Clone Name | rbastl50g04 |
---|---|
Clone Library Name | barley_pub |
>PPOX_MOUSE (P51175) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)| Length = 477 Score = 29.6 bits (65), Expect = 3.5 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +2 Query: 194 IRTPPSRRLAPAEASCTHQQALGHWQALQA 283 ++ PPS L +C Q +GHWQ L + Sbjct: 403 LKEPPSHCLVHLHKNCIPQYTIGHWQKLDS 432
>BMP5_HUMAN (P22003) Bone morphogenetic protein 5 precursor (BMP-5)| Length = 454 Score = 29.3 bits (64), Expect = 4.5 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = +1 Query: 79 SRVRYIFSPHFQPRRLKCT-TTRLT--DPAQAVLHDSFLASDSDSTLS 213 +R Y SP+ PRR++ + TT LT P A LHD+ +D+D +S Sbjct: 112 ARKGYPASPNGYPRRIQLSRTTPLTTQSPPLASLHDTNFLNDADMVMS 159
>BEX1_RAT (Q3MKQ2) Protein BEX1 (Brain-expressed X-linked protein 1 homolog)| (EG2RVC) Length = 128 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +3 Query: 6 SLAKFGSNNRQLHPKVREKQLHPKVTS*VYIFTTFSTTPPEMYHH 140 ++ +FG + RQL K+RE+QL + ST PP HH Sbjct: 84 NVQRFGEDMRQLMEKLRERQLS-------HSLRAVSTDPPHHDHH 121
>BEX2_RAT (Q3MKQ1) Protein BEX2 (Brain-expressed X-linked protein 2 homolog)| Length = 129 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +3 Query: 6 SLAKFGSNNRQLHPKVREKQLHPKVTS*VYIFTTFSTTPPEMYHH 140 ++ +FG + RQL K+RE+QL + ST PP HH Sbjct: 85 NVQRFGEDMRQLMEKLRERQLS-------HSLRAVSTDPPHHDHH 122
>HSP78_CANAL (Q96UX5) Heat shock protein 78, mitochondrial precursor| Length = 812 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/56 (25%), Positives = 26/56 (46%) Frame = +1 Query: 46 QKSGRNNYIQKSRVRYIFSPHFQPRRLKCTTTRLTDPAQAVLHDSFLASDSDSTLS 213 Q + +Y + SR++Y P Q + + + L + +LHDS + D +S Sbjct: 415 QATREGDYARASRIQYASIPELQDKIQELSKNELAAKSSNLLHDSVTSEDIAGVIS 470
>BEX1_MOUSE (Q9R224) Protein BEX1 (Brain-expressed X-linked protein 1 homolog)| (Reduced expression protein 3) (REX-3) Length = 128 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +3 Query: 6 SLAKFGSNNRQLHPKVREKQLHPKVTS*VYIFTTFSTTPPEMYHH 140 ++ +FG + RQL K+RE+QL + ST PP HH Sbjct: 84 NVQRFGGDVRQLMEKLRERQLS-------HSLRAVSTDPPHHDHH 121
>BEX2_MOUSE (Q9WTZ8) Protein BEX2 (Brain-expressed X-linked protein 2 homolog)| Length = 129 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +3 Query: 6 SLAKFGSNNRQLHPKVREKQLHPKVTS*VYIFTTFSTTPPEMYHH 140 ++ +FG + RQL K+RE+QL + ST PP HH Sbjct: 85 NVQRFGDDVRQLMEKLRERQLS-------HSLRAVSTDPPHHDHH 122
>EFG_GLOVI (Q7NEF2) Elongation factor G (EF-G)| Length = 707 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = -1 Query: 353 EDIFGAVLETA---AQAYGNDESIEVMLEELAND-PELADEYMKLLLAQVGE 210 ED +++ A YGND ++ +EE+ D EL EY L+ V E Sbjct: 184 EDTLSGIVDLVGMKAYVYGNDIGTDIRVEEIPADMEELVQEYRAKLIEAVSE 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,228,386 Number of Sequences: 219361 Number of extensions: 864360 Number of successful extensions: 2552 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2485 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2548 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)