ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478655.1| Oryza sativa (japonica cultivar-group), mRNA 149 5e-33
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 149 5e-33
3dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 149 5e-33
4ref|XM_478666.1| Oryza sativa (japonica cultivar-group), mRNA 66 6e-08
5ref|XM_478664.1| Oryza sativa (japonica cultivar-group), mRNA 66 6e-08
6gb|AF432503.1|AF432503 Oryza sativa cellulose synthase-like prot... 66 6e-08
7gb|AF432502.1|AF432502 Oryza sativa cellulose synthase-like prot... 66 6e-08
8gb|AF435651.1| Oryza sativa CSLF2 mRNA, partial cds 66 6e-08
9dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic D... 66 6e-08
10dbj|AK100523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 6e-08
11dbj|AK066835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 6e-08
12ref|XM_478669.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-07
13gb|AF432505.1|AF432505 Oryza sativa cellulose synthase-like prot... 64 2e-07
14gb|AF432504.1|AF432504 Oryza sativa cellulose synthase-like prot... 64 2e-07
15ref|NM_195879.1| Oryza sativa (japonica cultivar-group) putative... 52 9e-04
16gb|AY022882.1| Oryza sativa microsatellite MRG5207 containing (C... 52 9e-04
17gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome... 52 9e-04
18tpg|BK000091.1| TPA: TPA_exp: Oryza sativa cellulose synthase-li... 52 9e-04
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 9e-04
20dbj|AK110467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 9e-04
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 9e-04
22ref|XM_478656.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
23dbj|AK067424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.21
24ref|NM_185090.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.84
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.84
26emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 42 0.84
27gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 0.84
28emb|BX059064.1|CNS09HQK Single read from an extremity of a full-... 42 0.84
29emb|BX059063.1|CNS09HQJ Single read from an extremity of a full-... 42 0.84
30emb|BX043157.1|CNS095GP Single read from an extremity of a full-... 42 0.84
31emb|BX043156.1|CNS095GO Single read from an extremity of a full-... 42 0.84
32gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 42 0.84
33emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 42 0.84
34emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segmen... 42 0.84
35emb|AJ251793.1|BBR251793 Bordetella bronchiseptica bupI gene, bu... 42 0.84
36gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8 42 0.84
37gb|AC120498.2| Homo sapiens chromosome 16 clone RP11-616M22, com... 42 0.84
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
39gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 42 0.84
40gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 0.84
41dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 0.84
42ref|XM_311307.2| Anopheles gambiae str. PEST ENSANGP00000017454 ... 42 0.84
43dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.84
44emb|AL031711.30|HS333E1 Human DNA sequence from clone LA16-333E1... 42 0.84
45gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 3.3
46gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.3
47gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 3.3
48gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 3.3
49gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.3
50gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.3
51gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, com... 40 3.3
52gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 3.3
53gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence 40 3.3
54gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 3.3
55emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 40 3.3
56emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 3.3
57emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 3.3
58emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 3.3
59emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 3.3
60emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.3
61emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 3.3
62emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; s... 40 3.3
63emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 40 3.3
64emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A stra... 40 3.3
65dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, comp... 40 3.3
66gb|AE002098.2| Neisseria meningitidis MC58, complete genome 40 3.3
67dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
68gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, com... 40 3.3
69gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 3.3
70gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 3.3
71dbj|AB042603.1| Streptomyces coelicolor A3(2) plasmid SCP1 gene ... 40 3.3
72dbj|AB042601.1| Streptomyces coelicolor A3(2) gene for hypotheti... 40 3.3
73dbj|AB070351.1| Micrococcus luteus genes for TlyA homolog, poly(... 40 3.3 
>ref|XM_478655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2655

 Score =  149 bits (75), Expect = 5e-33
 Identities = 153/179 (85%)
 Strand = Plus / Minus

                                                                        
Query: 70   ggcctcttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatc 129
            ||||||||||||||   |||||| |||||||||||||||||||||||||||| ||| | |
Sbjct: 2486 ggcctcttgctccacctccccatgatcccgagcgcgaacgggtagagcagcaccaggacc 2427

                                                                        
Query: 130  cacacgttgaaaacaagcccgctcgccgcccccgcgacctgcgctgccgaccaccgccca 189
            ||||||||||| || |||||   || ||| || ||||||||||| | || ||||| ||| 
Sbjct: 2426 cacacgttgaacaccagccccgccgacgcgccggcgacctgcgccggcgtccaccccccg 2367

                                                                       
Query: 190  acgatcgccttgcccgccgccgcgccgatggcggccacgttcacggccatgaccaccac 248
            |||| |||||| |||||||||||||||||||| | ||||||||| ||||| ||||||||
Sbjct: 2366 acgaccgccttccccgccgccgcgccgatggcagtcacgttcaccgccatcaccaccac 2308
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  149 bits (75), Expect = 5e-33
 Identities = 153/179 (85%)
 Strand = Plus / Plus

                                                                            
Query: 70       ggcctcttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatc 129
                ||||||||||||||   |||||| |||||||||||||||||||||||||||| ||| | |
Sbjct: 21848233 ggcctcttgctccacctccccatgatcccgagcgcgaacgggtagagcagcaccaggacc 21848292

                                                                            
Query: 130      cacacgttgaaaacaagcccgctcgccgcccccgcgacctgcgctgccgaccaccgccca 189
                ||||||||||| || |||||   || ||| || ||||||||||| | || ||||| ||| 
Sbjct: 21848293 cacacgttgaacaccagccccgccgacgcgccggcgacctgcgccggcgtccaccccccg 21848352

                                                                           
Query: 190      acgatcgccttgcccgccgccgcgccgatggcggccacgttcacggccatgaccaccac 248
                |||| |||||| |||||||||||||||||||| | ||||||||| ||||| ||||||||
Sbjct: 21848353 acgaccgccttccccgccgccgcgccgatggcagtcacgttcaccgccatcaccaccac 21848411



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 96       cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
                ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 21938000 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 21937956



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 96       cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
                ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 21919428 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 21919384



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 85       tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
                |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 21952643 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 21952698



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 117      cagcagcagcatccacacgttgaaaacaagcccg 150
                ||||||||| |||||||||||||| || ||||||
Sbjct: 21857000 cagcagcaggatccacacgttgaataccagcccg 21857033
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score =  149 bits (75), Expect = 5e-33
 Identities = 153/179 (85%)
 Strand = Plus / Plus

                                                                         
Query: 70    ggcctcttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatc 129
             ||||||||||||||   |||||| |||||||||||||||||||||||||||| ||| | |
Sbjct: 61909 ggcctcttgctccacctccccatgatcccgagcgcgaacgggtagagcagcaccaggacc 61968

                                                                         
Query: 130   cacacgttgaaaacaagcccgctcgccgcccccgcgacctgcgctgccgaccaccgccca 189
             ||||||||||| || |||||   || ||| || ||||||||||| | || ||||| ||| 
Sbjct: 61969 cacacgttgaacaccagccccgccgacgcgccggcgacctgcgccggcgtccaccccccg 62028

                                                                        
Query: 190   acgatcgccttgcccgccgccgcgccgatggcggccacgttcacggccatgaccaccac 248
             |||| |||||| |||||||||||||||||||| | ||||||||| ||||| ||||||||
Sbjct: 62029 acgaccgccttccccgccgccgcgccgatggcagtcacgttcaccgccatcaccaccac 62087



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 96     cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
              ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 133104 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 133060



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 117   cagcagcagcatccacacgttgaaaacaagcccg 150
             ||||||||| |||||||||||||| || ||||||
Sbjct: 70676 cagcagcaggatccacacgttgaataccagcccg 70709
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>ref|XM_478666.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2583

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 96   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2406 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2362
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>ref|XM_478664.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2930

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 96   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2557 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2513
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>gb|AF432503.1|AF432503 Oryza sativa cellulose synthase-like protein OsCslF2 gene, complete
            cds
          Length = 3468

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 96   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2843 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2799
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>gb|AF432502.1|AF432502 Oryza sativa cellulose synthase-like protein OsCslF1 gene, complete
            cds
          Length = 3454

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 96   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2850 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2806
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>gb|AF435651.1| Oryza sativa CSLF2 mRNA, partial cds
          Length = 1567

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 96   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1199 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 1155
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>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0013G11
          Length = 151405

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 96    cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
             ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 30044 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 30000



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 96    cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
             ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 11472 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 11428



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 85    tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
             |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 44687 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 44742
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>dbj|AK100523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100P04, full
            insert sequence
          Length = 2929

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 96   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2556 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2512
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>dbj|AK066835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087I16, full
            insert sequence
          Length = 2430

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 96   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2076 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2032
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>ref|XM_478669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2694

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 85   tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
            |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 2534 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 2479
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>gb|AF432505.1|AF432505 Oryza sativa cellulose synthase-like protein OsCslF4 gene, complete cds
          Length = 13642

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 85    tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
             |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 13067 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 13012
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>gb|AF432504.1|AF432504 Oryza sativa cellulose synthase-like protein OsCslF3 gene, complete cds
          Length = 13642

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 85    tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 140
             |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 13067 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 13012
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>ref|NM_195879.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase
            D-like protein (OSJNBb0052C09.2), mRNA
          Length = 2493

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 75   cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 134
            |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 2403 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 2344

                  
Query: 135  gttgaa 140
            ||||||
Sbjct: 2343 gttgaa 2338
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>gb|AY022882.1| Oryza sativa microsatellite MRG5207 containing (CGG)X8, closest to
           marker C148, genomic sequence
          Length = 224

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 75  cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 134
           |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 204 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 145

                 
Query: 135 gttgaa 140
           ||||||
Sbjct: 144 gttgaa 139
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>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0052C09, complete sequence
          Length = 139468

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 75    cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 134
             |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 17944 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 18003

                   
Query: 135   gttgaa 140
             ||||||
Sbjct: 18004 gttgaa 18009
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>tpg|BK000091.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like F7 gene, complete
            cds
          Length = 11160

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 75   cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 134
            |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 8217 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 8158

                  
Query: 135  gttgaa 140
            ||||||
Sbjct: 8157 gttgaa 8152
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                           
Query: 75      cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 134
               |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 9665419 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 9665478

                     
Query: 135     gttgaa 140
               ||||||
Sbjct: 9665479 gttgaa 9665484
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>dbj|AK110467.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-G08, full
            insert sequence
          Length = 2729

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 75   cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 134
            |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 2441 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 2382

                  
Query: 135  gttgaa 140
            ||||||
Sbjct: 2381 gttgaa 2376
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                           
Query: 75      cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 134
               |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 9671458 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 9671517

                     
Query: 135     gttgaa 140
               ||||||
Sbjct: 9671518 gttgaa 9671523
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>ref|XM_478656.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2985

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 117  cagcagcagcatccacacgttgaaaacaagcccg 150
            ||||||||| |||||||||||||| || ||||||
Sbjct: 2632 cagcagcaggatccacacgttgaataccagcccg 2599
to top
>dbj|AK067424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107C16, full
            insert sequence
          Length = 2986

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 117  cagcagcagcatccacacgttgaaaacaagcccg 150
            ||||||||| |||||||||||||| || ||||||
Sbjct: 2632 cagcagcaggatccacacgttgaataccagcccg 2599
to top
>ref|NM_185090.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 691

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 200 tgcccgccgccgcgccgatgg 220
           |||||||||||||||||||||
Sbjct: 223 tgcccgccgccgcgccgatgg 203
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 200      tgcccgccgccgcgccgatgg 220
                |||||||||||||||||||||
Sbjct: 34587931 tgcccgccgccgcgccgatgg 34587951
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 208     gccgcgccgatggcggccacg 228
               |||||||||||||||||||||
Sbjct: 1696745 gccgcgccgatggcggccacg 1696725
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 199     ttgcccgccgccgcgccgatg 219
               |||||||||||||||||||||
Sbjct: 4029142 ttgcccgccgccgcgccgatg 4029162
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>emb|BX059064.1|CNS09HQK Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC39DA03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 975

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  ccgagcgcgaacgggtagagc 117
           |||||||||||||||||||||
Sbjct: 785 ccgagcgcgaacgggtagagc 805
to top
>emb|BX059063.1|CNS09HQJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC39DA03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 987

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 97  ccgagcgcgaacgggtagagc 117
           |||||||||||||||||||||
Sbjct: 154 ccgagcgcgaacgggtagagc 134
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>emb|BX043157.1|CNS095GP Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC15CC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 990

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  ccgagcgcgaacgggtagagc 117
           |||||||||||||||||||||
Sbjct: 804 ccgagcgcgaacgggtagagc 824
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>emb|BX043156.1|CNS095GO Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC15CC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1001

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 97  ccgagcgcgaacgggtagagc 117
           |||||||||||||||||||||
Sbjct: 162 ccgagcgcgaacgggtagagc 142
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>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
             sequence
          Length = 164236

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   tgcccgccgccgcgccgatgg 220
             |||||||||||||||||||||
Sbjct: 45648 tgcccgccgccgcgccgatgg 45668
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    cgccttgcccgccgccgcgcc 215
              |||||||||||||||||||||
Sbjct: 170845 cgccttgcccgccgccgcgcc 170865
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>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   cacggccatgaccaccacggt 251
             |||||||||||||||||||||
Sbjct: 40640 cacggccatgaccaccacggt 40660
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>emb|AJ251793.1|BBR251793 Bordetella bronchiseptica bupI gene, bupR gene and bfrZ gene
          Length = 5909

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 195 cgccttgcccgccgccgcgcc 215
           |||||||||||||||||||||
Sbjct: 532 cgccttgcccgccgccgcgcc 552
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>gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8
          Length = 265786

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 138    gaaaacaagcccgctcgccgccccc 162
              |||||||||||||||||||| ||||
Sbjct: 245860 gaaaacaagcccgctcgccggcccc 245836
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>gb|AC120498.2| Homo sapiens chromosome 16 clone RP11-616M22, complete sequence
          Length = 195680

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 138    gaaaacaagcccgctcgccgccccc 162
              |||||||||||||||||||| ||||
Sbjct: 189159 gaaaacaagcccgctcgccggcccc 189135
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 200      tgcccgccgccgcgccgatgg 220
                |||||||||||||||||||||
Sbjct: 34678003 tgcccgccgccgcgccgatgg 34678023
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>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
             sequence
          Length = 129302

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   tgcccgccgccgcgccgatgg 220
             |||||||||||||||||||||
Sbjct: 55402 tgcccgccgccgcgccgatgg 55382
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 205     gccgccgcgccgatggcggcc 225
               |||||||||||||||||||||
Sbjct: 3179187 gccgccgcgccgatggcggcc 3179167
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 203     ccgccgccgcgccgatggcgg 223
               |||||||||||||||||||||
Sbjct: 1688824 ccgccgccgcgccgatggcgg 1688804
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>ref|XM_311307.2| Anopheles gambiae str. PEST ENSANGP00000017454
           (ENSANGG00000014965), partial mRNA
          Length = 747

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 97  ccgagcgcgaacgggtagagc 117
           |||||||||||||||||||||
Sbjct: 566 ccgagcgcgaacgggtagagc 546
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>dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C02, full
           insert sequence
          Length = 827

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 200 tgcccgccgccgcgccgatgg 220
           |||||||||||||||||||||
Sbjct: 233 tgcccgccgccgcgccgatgg 213
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>emb|AL031711.30|HS333E1 Human DNA sequence from clone LA16-333E1 on chromosome 16, complete
             sequence
          Length = 39943

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 138   gaaaacaagcccgctcgccgccccc 162
             |||||||||||||||||||| ||||
Sbjct: 38778 gaaaacaagcccgctcgccggcccc 38754
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     cacggccatgaccaccacgg 250
               ||||||||||||||||||||
Sbjct: 3470630 cacggccatgaccaccacgg 3470649
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 201    gcccgccgccgcgccgatggcggc 224
              ||||||||||||||||||| ||||
Sbjct: 933739 gcccgccgccgcgccgatgccggc 933716
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ccgccgccgcgccgatggcg 222
               ||||||||||||||||||||
Sbjct: 1005367 ccgccgccgcgccgatggcg 1005386
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 206     ccgccgcgccgatggcggcc 225
               ||||||||||||||||||||
Sbjct: 2499812 ccgccgcgccgatggcggcc 2499831
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 201     gcccgccgccgcgccgatggcggc 224
               ||||||||||||||||||| ||||
Sbjct: 1976440 gcccgccgccgcgccgatgccggc 1976417
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   agcagcagcagcatccacac 134
             ||||||||||||||||||||
Sbjct: 48088 agcagcagcagcatccacac 48069
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>gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, complete sequence
          Length = 275200

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   agcagcagcagcatccacac 134
             ||||||||||||||||||||
Sbjct: 20343 agcagcagcagcatccacac 20324
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 198     cttgcccgccgccgcgccgatggcggcc 225
               ||||||||||||||||  ||||||||||
Sbjct: 2405077 cttgcccgccgccgcgtggatggcggcc 2405050
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>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence
          Length = 191669

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   agcagcagcagcatccacac 134
             ||||||||||||||||||||
Sbjct: 75325 agcagcagcagcatccacac 75344
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     cgccgcgccgatggcggcca 226
               ||||||||||||||||||||
Sbjct: 2587228 cgccgcgccgatggcggcca 2587247
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>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ccgccgccgcgccgatggcg 222
              ||||||||||||||||||||
Sbjct: 321082 ccgccgccgcgccgatggcg 321101
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    gcccgccgccgcgccgatgg 220
              ||||||||||||||||||||
Sbjct: 115261 gcccgccgccgcgccgatgg 115280
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   gcccgccgccgcgccgatgg 220
             ||||||||||||||||||||
Sbjct: 38323 gcccgccgccgcgccgatgg 38342
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    gcccgccgccgcgccgatgg 220
              ||||||||||||||||||||
Sbjct: 191077 gcccgccgccgcgccgatgg 191058
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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    gccttgcccgccgccgcgcc 215
              ||||||||||||||||||||
Sbjct: 255079 gccttgcccgccgccgcgcc 255098
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 201     gcccgccgccgcgccgatggcggc 224
               ||||||||||||||||||| ||||
Sbjct: 2400431 gcccgccgccgcgccgatgccggc 2400454
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ccgccgccgcgccgatggcg 222
             ||||||||||||||||||||
Sbjct: 18820 ccgccgccgcgccgatggcg 18839
to top
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2
          Length = 178073

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    cgccttgcccgccgccgcgc 214
              ||||||||||||||||||||
Sbjct: 138386 cgccttgcccgccgccgcgc 138367
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   cgccttgcccgccgccgcgc 214
             ||||||||||||||||||||
Sbjct: 39688 cgccttgcccgccgccgcgc 39707
to top
>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              1/7
          Length = 340806

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    gccgccgcgccgatggcggc 224
              ||||||||||||||||||||
Sbjct: 145584 gccgccgcgccgatggcggc 145603
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>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence
          Length = 271577

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ccccgcgagtgcgacgacac 20
             ||||||||||||||||||||
Sbjct: 52379 ccccgcgagtgcgacgacac 52360
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>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    gccgccgcgccgatggcggc 224
              ||||||||||||||||||||
Sbjct: 122732 gccgccgcgccgatggcggc 122713
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     agcagcagcagcatccacac 134
               ||||||||||||||||||||
Sbjct: 1386426 agcagcagcagcatccacac 1386407
to top
>gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, complete sequence
          Length = 165131

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    agcagcagcagcatccacac 134
              ||||||||||||||||||||
Sbjct: 112814 agcagcagcagcatccacac 112833
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 201     gcccgccgccgcgccgatggcggc 224
               ||||||||||||||||||| ||||
Sbjct: 3040380 gcccgccgccgcgccgatgccggc 3040403
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 207     cgccgcgccgatggcggcca 226
               ||||||||||||||||||||
Sbjct: 4209063 cgccgcgccgatggcggcca 4209044



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 201    gcccgccgccgcgccgatggcggc 224
              |||||||||||||||| |||||||
Sbjct: 112998 gcccgccgccgcgccgctggcggc 112975
to top
>dbj|AB042603.1| Streptomyces coelicolor A3(2) plasmid SCP1 gene for hypothetical
            protein, partial cds
          Length = 2068

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  cgccttgcccgccgccgcgc 214
            ||||||||||||||||||||
Sbjct: 1029 cgccttgcccgccgccgcgc 1010
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>dbj|AB042601.1| Streptomyces coelicolor A3(2) gene for hypothetical protein, IS468
            gene for transposase, IS468B gene, partial and complete
            cds
          Length = 2639

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  cgccttgcccgccgccgcgc 214
            ||||||||||||||||||||
Sbjct: 1029 cgccttgcccgccgccgcgc 1010
to top
>dbj|AB070351.1| Micrococcus luteus genes for TlyA homolog, poly(P)/ATP-NAD kinase
           and RecN homolog, partial and complete cds
          Length = 2497

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 202 cccgccgccgcgccgatggcggccacgt 229
           ||||| ||||||| ||||||||||||||
Sbjct: 964 cccgcggccgcgcggatggcggccacgt 937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,320,892
Number of Sequences: 3902068
Number of extensions: 2320892
Number of successful extensions: 73965
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71615
Number of HSP's gapped (non-prelim): 2350
length of query: 257
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 235
effective length of database: 17,147,199,772
effective search space: 4029591946420
effective search space used: 4029591946420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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