaagaag 75217 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaaga 208 |||||||||||||||||||| Sbjct: 75262 gatgatgaagaagaagaaga 75243
>gb|BC053442.1| Mus musculus RIKEN cDNA 2810002O09 gene, mRNA (cDNA clone IMAGE:6333717), partial cds Length = 1458 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1380 gatgatgaagaagaagaagaag 1401
>ref|XM_719824.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04595) partial mRNA Length = 3147 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2221 gatgatgaagaagaagaagaag 2242
>ref|XM_725644.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02808) partial mRNA Length = 1182 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 358 gatgatgaagaagaagaagaag 379
>ref|XM_736009.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000863.03.0) partial mRNA Length = 2001 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1084 gatgatgaagaagaagaagaag 1105
>ref|XM_668171.1| Plasmodium berghei strain ANKA hypothetical protein (PB000518.03.0) partial mRNA Length = 1167 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 cgatgatgaagaagaagaagaa 209 |||||||||||||||||||||| Sbjct: 930 cgatgatgaagaagaagaagaa 951
>gb|AC116458.9| Mus musculus chromosome 16, clone RP23-11L14, complete sequence Length = 219241 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 18421 gatgatgaagaagaagaagaag 18442
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 66122 gatgatgaagaagaagaagaag 66143
>gb|AC154556.2| Mus musculus BAC clone RP23-423F3 from chromosome 14, complete sequence Length = 189092 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 128805 gatgatgaagaagaagaagaag 128826
>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence Length = 105004 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 100397 gatgatgaagaagaagaagaag 100376
>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence Length = 129728 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 122970 gatgatgaagaagaagaagaag 122991
>gb|AC144799.3| Mus musculus chromosome 18 clone RP24-299J7, complete sequence Length = 192272 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 155464 gatgatgaagaagaagaagaag 155443
>emb|Z97987.1|HS453P22 Human DNA sequence from clone RP3-453P22 on chromosome 1p36.2-36.3 Contains two novel genes, complete sequence Length = 155176 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 10987 gatgatgaagaagaagaagaag 10966
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete sequence Length = 250029 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 49728 gatgatgaagaagaagaagaag 49749 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 45083 gatgatgaagaagaagaagaag 45104
>gb|AY157667.1| Xenopus laevis HMG transcription factor (Sox10) mRNA, complete cds Length = 2818 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 204 gatgatgaagaagaagaagaag 225
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 35397 gatgatgaagaagaagaagaag 35418
>gb|AY149116.1| Xenopus laevis transcription factor Sox10 mRNA, complete cds Length = 3324 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 225 gatgatgaagaagaagaagaag 246
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 88558 gatgatgaagaagaagaagaag 88537
>emb|Z73546.1|SCYPL190C S.cerevisiae chromosome XVI reading frame ORF YPL190c Length = 4474 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2671 gatgatgaagaagaagaagaag 2650
>emb|X96770.1|SCLACHXVI S.cerevisiae chromosome XVI, left arm DNA Length = 55786 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 25498 gatgatgaagaagaagaagaag 25477 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaa 209 ||||||||||||||||||||| Sbjct: 25432 gatgatgaagaagaagaagaa 25412
>gb|AY113882.1| Arabidopsis thaliana putative disease resistance protein (At1g66090) mRNA, complete cds Length = 1321 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 35 gatgatgaagaagaagaagaag 14
>ref|XM_778916.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5824-PA (LOC578764), mRNA Length = 2607 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1054 gatgatgaagaagaagaagaag 1075
>gb|AF360148.1| Arabidopsis thaliana putative disease resistance protein (At1g66090) mRNA, complete cds Length = 1529 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 68 gatgatgaagaagaagaagaag 47
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1110704 gatgatgaagaagaagaagaag 1110683
>emb|AL596025.22| Mouse DNA sequence from clone RP23-215H18 on chromosome 11 Contains a novel gene and the 3' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9), complete sequence Length = 190066 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 96137 gatgatgaagaagaagaagaag 96116
>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the 5' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 144847 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 23185 gatgatgaagaagaagaagaag 23206
>ref|NM_001016456.2| Xenopus tropicalis nucleophosmin/nucleoplasmin, 3 (npm3), mRNA Length = 2175 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 667 gatgatgaagaagaagaagaag 688
>ref|NM_001006873.1| Xenopus tropicalis v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) (mycn), mRNA Length = 1782 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1042 gatgatgaagaagaagaagaag 1063
>emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5 Length = 330050 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 119313 gatgatgaagaagaagaagaag 119292 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 atgatgaagaagaagaagaag 210 ||||||||||||||||||||| Sbjct: 119399 atgatgaagaagaagaagaag 119379 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 atgatgaagaagaagaagaag 210 ||||||||||||||||||||| Sbjct: 119345 atgatgaagaagaagaagaag 119325 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaaga 208 |||||||||||||||||||| Sbjct: 119421 gatgatgaagaagaagaaga 119402 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaaga 208 |||||||||||||||||||| Sbjct: 119367 gatgatgaagaagaagaaga 119348
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4 Length = 340552 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 298403 gatgatgaagaagaagaagaag 298382
>emb|AJ002486.1|MSAJ2486 Medicago sativa mRNA for protein phosphatase 1, gamma subunit Length = 1554 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 144 gatgatgaagaagaagaagaag 123
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 148855 gatgatgaagaagaagaagaag 148876
>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73 Length = 194862 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 63206 gatgatgaagaagaagaagaag 63227
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47 Length = 198067 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 127061 gatgatgaagaagaagaagaag 127082
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 34054 gatgatgaagaagaagaagaag 34033
>emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 13 Length = 200001 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 75975 gatgatgaagaagaagaagaag 75996
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 62938 gatgatgaagaagaagaagaag 62959
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 55551 gatgatgaagaagaagaagaag 55530
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 Length = 349751 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 201370 gatgatgaagaagaagaagaag 201391
>emb|AL021889.2|ATT6K21 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K21 (ESSA project) Length = 99643 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 50680 gatgatgaagaagaagaagaag 50701
>gb|AC164168.3| Mus musculus 6 BAC RP23-343D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 236103 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 152856 gatgatgaagaagaagaagaag 152835
>emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on chromosome 1 Contains two novel genes, complete sequence Length = 159399 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 126795 gatgatgaagaagaagaagaag 126774
>emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chromosome 1 Contains a SEC61 gamma subunit (Sec61g) pseudogene, a limb expression 1 homolog (chicken) (Lix1) pseudogene, a novel pseudogene, the 5' end of the gene for an ortholog of human Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 RAPH1 and a CpG island, complete sequence Length = 198631 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 147016 gatgatgaagaagaagaagaag 146995
>emb|AL646089.6| Mouse DNA sequence from clone RP23-169P3 on chromosome 11, complete sequence Length = 30135 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 10599 gatgatgaagaagaagaagaag 10620
>emb|AL663082.5| Mouse DNA sequence from clone RP23-327G1 on chromosome 11 Contains the 3' end of the Ankfy1 gene for ankyrin repeat and FYVE domain containing 1, a new gene, the gene for a novel ZZ type zinc finger domain containing protein, the 5' end of the Atp2a3 gene for ubiquitous Ca++ transporting ATPase and two CpG islands, complete sequence Length = 243654 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 89878 gatgatgaagaagaagaagaag 89899
>emb|BX088573.4| Mouse DNA sequence from clone RP23-78N10 on chromosome 4 Contains the 3' end of the Dbccr1 gene for deleted in bladder cancer chromosome region candidate 1 (human), complete sequence Length = 203865 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 95397 gatgatgaagaagaagaagaag 95376
>emb|AL845340.11| Mouse DNA sequence from clone RP23-169D3 on chromosome 4 Contains a novel gene and a CpG island, complete sequence Length = 193243 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 26799 gatgatgaagaagaagaagaag 26820
>emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chromosome 3 Contains part of a novel gene, a ribosomal protein L36 (Rpl36) pseudogene and a pseudogene similar to part of ribosomal protein S2 (Rps2), complete sequence Length = 141661 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 26346 gatgatgaagaagaagaagaag 26325
>gb|AC122546.14| Mus musculus chromosome 5, clone RP23-408A1, complete sequence Length = 191640 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 178481 gatgatgaagaagaagaagaag 178460
>gb|AC175056.3| Mus musculus BAC clone RP24-212M24 from chromosome y, complete sequence Length = 166788 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 159380 gatgatgaagaagaagaagaag 159401
>gb|AC010058.7| Drosophila melanogaster 3L BAC RP98-26L14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181950 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 78366 gatgatgaagaagaagaagaag 78387
>gb|AC183526.2| Mus musculus BAC clone RP24-121M8 from chromosome y, complete sequence Length = 175230 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 137601 gatgatgaagaagaagaagaag 137622
>gb|AY116938.1| Arabidopsis thaliana AT5g52200/F17P19_10 mRNA, complete cds Length = 576 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 tgatgaagaagaagaagaagca 212 |||||||||||||||||||||| Sbjct: 279 tgatgaagaagaagaagaagca 300
>gb|AC148346.12| Medicago truncatula clone mth2-25m19, complete sequence Length = 122590 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 10429 gatgatgaagaagaagaagaag 10450
>gb|AC149578.15| Medicago truncatula clone mth2-94f23, complete sequence Length = 119657 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 3825 gatgatgaagaagaagaagaag 3804
>gb|AF324790.1| Pinus taeda clone PtTX4149 microsatellite sequence Length = 360 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 222 gatgatgaagaagaagaagaag 201
>gb|AF351538.1| Gossypium hirsutum clone JESPR300 microsatellite sequence Length = 294 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 224 gatgatgaagaagaagaagaag 203
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1499537 gatgatgaagaagaagaagaag 1499558
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 114213 gatgatgaagaagaagaagaag 114234
>ref|XM_631528.1| Dictyostelium discoideum AX4 hypothetical protein (DDB0188026), partial mRNA Length = 2316 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1861 gatgatgaagaagaagaagaag 1882
>gb|AC134836.6| Mus musculus BAC clone RP24-323I5 from chromosome 6, complete sequence Length = 150705 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 12913 gatgatgaagaagaagaagaag 12934
>gb|AC020632.16| Homo sapiens 3 BAC RP11-333H9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162029 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 37704 gatgatgaagaagaagaagaag 37683
>gb|AC022880.10| Homo sapiens chromosome , clone RP11-436P7, complete sequence Length = 166306 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 190 atgatgaagaagaagaagaagcaact 215 ||||||||||||||||||||| |||| Sbjct: 136631 atgatgaagaagaagaagaagaaact 136606
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 110437 gatgatgaagaagaagaagaag 110458
>gb|BC097265.1| Rattus norvegicus thioredoxin domain containing 3 (spermatozoa), mRNA (cDNA clone IMAGE:7455991), complete cds Length = 1873 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 776 gatgatgaagaagaagaagaag 797
>gb|AC109243.10| Mus musculus chromosome 18, clone RP23-139O19, complete sequence Length = 186687 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 27627 gatgatgaagaagaagaagaag 27648
>gb|AY050347.1| Arabidopsis thaliana AT5g52200/F17P19_10 mRNA, complete cds Length = 780 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 tgatgaagaagaagaagaagca 212 |||||||||||||||||||||| Sbjct: 309 tgatgaagaagaagaagaagca 330
>gb|BT006248.1| Arabidopsis thaliana At1g11440 mRNA, complete cds Length = 1092 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 709 gatgatgaagaagaagaagaag 730
>gb|AC114533.17| Mus musculus chromosome 1, clone RP24-255G23, complete sequence Length = 147505 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 16438 gatgatgaagaagaagaagaag 16459
>dbj|AK049774.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530048I19 product:hypothetical protein, full insert sequence Length = 1418 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1394 gatgatgaagaagaagaagaag 1415
>dbj|AK050502.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820005A18 product:unclassifiable, full insert sequence Length = 3318 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 166 gatgatgaagaagaagaagaag 145
>ref|NM_182000.1| Caenorhabditis elegans Y18D10A.1 (Y18D10A.1) mRNA, complete cds Length = 4905 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 805 gatgatgaagaagaagaagaag 826
>gb|AC133868.10| Mus musculus chromosome 15, clone RP24-430H1, complete sequence Length = 142534 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 64124 gatgatgaagaagaagaagaag 64103
>gb|AC155641.8| Mus musculus 10 BAC RP24-121N1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195480 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 154463 gatgatgaagaagaagaagaag 154442
>ref|XM_395730.2| PREDICTED: Apis mellifera similar to CG5930-PA, isoform A (LOC412268), mRNA Length = 1081 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 785 gatgatgaagaagaagaagaag 806
>ref|XM_393301.2| PREDICTED: Apis mellifera similar to ENSANGP00000015405 (LOC409810), mRNA Length = 2085 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 2005 gatgatgaagaagaagaagaag 2026
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 gatgatgaagaagaagaagaag 210 |||||||||||||||||||||| Sbjct: 1416602 gatgatgaagaagaagaagaag 1416623 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cgatgatgaagaagaagaaga 208 ||||||||||||||||||||| Sbjct: 24570857 cgatgatgaagaagaagaaga 24570837 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 atcgatgatgaagaagaagaagaag 210 |||||||| |||||||||||||||| Sbjct: 24095224 atcgatgaagaagaagaagaagaag 24095200 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 atgatgaagaagaagaagaagcaa 213 |||||||||||||||| ||||||| Sbjct: 1978758 atgatgaagaagaagacgaagcaa 1978781 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 tcgatgatgaagaagaagaagaag 210 |||| ||||||||||||||||||| Sbjct: 1713765 tcgacgatgaagaagaagaagaag 1713742 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,325,559 Number of Sequences: 3902068 Number of extensions: 5325559 Number of successful extensions: 749497 Number of sequences better than 10.0: 1036 Number of HSP's better than 10.0 without gapping: 1042 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 732602 Number of HSP's gapped (non-prelim): 16580 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
