>COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -1

Query: 413 IRSKTQGIALSLGDKITLKQK 351
           IR+K+QG+ALSLGDKI L QK
Sbjct: 929 IRAKSQGMALSLGDKINLSQK 949

>COPB_MOUSE (Q9JIF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -1

Query: 413 IRSKTQGIALSLGDKITLKQK 351
           IR+K+QG+ALSLGDKI L QK
Sbjct: 929 IRAKSQGMALSLGDKINLSQK 949

>COPB_HUMAN (P53618) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -1

Query: 413 IRSKTQGIALSLGDKITLKQK 351
           IR+K+QG+ALSLGDKI L QK
Sbjct: 929 IRAKSQGMALSLGDKINLSQK 949

>COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 964

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -1

Query: 413  IRSKTQGIALSLGDKITLKQK 351
            IR+K+QG+ALSLGDKI+  QK
Sbjct: 938  IRAKSQGMALSLGDKISSSQK 958

>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 973

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -1

Query: 413  IRSKTQGIALSLGDKITLKQK 351
            IRSK QG+ALSLGD++ L  K
Sbjct: 943  IRSKGQGLALSLGDRVALIAK 963

>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +2

Query: 8   KSMRH*KGPEIQYLNP----TPTQTSHLFLHHRFLSKKASSWKGVGRDHCISRGH 160
           +  R+   PE ++L      TPTQ    F +HR+ +K+A + KG      +  GH
Sbjct: 565 RQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGH 619

>HNK2_XENLA (P42587) Homeobox protein XENK-2|
          Length = 196

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +2

Query: 8   KSMRH*KGPEIQYLNP----TPTQTSHLFLHHRFLSKKASSWKGV 130
           +  R+   PE ++L      TPTQ    F +HR+  K+A S KG+
Sbjct: 89  RQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARSEKGM 133

>INP4A_RAT (Q62784) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 939

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 287 LAKWTSYMTQLQQIASQLNCLPSA*G*SCLPS*VQFLG 400
           L +  SY  Q +++  + +CLP +   +CLP  ++FLG
Sbjct: 789 LVRLNSYFEQFKEVLPE-DCLPRSRSQTCLPELLRFLG 825

>INP4A_MOUSE (Q9EPW0) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 939

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 251 TSLLAHCTGSMKLAKWTSYMTQLQQIASQLNCLPSA*G*SCLPS*VQFLG 400
           TSL     G   L +  SY  Q +++  + +CLP +   +CLP  ++FLG
Sbjct: 778 TSLQEGINGE-SLVRVNSYFEQFKEVLPE-DCLPRSRSQTCLPELLRFLG 825

>NX22A_BRARE (Q90481) Homeobox protein Nkx-2.2a (Homeobox protein NK-2 homolog|
           B)
          Length = 269

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = +2

Query: 8   KSMRH*KGPEIQYLNP----TPTQTSHLFLHHRFLSKKASSWKGVGRDH 142
           +  R+   PE ++L      TPTQ    F +HR+  K+A + KG+   H
Sbjct: 145 RQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTH 193

>INP4A_HUMAN (Q96PE3) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 977

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 287 LAKWTSYMTQLQQIASQLNCLPSA*G*SCLPS*VQFLG 400
           L +  SY  Q +++  + +CLP +   +CLP  ++FLG
Sbjct: 827 LVRLNSYFEQFKEVLPE-DCLPRSRSQTCLPELLRFLG 863


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,498,757
Number of Sequences: 219361
Number of extensions: 1013248
Number of successful extensions: 2568
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2568
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)