ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK098921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 2e-79
2dbj|AK067777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 2e-79
3dbj|AK060837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 2e-79
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 252 8e-64
5emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 252 8e-64
6gb|BT019203.1| Zea mays clone Contig876.F mRNA sequence 186 4e-44
7gb|BT018365.1| Zea mays clone EL01N0311E09.c mRNA sequence 186 4e-44
8gb|AY103815.1| Zea mays PCO096873 mRNA sequence 153 5e-34
9ref|NM_115399.2| Arabidopsis thaliana oxidoreductase, acting on ... 100 7e-18
10dbj|AK222082.1| Arabidopsis thaliana mRNA for 2-oxoglutarate deh... 100 7e-18
11gb|BT004643.1| Arabidopsis thaliana At3g55410 gene, complete cds 100 7e-18
12gb|BT013018.1| Lycopersicon esculentum clone 114256R, mRNA sequence 70 6e-09
13ref|XM_479634.1| Oryza sativa (japonica cultivar-group), mRNA 68 2e-08
14gb|BT018310.1| Zea mays clone EL01T0206H09.c mRNA sequence 68 2e-08
15dbj|AK100482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
16dbj|AK059174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
17gb|AY104202.1| Zea mays PCO125624 mRNA sequence 68 2e-08
18ref|NM_125972.3| Arabidopsis thaliana oxidoreductase, acting on ... 64 4e-07
19gb|AY096631.1| Arabidopsis thaliana putative 2-oxoglutarate dehy... 64 4e-07
20gb|AY074374.1| Arabidopsis thaliana putative 2-oxoglutarate dehy... 64 4e-07
21emb|AJ223802.1|ART223802 Arabidopsis thaliana mRNA for 2-oxoglut... 64 4e-07
22gb|AY111600.1| Zea mays CL6826_3 mRNA sequence 60 6e-06
23emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, B... 54 4e-04
24dbj|AP006099.1| Lotus japonicus genomic DNA, chromosome 5, clone... 54 4e-04
25gb|AY160679.1| Bartonella vinsonii subsp. berkhoffii alpha-ketog... 50 0.006
26emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BA... 46 0.088
27gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete se... 46 0.088
28dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.088
29dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.088
30dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.088
31emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome 42 1.4
32gb|AY491010.1| Leishmania major Hut1L protein (Hut1L) gene, comp... 40 5.4
33gb|AC121303.24| Mus musculus chromosome 8, clone RP23-335A5, com... 40 5.4
34gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, com... 40 5.4
35emb|AL590426.6| Human DNA sequence from clone RP11-354K4 on chro... 40 5.4
36emb|AL358216.33| Human DNA sequence from clone RP11-809C18 on ch... 40 5.4
37emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chr... 40 5.4
38gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, co... 40 5.4
39gb|AC116374.10| Mus musculus chromosome 1, clone RP23-294I9, com... 40 5.4
40dbj|AK130224.1| Homo sapiens cDNA FLJ26714 fis, clone PNC01043 40 5.4 
>dbj|AK098921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N21, full
            insert sequence
          Length = 3612

 Score =  303 bits (153), Expect = 2e-79
 Identities = 258/293 (88%)
 Strand = Plus / Minus

                                                                        
Query: 114  ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
            ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 3333 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 3274

                                                                        
Query: 174  gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcagatggggccctt 233
            |||||||||||||||||||| | ||| |||||||| || |||||||||||||||||||||
Sbjct: 3273 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 3214

                                                                        
Query: 234  ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
            || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 3213 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 3154

                                                                        
Query: 294  cggggattgatgtaggtatacgcccccatgttcatcggttcttcttggcaccaaacaatc 353
            || |||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 3153 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 3094

                                                                 
Query: 354  tcagcatttggatatctcttcagctcgcgctgaatgaggtcgtaggggaatgg 406
            || ||||||||||||| ||||| ||||||||| |||||||| || ||||||||
Sbjct: 3093 tcggcatttggatatcgcttcaactcgcgctggatgaggtcatatgggaatgg 3041



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gattattcaccaaatggctg 48
            ||||||||||||||||||||
Sbjct: 3415 gattattcaccaaatggctg 3396
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>dbj|AK067777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O03, full
            insert sequence
          Length = 3581

 Score =  303 bits (153), Expect = 2e-79
 Identities = 258/293 (88%)
 Strand = Plus / Minus

                                                                        
Query: 114  ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
            ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 3379 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 3320

                                                                        
Query: 174  gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcagatggggccctt 233
            |||||||||||||||||||| | ||| |||||||| || |||||||||||||||||||||
Sbjct: 3319 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 3260

                                                                        
Query: 234  ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
            || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 3259 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 3200

                                                                        
Query: 294  cggggattgatgtaggtatacgcccccatgttcatcggttcttcttggcaccaaacaatc 353
            || |||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 3199 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 3140

                                                                 
Query: 354  tcagcatttggatatctcttcagctcgcgctgaatgaggtcgtaggggaatgg 406
            || ||||||||||||| ||||| ||||||||| |||||||| || ||||||||
Sbjct: 3139 tcggcatttggatatcgcttcaactcgcgctggatgaggtcatatgggaatgg 3087



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gattattcaccaaatggctg 48
            ||||||||||||||||||||
Sbjct: 3461 gattattcaccaaatggctg 3442
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>dbj|AK060837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C11, full
            insert sequence
          Length = 1546

 Score =  303 bits (153), Expect = 2e-79
 Identities = 258/293 (88%)
 Strand = Plus / Minus

                                                                        
Query: 114  ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
            ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 1314 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 1255

                                                                        
Query: 174  gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcagatggggccctt 233
            |||||||||||||||||||| | ||| |||||||| || |||||||||||||||||||||
Sbjct: 1254 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 1195

                                                                        
Query: 234  ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
            || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 1194 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 1135

                                                                        
Query: 294  cggggattgatgtaggtatacgcccccatgttcatcggttcttcttggcaccaaacaatc 353
            || |||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1134 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 1075

                                                                 
Query: 354  tcagcatttggatatctcttcagctcgcgctgaatgaggtcgtaggggaatgg 406
            || ||||||||||||| ||||| ||||||||| |||||||| || ||||||||
Sbjct: 1074 tcggcatttggatatcgcttcaactcgcgctggatgaggtcatatgggaatgg 1022



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gattattcaccaaatggctg 48
            ||||||||||||||||||||
Sbjct: 1396 gattattcaccaaatggctg 1377
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  252 bits (127), Expect = 8e-64
 Identities = 217/247 (87%)
 Strand = Plus / Minus

                                                                            
Query: 114      ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
                ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 19193103 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 19193044

                                                                            
Query: 174      gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcagatggggccctt 233
                |||||||||||||||||||| | ||| |||||||| || |||||||||||||||||||||
Sbjct: 19193043 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 19192984

                                                                            
Query: 234      ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
                || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 19192983 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 19192924

                                                                            
Query: 294      cggggattgatgtaggtatacgcccccatgttcatcggttcttcttggcaccaaacaatc 353
                || |||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 19192923 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 19192864

                       
Query: 354      tcagcat 360
                || ||||
Sbjct: 19192863 tcggcat 19192857



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 29       gattattcaccaaatggctg 48
                ||||||||||||||||||||
Sbjct: 19193185 gattattcaccaaatggctg 19193166
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
              complete sequence
          Length = 151936

 Score =  252 bits (127), Expect = 8e-64
 Identities = 217/247 (87%)
 Strand = Plus / Minus

                                                                          
Query: 114    ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
              ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 126625 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 126566

                                                                          
Query: 174    gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcagatggggccctt 233
              |||||||||||||||||||| | ||| |||||||| || |||||||||||||||||||||
Sbjct: 126565 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 126506

                                                                          
Query: 234    ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
              || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 126505 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 126446

                                                                          
Query: 294    cggggattgatgtaggtatacgcccccatgttcatcggttcttcttggcaccaaacaatc 353
              || |||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 126445 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 126386

                     
Query: 354    tcagcat 360
              || ||||
Sbjct: 126385 tcggcat 126379



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     gattattcaccaaatggctg 48
              ||||||||||||||||||||
Sbjct: 126707 gattattcaccaaatggctg 126688
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>gb|BT019203.1| Zea mays clone Contig876.F mRNA sequence
          Length = 703

 Score =  186 bits (94), Expect = 4e-44
 Identities = 238/286 (83%)
 Strand = Plus / Minus

                                                                       
Query: 121 ttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcggtttgct 180
           |||| |||||| | |||||||||||  ||||||| ||||| | ||| ||||| || ||||
Sbjct: 468 ttcagaacgggtagttgatggggtcgcgctgcagggccttttgcaccagctccgtctgct 409

                                                                       
Query: 181 cctgcacatggacagtgtaaaaacctgtagctgtggctgcagatggggcccttccgacgt 240
           ||||||| || || | ||| || || ||||| || || || || |||||||| |||||||
Sbjct: 408 cctgcacgtgcaccgagtagaagcccgtagcagtagcagccgacggggccctgccgacgt 349

                                                                       
Query: 241 acttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagccggggat 300
           ||||||| || || ||||  ||||| || || ||| |||| || |||||||||||||  |
Sbjct: 348 acttgatgtcctcgatgccaccacggcccagagccttcattgccgtcagcagccgggcgt 289

                                                                       
Query: 301 tgatgtaggtatacgcccccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
           |||||||| | ||||| |||||||||||||| || || |||||||| || ||||||||||
Sbjct: 288 tgatgtagctgtacgctcccatgttcatcggctcctcctggcaccacacgatctcagcat 229

                                                         
Query: 361 ttggatatctcttcagctcgcgctgaatgaggtcgtaggggaatgg 406
           ||||||||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 228 ttggatatctcttcaactcgcgctggatgaggtcataggggaatgg 183
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>gb|BT018365.1| Zea mays clone EL01N0311E09.c mRNA sequence
          Length = 674

 Score =  186 bits (94), Expect = 4e-44
 Identities = 238/286 (83%)
 Strand = Plus / Minus

                                                                       
Query: 121 ttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcggtttgct 180
           |||| |||||| | |||||||||||  ||||||| ||||| | ||| ||||| || ||||
Sbjct: 470 ttcagaacgggtagttgatggggtcgcgctgcagggccttttgcaccagctccgtctgct 411

                                                                       
Query: 181 cctgcacatggacagtgtaaaaacctgtagctgtggctgcagatggggcccttccgacgt 240
           ||||||| || || | ||| || || ||||| || || || || |||||||| |||||||
Sbjct: 410 cctgcacgtgcaccgagtagaagcccgtagcagtagcagccgacggggccctgccgacgt 351

                                                                       
Query: 241 acttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagccggggat 300
           ||||||| || || ||||  ||||| || || ||| |||| || |||||||||||||  |
Sbjct: 350 acttgatgtcctcgatgccaccacggcccagagccttcattgccgtcagcagccgggcgt 291

                                                                       
Query: 301 tgatgtaggtatacgcccccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
           |||||||| | ||||| |||||||||||||| || || |||||||| || ||||||||||
Sbjct: 290 tgatgtagctgtacgctcccatgttcatcggctcctcctggcaccacacgatctcagcat 231

                                                         
Query: 361 ttggatatctcttcagctcgcgctgaatgaggtcgtaggggaatgg 406
           ||||||||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 230 ttggatatctcttcaactcgcgctggatgaggtcataggggaatgg 185
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>gb|AY103815.1| Zea mays PCO096873 mRNA sequence
          Length = 1431

 Score =  153 bits (77), Expect = 5e-34
 Identities = 221/269 (82%)
 Strand = Plus / Minus

                                                                        
Query: 135  ttgatggggtctggctgcagcgccttcttcacgagctcggtttgctcctgcacatggaca 194
            |||| ||||||  ||||||||||||||| ||| ||||| || ||||||||||| || || 
Sbjct: 1116 ttgagggggtcgcgctgcagcgccttctgcaccagctccgtctgctcctgcacgtgcacc 1057

                                                                        
Query: 195  gtgtaaaaacctgtagctgtggctgcagatggggcccttccgacgtacttgatatcatct 254
            | ||| || || || || || || || || |||||||| |||||||||||||| || || 
Sbjct: 1056 gagtagaagcccgtcgcggtagcagccgacggggccctgccgacgtacttgatgtcctcg 997

                                                                        
Query: 255  atgctgccacgaccgagcgccctcatcgcggtcagcagccggggattgatgtaggtatac 314
            ||||  || || || ||  || ||||||| ||||||| ||| || ||||||||| | || 
Sbjct: 996  atgccaccccggcccagaaccttcatcgccgtcagcaaccgcgggttgatgtagctgtat 937

                                                                        
Query: 315  gcccccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttc 374
            || |||||||||||||| || ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 936  gctcccatgttcatcggctcctcttggcaccacacgatctcggcatttggatatctcttc 877

                                         
Query: 375  agctcgcgctgaatgaggtcgtaggggaa 403
            | ||||||||| |||||||| ||||||||
Sbjct: 876  aactcgcgctggatgaggtcataggggaa 848
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>ref|NM_115399.2| Arabidopsis thaliana oxidoreductase, acting on the aldehyde or oxo
            group of donors, disulfide as acceptor / oxoglutarate
            dehydrogenase (succinyl-tra> AT3G55410 mRNA, complete cds
          Length = 3494

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
            |||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 3001 cccatgttcatcgcctcttcttggcaccaaacgatctccgcatttggatatctcttgagc 2942

                          
Query: 378  tcgcgctgaatgag 391
            || |||||||||||
Sbjct: 2941 tcacgctgaatgag 2928
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>dbj|AK222082.1| Arabidopsis thaliana mRNA for 2-oxoglutarate dehydrogenase, E1
           subunit - like protein, complete cds, clone:
           RAFL22-83-G07
          Length = 869

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                       
Query: 318 cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
           |||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 461 cccatgttcatcgcctcttcttggcaccaaacgatctccgcatttggatatctcttgagc 402

                         
Query: 378 tcgcgctgaatgag 391
           || |||||||||||
Sbjct: 401 tcacgctgaatgag 388
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>gb|BT004643.1| Arabidopsis thaliana At3g55410 gene, complete cds
          Length = 3054

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
            |||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 2867 cccatgttcatcgcctcttcttggcaccaaacgatctccgcatttggatatctcttgagc 2808

                          
Query: 378  tcgcgctgaatgag 391
            || |||||||||||
Sbjct: 2807 tcacgctgaatgag 2794
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>gb|BT013018.1| Lycopersicon esculentum clone 114256R, mRNA sequence
          Length = 3457

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttgg 364
            ||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 3020 cccatgttcattggctcttcttggcaccaaacaatctctgcatttgg 2974
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>ref|XM_479634.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3554

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
            ||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 3132 cccatattcatgggttcctcttggcaccagacaatctccgcatttggatatctttttagc 3073

              
Query: 378  tc 379
            ||
Sbjct: 3072 tc 3071
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>gb|BT018310.1| Zea mays clone EL01T0206H09.c mRNA sequence
          Length = 817

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 318 cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
           ||||||||||| || || || |||||||| |||||||| |||||||| ||||||||||||
Sbjct: 460 cccatgttcatgggctcctcctggcaccacacaatctccgcatttgggtatctcttcagc 401

             
Query: 378 tc 379
           ||
Sbjct: 400 tc 399



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 135 ttgatggggtctggctgcagcgccttcttcacgagctcggtttgctcctgcacatg 190
           ||||| || |||| |||||| ||||||||||| ||||| |  ||||||||| ||||
Sbjct: 643 ttgatcggctctgcctgcagtgccttcttcactagctctgactgctcctgcgcatg 588
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>dbj|AK100482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097A04, full
            insert sequence
          Length = 3554

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
            ||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 3132 cccatattcatgggttcctcttggcaccagacaatctccgcatttggatatctttttagc 3073

              
Query: 378  tc 379
            ||
Sbjct: 3072 tc 3071
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>dbj|AK059174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-F04, full
            insert sequence
          Length = 1789

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
            ||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 1324 cccatattcatgggttcctcttggcaccagacaatctccgcatttggatatctttttagc 1265

              
Query: 378  tc 379
            ||
Sbjct: 1264 tc 1263
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>gb|AY104202.1| Zea mays PCO125624 mRNA sequence
          Length = 1720

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatctcttcagc 377
            ||||||||||| || || || |||||||| |||||||| |||||||| ||||||||||||
Sbjct: 1362 cccatgttcatgggctcctcctggcaccacacaatctccgcatttgggtatctcttcagc 1303

              
Query: 378  tc 379
            ||
Sbjct: 1302 tc 1301



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 135  ttgatggggtctggctgcagcgccttcttcacgagctcggtttgctcctgcacatg 190
            ||||| || |||| |||||| ||||||||||| ||||| |  ||||||||| ||||
Sbjct: 1545 ttgatcggctctgcctgcagtgccttcttcactagctctgactgctcctgcgcatg 1490
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>ref|NM_125972.3| Arabidopsis thaliana oxidoreductase, acting on the aldehyde or oxo
            group of donors, disulfide as acceptor / oxoglutarate
            dehydrogenase (succinyl-tra> AT5G65750 mRNA, complete cds
          Length = 3461

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatc 369
            |||||||||||||| |||||||| ||||| || ||||| |||||||||||||
Sbjct: 3020 cccatgttcatcggctcttcttgacaccacacgatctctgcatttggatatc 2969
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>gb|AY096631.1| Arabidopsis thaliana putative 2-oxoglutarate dehydrogenase E1
            component (At5g65750) mRNA, complete cds
          Length = 3109

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatc 369
            |||||||||||||| |||||||| ||||| || ||||| |||||||||||||
Sbjct: 2879 cccatgttcatcggctcttcttgacaccacacgatctctgcatttggatatc 2828
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>gb|AY074374.1| Arabidopsis thaliana putative 2-oxoglutarate dehydrogenase E1
            component (At5g65750) mRNA, complete cds
          Length = 3450

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatc 369
            |||||||||||||| |||||||| ||||| || ||||| |||||||||||||
Sbjct: 2997 cccatgttcatcggctcttcttgacaccacacgatctctgcatttggatatc 2946
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>emb|AJ223802.1|ART223802 Arabidopsis thaliana mRNA for 2-oxoglutarate dehydrogenase E1 subunit
          Length = 3362

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 318  cccatgttcatcggttcttcttggcaccaaacaatctcagcatttggatatc 369
            |||||||||||||| |||||||| ||||| || ||||| |||||||||||||
Sbjct: 2968 cccatgttcatcggctcttcttgacaccacacgatctctgcatttggatatc 2917
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>gb|AY111600.1| Zea mays CL6826_3 mRNA sequence
          Length = 491

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 361 ttggatatctcttcagctcgcgctgaatgaggtcgtaggggaatgg 406
           ||||||||||||||| ||| ||||| |||||||| |||||||||||
Sbjct: 222 ttggatatctcttcaactcacgctggatgaggtcataggggaatgg 177
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>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
          Length = 103240

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 318   cccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
             |||||||||||||  ||||||||||||||||| ||||| ||||
Sbjct: 28015 cccatgttcatcgcctcttcttggcaccaaacgatctccgcat 27973



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 361   ttggatatctcttcagctcgcgctgaatgag 391
             ||||||||||||| ||||| |||||||||||
Sbjct: 27887 ttggatatctcttgagctcacgctgaatgag 27857
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>dbj|AP006099.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT03D07, TM0180a,
             complete sequence
          Length = 76444

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 318   cccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
             ||||||||||| || |||||||| |||||||||| ||||||||
Sbjct: 75857 cccatgttcattggctcttcttgacaccaaacaacctcagcat 75815
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>gb|AY160679.1| Bartonella vinsonii subsp. berkhoffii alpha-ketoglutarate
           dehydrogenase (sucA) gene, partial cds; dihydrolipoamide
           succinyltransferase (sucB) gene, complete cds; and
           dihydrolipoamide dehydrogenase (lpdA) gene, partial cds
          Length = 3357

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 315 gcccccatgttcatcggttcttcttggcaccaaacaa 351
           |||||||| ||| | ||||||||||||||||||||||
Sbjct: 669 gcccccatattctttggttcttcttggcaccaaacaa 633
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>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project)
          Length = 118086

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 318   cccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
             |||||||||||||| |||||||| ||||| || ||||| ||||
Sbjct: 59677 cccatgttcatcggctcttcttgacaccacacgatctctgcat 59719
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>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence
          Length = 114206

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 318    cccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
              ||||||||||| || |||||||| |||||||||| ||| ||||
Sbjct: 102020 cccatgttcattggctcttcttgacaccaaacaacctctgcat 102062
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 318      cccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
                ||||| ||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 29608419 cccatattcatgggttcctcttggcaccagacaatctccgcat 29608377
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>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0627E10
          Length = 163388

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 318    cccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
              ||||| ||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 135091 cccatattcatgggttcctcttggcaccagacaatctccgcat 135049
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>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24
          Length = 84440

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 318   cccatgttcatcggttcttcttggcaccaaacaatctcagcat 360
             |||||||||||||| |||||||| ||||| || ||||| ||||
Sbjct: 60130 cccatgttcatcggctcttcttgacaccacacgatctctgcat 60088
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>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome
          Length = 1581384

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 315     gcccccatgttcatcggttcttcttggcaccaaacaatctc 355
               |||||||||||  | || ||||| |||||||||||||||||
Sbjct: 1559969 gcccccatgttttttggctcttcctggcaccaaacaatctc 1560009
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>gb|AY491010.1| Leishmania major Hut1L protein (Hut1L) gene, complete cds
          Length = 1732

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   aacgcgcgcggtaccacaca 20
           ||||||||||||||||||||
Sbjct: 674 aacgcgcgcggtaccacaca 655
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>gb|AC121303.24| Mus musculus chromosome 8, clone RP23-335A5, complete sequence
          Length = 205158

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    ctgcacatggacagtgtaaaaacc 205
              |||||||| |||||||||||||||
Sbjct: 166554 ctgcacatagacagtgtaaaaacc 166577
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>gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, complete sequence
          Length = 203765

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   ctgtggctgcagatggggcc 230
             ||||||||||||||||||||
Sbjct: 32852 ctgtggctgcagatggggcc 32833
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>emb|AL590426.6| Human DNA sequence from clone RP11-354K4 on chromosome 6 Contains novel
              pseudogene, complete sequence
          Length = 204235

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     tcatggctatgcaaagaacc 114
              ||||||||||||||||||||
Sbjct: 122766 tcatggctatgcaaagaacc 122747
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>emb|AL358216.33| Human DNA sequence from clone RP11-809C18 on chromosome 10 Contains two
             novel genes, the gene for a novel protein (FLJ38694
             FLJ38681) and five CpG islands, complete sequence
          Length = 96891

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   gtggctgcagatggggccct 232
             ||||||||||||||||||||
Sbjct: 32127 gtggctgcagatggggccct 32146
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>emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chromosome 11, complete
             sequence
          Length = 101598

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    accaaatggctgtaatttag 56
             ||||||||||||||||||||
Sbjct: 78854 accaaatggctgtaatttag 78835
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>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence
          Length = 227950

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    catttggatatctcttcagc 377
              ||||||||||||||||||||
Sbjct: 160433 catttggatatctcttcagc 160452
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>gb|AC116374.10| Mus musculus chromosome 1, clone RP23-294I9, complete sequence
          Length = 179835

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   catttggatatctcttcagc 377
             ||||||||||||||||||||
Sbjct: 14135 catttggatatctcttcagc 14154
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>dbj|AK130224.1| Homo sapiens cDNA FLJ26714 fis, clone PNC01043
          Length = 1991

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 gtggctgcagatggggccct 232
           ||||||||||||||||||||
Sbjct: 910 gtggctgcagatggggccct 891


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,045,218
Number of Sequences: 3902068
Number of extensions: 3045218
Number of successful extensions: 54076
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53986
Number of HSP's gapped (non-prelim): 88
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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