>ref|XM_641632.1| Dictyostelium discoideum hypothetical protein (DDB0220519), partial
            mRNA
          Length = 2007

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 189  tgtcttatttttcttttacctt 210
            ||||||||||||||||||||||
Sbjct: 1313 tgtcttatttttcttttacctt 1292

>gb|AF026325.1|AF026325 Entamoeba dispar clone EDZP0148 EST, similar to putative ATPase
           subunit 6
          Length = 284

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 43  aatatttctcaattattattac 64
           ||||||||||||||||||||||
Sbjct: 258 aatatttctcaattattattac 279

>ref|XM_650495.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (26.t00065)
            partial mRNA
          Length = 2622

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 43   aatatttctcaattattattacaaa 67
            ||||||||||||||||| |||||||
Sbjct: 1462 aatatttctcaattattgttacaaa 1486

>gb|AC023301.5| Homo sapiens chromosome 18, clone RP11-713C5, complete sequence
          Length = 167190

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    aggaatgtcttatttttcttt 204
              |||||||||||||||||||||
Sbjct: 121810 aggaatgtcttatttttcttt 121790

>gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I,
             complete sequence
          Length = 106142

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    ctcaattattattacaaaaat 70
             |||||||||||||||||||||
Sbjct: 48797 ctcaattattattacaaaaat 48817

>gb|AC109925.4| Homo sapiens BAC clone RP11-398J16 from 4, complete sequence
          Length = 160855

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 41    gcaatatttctcaattattattaca 65
             ||||||||||| |||||||||||||
Sbjct: 68169 gcaatatttctaaattattattaca 68145

>gb|AC005375.4|AC005375 Homo sapiens chromosome 17, clone hRPK.388_F_14, complete sequence
          Length = 149030

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   gagcaggcagagtgctcatag 170
             |||||||||||||||||||||
Sbjct: 42841 gagcaggcagagtgctcatag 42821

>emb|AL954841.10| Zebrafish DNA sequence from clone DKEY-3B8, complete sequence
          Length = 149277

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 51    tcaattattattacaaaaatcagtc 75
             ||||||||||| |||||||||||||
Sbjct: 37108 tcaattattatcacaaaaatcagtc 37132

>ref|XM_636829.1| Dictyostelium discoideum hypothetical protein (DDB0206174), partial
            mRNA
          Length = 2484

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   aattattattacaaaaatca 72
            ||||||||||||||||||||
Sbjct: 1073 aattattattacaaaaatca 1092

>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence
          Length = 135091

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    agcaggcagagtgctcatag 170
              ||||||||||||||||||||
Sbjct: 114685 agcaggcagagtgctcatag 114704

>gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, complete sequence
          Length = 153145

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    agcaatatttctcaattattatta 63
             |||||||||||| |||||||||||
Sbjct: 99389 agcaatatttctaaattattatta 99366

>emb|AL109984.14|HSJ831D17 Human DNA sequence from clone RP5-831D17 on chromosome 20 Contains the 3'
              end of ZFP64 gene for  zinc finger protein 64 homolog
              (mouse), an endoplasmatic reticulum protein ERP29 (ERP31,
              ERP28) pseudogene and two CpG islands, complete sequence
          Length = 122764

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     agcaatatttctcaattatt 59
              ||||||||||||||||||||
Sbjct: 118513 agcaatatttctcaattatt 118494

>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    aatgtcttatttttctttta 206
              ||||||||||||||||||||
Sbjct: 937436 aatgtcttatttttctttta 937455

>emb|CR942276.1| Human DNA sequence from clone XX-NCIH2171_5AM21, complete sequence
          Length = 110743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    catcaccaacatttatgtgg 32
             ||||||||||||||||||||
Sbjct: 71237 catcaccaacatttatgtgg 71256



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    catcaccaacatttatgtgg 32
             ||||||||||||||||||||
Sbjct: 40029 catcaccaacatttatgtgg 40010

>gb|AC091096.7| Homo sapiens chromosome 8, clone RP11-587H10, complete sequence
          Length = 207630

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    aggaatgtcttatttttctt 203
              ||||||||||||||||||||
Sbjct: 194464 aggaatgtcttatttttctt 194445

>emb|BX571803.23| Zebrafish DNA sequence from clone DKEY-273G3 in linkage group 9, complete
              sequence
          Length = 241708

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    aatgtcttatttttctttta 206
              ||||||||||||||||||||
Sbjct: 120722 aatgtcttatttttctttta 120703

>gb|AC016883.14| Homo sapiens chromosome 8, clone RP11-327N12, complete sequence
          Length = 180682

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    catcaccaacatttatgtgg 32
             ||||||||||||||||||||
Sbjct: 86396 catcaccaacatttatgtgg 86415

>dbj|AK128734.1| Homo sapiens cDNA FLJ46902 fis, clone UTERU3023413
          Length = 3794

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   aaatcatcaccaacatttat 28
           ||||||||||||||||||||
Sbjct: 954 aaatcatcaccaacatttat 935

>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence
          Length = 119559

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   aatgtcttatttttctttta 206
             ||||||||||||||||||||
Sbjct: 68308 aatgtcttatttttctttta 68327

>gb|AC018714.4| Homo sapiens BAC clone RP11-382A18 from 8, complete sequence
          Length = 176760

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     catcaccaacatttatgtgg 32
              ||||||||||||||||||||
Sbjct: 169510 catcaccaacatttatgtgg 169529

>gb|AC093427.2| Homo sapiens chromosome 1 clone RP5-1080K5, complete sequence
          Length = 131877

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     aaatcatcaccaacatttat 28
             ||||||||||||||||||||
Sbjct: 18516 aaatcatcaccaacatttat 18497

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 181     agaaggaatgtcttattttt 200
               ||||||||||||||||||||
Sbjct: 3801047 agaaggaatgtcttattttt 3801066

>gb|AY275833.1| Homo sapiens polymerase (DNA directed), alpha (POLA) gene, complete cds
          Length = 304837

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tcaattattattacaaaaat 70
              ||||||||||||||||||||
Sbjct: 222102 tcaattattattacaaaaat 222083

>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence
          Length = 175021

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    agcaggcagagtgctcatag 170
              ||||||||||||||||||||
Sbjct: 162279 agcaggcagagtgctcatag 162260

>emb|BX323873.9| Zebrafish DNA sequence from clone CH211-133L21 in linkage group 19,
              complete sequence
          Length = 186708

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    aatgtcttatttttctttta 206
              ||||||||||||||||||||
Sbjct: 121510 aatgtcttatttttctttta 121491

>gb|AC022193.5|AC022193 Homo sapiens, clone RP11-23B3, complete sequence
          Length = 184228

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   aggaatgtcttatttttctt 203
             ||||||||||||||||||||
Sbjct: 97599 aggaatgtcttatttttctt 97618

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 347      aaaccatggcaatgcagatc 366
                ||||||||||||||||||||
Sbjct: 34127022 aaaccatggcaatgcagatc 34127041

>gb|AC147272.3| Pan troglodytes BAC clone RP43-116B9 from chromosome 7, complete
             sequence
          Length = 186339

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   ctcaggcagtgcagccgcaa 410
             ||||||||||||||||||||
Sbjct: 62385 ctcaggcagtgcagccgcaa 62366

>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    aaaccatggcaatgcagatc 366
              ||||||||||||||||||||
Sbjct: 123500 aaaccatggcaatgcagatc 123519

>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete
              sequence
          Length = 253132

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     atatttctcaattattatta 63
              ||||||||||||||||||||
Sbjct: 144860 atatttctcaattattatta 144879

>emb|BX648044.1|HSM808190 Homo sapiens mRNA; cDNA DKFZp686D02183 (from clone DKFZp686D02183)
          Length = 4795

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   aaatcatcaccaacatttat 28
           ||||||||||||||||||||
Sbjct: 267 aaatcatcaccaacatttat 248

>emb|BX248410.4| Zebrafish DNA sequence from clone DKEY-65M5 in linkage group 4, complete
              sequence
          Length = 250665

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     aattattattacaaaaatca 72
              ||||||||||||||||||||
Sbjct: 133300 aattattattacaaaaatca 133281

>emb|BX890602.8| Zebrafish DNA sequence from clone DKEYP-109H9 in linkage group 18,
             complete sequence
          Length = 191296

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     atgcaaatcatcaccaacatttat 28
             |||||||||||||||| |||||||
Sbjct: 50750 atgcaaatcatcaccatcatttat 50773

>dbj|AP005662.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1205G3, complete
             sequence
          Length = 108147

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    catcaccaacatttatgtgg 32
             ||||||||||||||||||||
Sbjct: 84737 catcaccaacatttatgtgg 84756

>emb|AL670771.6| Mouse DNA sequence from clone RP23-256C8 on chromosome X, complete
             sequence
          Length = 219340

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   gatggatgcttactttgaca 269
             ||||||||||||||||||||
Sbjct: 22027 gatggatgcttactttgaca 22008

>emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chromosome X, complete
             sequence
          Length = 211194

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tcaattattattacaaaaat 70
             ||||||||||||||||||||
Sbjct: 61229 tcaattattattacaaaaat 61248

>gb|AC135280.2| Homo sapiens X BAC RP11-136J1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 38108

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tcaattattattacaaaaat 70
             ||||||||||||||||||||
Sbjct: 22958 tcaattattattacaaaaat 22977


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,753,680
Number of Sequences: 3902068
Number of extensions: 3753680
Number of successful extensions: 78337
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78205
Number of HSP's gapped (non-prelim): 132
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)