ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477026.1| Oryza sativa (japonica cultivar-group), mRNA 139 6e-30
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 139 6e-30
3dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 139 6e-30
4dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D... 139 6e-30
5dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 6e-30
6gb|BT017026.1| Zea mays clone EK07D2312G12.c mRNA sequence 111 1e-21
7gb|BT017505.1| Zea mays clone EL01N0414H09.c mRNA sequence 78 2e-11
8ref|NM_187618.1| Oryza sativa (japonica cultivar-group), predic... 76 7e-11
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 76 7e-11
10gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 76 7e-11
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 76 7e-11
12dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 7e-11
13gb|AY111369.1| Zea mays CL858_1 mRNA sequence 56 6e-05
14emb|AL445593.3|CNS07ED3 Human chromosome 14 DNA sequence BAC C-2... 44 0.25
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
16dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
17dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
18dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 0.97
19gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, com... 40 3.8
20gb|AC073182.4| Homo sapiens BAC clone CTD-2012B24 from 7, comple... 40 3.8
21emb|AL672014.10| Human DNA sequence from clone RP11-251P6 on chr... 40 3.8
22gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Ho... 40 3.8
23emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 3.8
24emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1... 40 3.8
25gb|AC079362.36| Homo sapiens 12 BAC RP11-754N21 (Roswell Park Ca... 40 3.8
26gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, comp... 40 3.8
27dbj|AK031002.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 3.8
28emb|AL929238.22| Mouse DNA sequence from clone RP23-480I16 on ch... 40 3.8
29gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complet... 40 3.8
30emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, ... 40 3.8
31emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 i... 40 3.8
32emb|AL806515.7| Mouse DNA sequence from clone RP23-434M18 on chr... 40 3.8
33emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in... 40 3.8
34emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on ch... 40 3.8
35emb|AL845468.4| Mouse DNA sequence from clone RP23-67E6 on chrom... 40 3.8 
>ref|XM_477026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3193

 Score =  139 bits (70), Expect = 6e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 228
            |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 2900 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 2841

                                                                        
Query: 229  cagctagctacatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 288
            | ||||||| |||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 2840 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 2781

                  
Query: 289  ctttca 294
            ||||||
Sbjct: 2780 ctttca 2775
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  139 bits (70), Expect = 6e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                           
Query: 169     tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 228
               |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 5491408 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 5491349

                                                                           
Query: 229     cagctagctacatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 288
               | ||||||| |||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 5491348 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 5491289

                     
Query: 289     ctttca 294
               ||||||
Sbjct: 5491288 ctttca 5491283
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0081K20
          Length = 117287

 Score =  139 bits (70), Expect = 6e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 228
            |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 4493 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 4434

                                                                        
Query: 229  cagctagctacatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 288
            | ||||||| |||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 4433 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 4374

                  
Query: 289  ctttca 294
            ||||||
Sbjct: 4373 ctttca 4368
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>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E02
          Length = 139321

 Score =  139 bits (70), Expect = 6e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                          
Query: 169    tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 228
              |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 125389 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 125330

                                                                          
Query: 229    cagctagctacatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 288
              | ||||||| |||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 125329 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 125270

                    
Query: 289    ctttca 294
              ||||||
Sbjct: 125269 ctttca 125264
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>dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B12, full
            insert sequence
          Length = 3193

 Score =  139 bits (70), Expect = 6e-30
 Identities = 112/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 228
            |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 2900 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 2841

                                                                        
Query: 229  cagctagctacatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 288
            | ||||||| |||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 2840 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 2781

                  
Query: 289  ctttca 294
            ||||||
Sbjct: 2780 ctttca 2775
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>gb|BT017026.1| Zea mays clone EK07D2312G12.c mRNA sequence
          Length = 1125

 Score =  111 bits (56), Expect = 1e-21
 Identities = 110/128 (85%)
 Strand = Plus / Minus

                                                                       
Query: 167 gttttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatct 226
           |||||||||||| || |||||||| |||||||||||||||| ||| |||||||| |||||
Sbjct: 960 gttttagccattagcgacaatttcgtggatcctgtcactgatctctggatcatcagatct 901

                                                                       
Query: 227 gacagctagctacatggccacttctttcggcccgctgattccaaatgatagtctcaccaa 286
            || || |||| ||||||||| || |||||  | || ||||||||||| |||||||||||
Sbjct: 900 aactgccagcttcatggccacctccttcggtgcactaattccaaatgacagtctcaccaa 841

                   
Query: 287 aactttca 294
            |||||||
Sbjct: 840 gactttca 833
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>gb|BT017505.1| Zea mays clone EL01N0414H09.c mRNA sequence
          Length = 886

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 184 caatttcatggatcctgtcactgacctccggatcatctgatctgacagctagctacatgg 243
           ||||||| |||||| ||||||||| ||| |||||||| ||||| || || || | |||||
Sbjct: 679 caatttcgtggatcttgtcactgagctctggatcatcagatctaactgccaggttcatgg 620

                                                              
Query: 244 ccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttca 294
           |||| || |||||  | ||||||||||| || ||||||||||| |||||||
Sbjct: 619 ccacctccttcggggcactgattccaaaggaaagtctcaccaagactttca 569
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>ref|NM_187618.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2481

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                        
Query: 180  gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagctac 239
            |||||||| || |||||| |||||||||| || ||||||||||| ||||| || |||| |
Sbjct: 2471 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 2412

                                                  
Query: 240  atggccacttctttcggcccgctgattccaaatgatag 277
            || |||||||| || |||||||| | |||||| |||||
Sbjct: 2411 atcgccacttccttgggcccgctcagtccaaacgatag 2374
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                           
Query: 180     gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagctac 239
               |||||||| || |||||| |||||||||| || ||||||||||| ||||| || |||| |
Sbjct: 6651732 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 6651673

                                                     
Query: 240     atggccacttctttcggcccgctgattccaaatgatag 277
               || |||||||| || |||||||| | |||||| |||||
Sbjct: 6651672 atcgccacttccttgggcccgctcagtccaaacgatag 6651635
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>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
             complete sequence
          Length = 127946

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 180   gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagctac 239
             |||||||| || |||||| |||||||||| || ||||||||||| ||||| || |||| |
Sbjct: 37280 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 37221

                                                   
Query: 240   atggccacttctttcggcccgctgattccaaatgatag 277
             || |||||||| || |||||||| | |||||| |||||
Sbjct: 37220 atcgccacttccttgggcccgctcagtccaaacgatag 37183
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                           
Query: 180     gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagctac 239
               |||||||| || |||||| |||||||||| || ||||||||||| ||||| || |||| |
Sbjct: 6650945 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 6650886

                                                     
Query: 240     atggccacttctttcggcccgctgattccaaatgatag 277
               || |||||||| || |||||||| | |||||| |||||
Sbjct: 6650885 atcgccacttccttgggcccgctcagtccaaacgatag 6650848
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>dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G01, full
            insert sequence
          Length = 3214

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                        
Query: 180  gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagctac 239
            |||||||| || |||||| |||||||||| || ||||||||||| ||||| || |||| |
Sbjct: 2825 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 2766

                                                  
Query: 240  atggccacttctttcggcccgctgattccaaatgatag 277
            || |||||||| || |||||||| | |||||| |||||
Sbjct: 2765 atcgccacttccttgggcccgctcagtccaaacgatag 2728
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>gb|AY111369.1| Zea mays CL858_1 mRNA sequence
          Length = 1437

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 183  acaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagctacatg 242
            ||||| ||||| ||| | |||||||| || || ||||||||||| |||||||  | ||| 
Sbjct: 1194 acaatctcatgaatcttatcactgacttcagggtcatctgatctcacagctaatttcatt 1135

                                            
Query: 243  gccacttctttcggcccgctgattccaaatga 274
            |||||||| || |||||||| | |||||||||
Sbjct: 1134 gccacttcgttgggcccgctcagtccaaatga 1103
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>emb|AL445593.3|CNS07ED3 Human chromosome 14 DNA sequence BAC C-2341M24 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 127155

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 115   caaatggaaagccaaaacaacaaaaa 140
             |||||||||||| |||||||||||||
Sbjct: 95927 caaatggaaagcaaaaacaacaaaaa 95952
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 119      tggaaagccaaaacaacaaaa 139
                |||||||||||||||||||||
Sbjct: 21750132 tggaaagccaaaacaacaaaa 21750112
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>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0429B05
          Length = 155024

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   tggaaagccaaaacaacaaaa 139
             |||||||||||||||||||||
Sbjct: 29715 tggaaagccaaaacaacaaaa 29695
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>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0479C12
          Length = 136799

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    tggaaagccaaaacaacaaaa 139
              |||||||||||||||||||||
Sbjct: 117702 tggaaagccaaaacaacaaaa 117682
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>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144,
             complete sequence
          Length = 135217

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   aaaacaacaaaaaggtcaaccaaaa 152
             |||||||||||||||||||| ||||
Sbjct: 66692 aaaacaacaaaaaggtcaacaaaaa 66716
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>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence
          Length = 198469

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    caaatgatagtctcaccaaa 287
              ||||||||||||||||||||
Sbjct: 134144 caaatgatagtctcaccaaa 134163
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>gb|AC073182.4| Homo sapiens BAC clone CTD-2012B24 from 7, complete sequence
          Length = 122912

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   caaatggaaagccaaaacaa 134
             ||||||||||||||||||||
Sbjct: 17294 caaatggaaagccaaaacaa 17275
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>emb|AL672014.10| Human DNA sequence from clone RP11-251P6 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 93520

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   ctttcaccaaatggaaagccaaaa 131
             ||||||||||||| ||||||||||
Sbjct: 12635 ctttcaccaaatgaaaagccaaaa 12658
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>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217690

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   aaaacaacaaaaaggtcaac 147
             ||||||||||||||||||||
Sbjct: 30996 aaaacaacaaaaaggtcaac 31015
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>emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 2/10
          Length = 313050

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 aagccaaaacaacaaaaagg 142
           ||||||||||||||||||||
Sbjct: 565 aagccaaaacaacaaaaagg 584
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>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE
          Length = 116729

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   aatggaaagccaaaacaacaaaaa 140
             |||||||| |||||||||||||||
Sbjct: 20452 aatggaaaaccaaaacaacaaaaa 20475
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>gb|AC079362.36| Homo sapiens 12 BAC RP11-754N21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 71854

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 113   accaaatggaaagccaaaacaacaaaaa 140
             ||||||||||||||||||| || |||||
Sbjct: 24865 accaaatggaaagccaaaaaaaaaaaaa 24838
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>gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, complete sequence
          Length = 181253

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 118    atggaaagccaaaacaacaaaaaggtcaaccaaaaa 153
              ||||||||| |||| || |||||||||||| |||||
Sbjct: 156807 atggaaagcaaaaaaaaaaaaaaggtcaactaaaaa 156842
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>dbj|AK031002.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830485N12 product:similar to Protein
           C20orf24 (Rab5-interacting protein) (RIP5) (PNAS-11)
           [Homo sapiens], full insert sequence
          Length = 2005

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 ccaaaacaacaaaaaggtca 145
           ||||||||||||||||||||
Sbjct: 906 ccaaaacaacaaaaaggtca 887
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>emb|AL929238.22| Mouse DNA sequence from clone RP23-480I16 on chromosome 2, complete
             sequence
          Length = 174226

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    agaaaaccaacttacacata 74
             ||||||||||||||||||||
Sbjct: 14949 agaaaaccaacttacacata 14968
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>gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complete sequence
          Length = 150646

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aacaacaaaaaggtcaacca 149
             ||||||||||||||||||||
Sbjct: 44400 aacaacaaaaaggtcaacca 44419
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>emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, complete sequence
          Length = 164218

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     ataattaatcgaaatccctt 104
              ||||||||||||||||||||
Sbjct: 160378 ataattaatcgaaatccctt 160359
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>emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 in linkage group 6,
             complete sequence
          Length = 181060

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   aaaacaacaaaaaggtcaac 147
             ||||||||||||||||||||
Sbjct: 24478 aaaacaacaaaaaggtcaac 24459
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>emb|AL806515.7| Mouse DNA sequence from clone RP23-434M18 on chromosome X, complete
              sequence
          Length = 125394

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     caagaatgatgctgcaacaa 38
              ||||||||||||||||||||
Sbjct: 115520 caagaatgatgctgcaacaa 115539
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>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6,
             complete sequence
          Length = 170067

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   aaaacaacaaaaaggtcaac 147
             ||||||||||||||||||||
Sbjct: 11246 aaaacaacaaaaaggtcaac 11265
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>emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on chromosome 2, complete
             sequence
          Length = 163240

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   ccaaaacaacaaaaaggtca 145
             ||||||||||||||||||||
Sbjct: 91724 ccaaaacaacaaaaaggtca 91705
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>emb|AL845468.4| Mouse DNA sequence from clone RP23-67E6 on chromosome 2, complete
             sequence
          Length = 217609

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    caagaatgatgctgcaacaa 38
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Sbjct: 48422 caagaatgatgctgcaacaa 48441


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,217,126
Number of Sequences: 3902068
Number of extensions: 3217126
Number of successful extensions: 67645
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67508
Number of HSP's gapped (non-prelim): 137
length of query: 294
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 272
effective length of database: 17,147,199,772
effective search space: 4664038337984
effective search space used: 4664038337984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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