Clone Name | rbastl50f06 |
---|---|
Clone Library Name | barley_pub |
>S6A18_HUMAN (Q96N87) Sodium- and chloride-dependent transporter XTRP2 (Solute| carrier family 6 member 18) Length = 628 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/59 (27%), Positives = 25/59 (42%) Frame = -3 Query: 179 IQRWCWSDEAIGQLCFVSYLHSTCIFPKENNVWDKCSHFWLG*IYSIHISLKFYMLMFV 3 + RW + G +C V +L +TC + N +WL + SL ML F+ Sbjct: 435 LPRWVPKEALTGLVCLVCFLSATCFTLQSGN-------YWLEIFDNFAASLNLLMLAFL 486
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -1 Query: 247 PPPHSHRITDIFSFRRSRPLYGSFKGGAG 161 P PH HRIT+ F RP +G K G Sbjct: 41 PHPHPHRITNFFIDNILRPEFGRRKEAGG 69
>YN60_YEAST (P42840) Hypothetical 32.3 kDa protein in KRE1-HXT14 intergenic| region Length = 284 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = -1 Query: 313 ILSIQIYGGLHASEYEK-IVHDVPPPHSHRITDIFSFRRSRPLYGSFKGGAGQMKL*DNF 137 I S + YG S EK + D SH TD F +R LYG GGA + + F Sbjct: 111 IYSYRGYGNSEGSPSEKGLKLDADCVISHLSTDSFHSKRKLVLYGRSLGGANALYIASKF 170
>YJU7_YEAST (P39526) Hypothetical 229.9 kDa protein in NUC1-NCE1 intergenic| region Length = 2014 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +2 Query: 206 EAEYISYSMRMRWRNIMNNLFVLRGMETTIDLYAKDLLFW 325 E++YISY + MR + T+ +LY K LL W Sbjct: 551 ESDYISYELIMRITVFSTSFIKNNTTSTSSNLYFKGLLCW 590
>LEPA_CHLCH (Q3ATB2) GTP-binding protein lepA| Length = 605 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -1 Query: 334 VGAPEKKILSIQIYGGLHASEY-EKIVHDVPPP 239 +G +IL++ G+ SE E IVH +PPP Sbjct: 159 MGVKRDEILAVSAKAGIGISELMESIVHRIPPP 191
>IF2P_THEVO (Q97BK4) Probable translation initiation factor IF-2| Length = 589 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -1 Query: 250 VPPPHSHRITDIFSFRRSRPLYGSFKGGAGQMKL*DNFV 134 +P P RI + FR S+P+ + GQ+K+ DN + Sbjct: 460 MPVPAKIRILPQYIFRASKPVIVGIRVETGQIKVGDNLI 498
>EFTS_BUCAI (P57326) Elongation factor Ts (EF-Ts)| Length = 268 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 251 IMNNLFVLRGMETTIDLYAKDLLFWCADLDIIIKEL 358 I NN+ V+ + D +KD LF C DI+++ L Sbjct: 67 IKNNIGVMLELNCETDFVSKDNLFICLGEDILVEAL 102
>TLK2_MOUSE (O55047) Serine/threonine-protein kinase tousled-like 2 (EC| 2.7.11.1) (Tousled-like kinase 2) Length = 718 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 241 PHSHRITDIFSFRRSRPLYG 182 P H+I+D F R +PLYG Sbjct: 79 PRGHKISDYFERRAEQPLYG 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,819,808 Number of Sequences: 219361 Number of extensions: 1001441 Number of successful extensions: 2030 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1991 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2030 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)