ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NAC1_BOVIN (P48765) Sodium/calcium exchanger 1 precursor (Na(+)/... 31 0.84
2NAC1_RAT (Q01728) Sodium/calcium exchanger 1 precursor (Na(+)/Ca... 30 1.9
3NAC2_RAT (P48768) Sodium/calcium exchanger 2 precursor (Na(+)/Ca... 30 1.9
4NAC2_HUMAN (Q9UPR5) Sodium/calcium exchanger 2 precursor (Na(+)/... 30 1.9
5NAC1_MOUSE (P70414) Sodium/calcium exchanger 1 precursor (Na(+)/... 30 1.9
6NAC1_FELCA (P48767) Sodium/calcium exchanger 1 precursor (Na(+)/... 30 1.9
7NAC1_CAVPO (P48766) Sodium/calcium exchanger 1 precursor (Na(+)/... 30 1.9
8NAC1_CANFA (P23685) Sodium/calcium exchanger 1 precursor (Na(+)/... 30 1.9
9VGF_HUMAN (O15240) Neurosecretory protein VGF precursor 30 1.9
10NAC1_HUMAN (P32418) Sodium/calcium exchanger 1 precursor (Na(+)/... 30 1.9
11SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7... 29 2.5
12SYPC_CANAL (P78600) Prolyl-tRNA synthetase, cytoplasmic (EC 6.1.... 28 4.2
13PRPF3_MOUSE (Q922U1) U4/U6 small nuclear ribonucleoprotein Prp3 ... 28 5.5
14PRPF3_HUMAN (O43395) U4/U6 small nuclear ribonucleoprotein Prp3 ... 28 5.5
15VGLM_PHV (P27315) Envelope polyprotein precursor (M polyprotein)... 28 7.2
16RPC6_MOUSE (Q921X6) DNA-directed RNA polymerase III 39 kDa polyp... 28 7.2
17FAB1_YEAST (P34756) 1-phosphatidylinositol-3-phosphate 5-kinase ... 28 7.2
18NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor (Na(+)/Ca... 27 9.3
19PT1_MYCPN (P75168) Phosphoenolpyruvate-protein phosphotransferas... 27 9.3
20YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738) 27 9.3
21CP17A_CAVPO (Q64410) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 27 9.3
22VGF_RAT (P20156) Neurosecretory protein VGF precursor (VGF8a pro... 27 9.3

>NAC1_BOVIN (P48765) Sodium/calcium exchanger 1 precursor|
           (Na(+)/Ca(2+)-exchange protein 1)
          Length = 970

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + TR E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 705 EHTRLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742



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>NAC1_RAT (Q01728) Sodium/calcium exchanger 1 precursor|
           (Na(+)/Ca(2+)-exchange protein 1)
          Length = 971

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + T+ E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 706 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 743



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>NAC2_RAT (P48768) Sodium/calcium exchanger 2 precursor|
           (Na(+)/Ca(2+)-exchange protein 2)
          Length = 921

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           +  R E I  +SY  KN+    I+K NL+ + G+  WR
Sbjct: 655 ENCRLEVIIEESYDFKNTVDKLIKKTNLALVIGTHSWR 692



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>NAC2_HUMAN (Q9UPR5) Sodium/calcium exchanger 2 precursor|
           (Na(+)/Ca(2+)-exchange protein 2)
          Length = 921

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           +  R E I  +SY  KN+    I+K NL+ + G+  WR
Sbjct: 655 ENCRLEVIIEESYDFKNTVDKLIKKTNLALVIGTHSWR 692



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>NAC1_MOUSE (P70414) Sodium/calcium exchanger 1 precursor|
           (Na(+)/Ca(2+)-exchange protein 1)
          Length = 970

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + T+ E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 705 EHTKLEVIIQESYEFKSTVDKLIKKTNLALVVGTNSWR 742



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>NAC1_FELCA (P48767) Sodium/calcium exchanger 1 precursor|
           (Na(+)/Ca(2+)-exchange protein 1)
          Length = 970

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + T+ E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 705 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742



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>NAC1_CAVPO (P48766) Sodium/calcium exchanger 1 precursor|
           (Na(+)/Ca(2+)-exchange protein 1)
          Length = 970

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + T+ E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 705 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742



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>NAC1_CANFA (P23685) Sodium/calcium exchanger 1 precursor|
           (Na(+)/Ca(2+)-exchange protein 1)
          Length = 970

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + T+ E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 705 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742



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>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor|
          Length = 616

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 300 PPSPLDDIPDCVRALPSWNRE 362
           PPS  D++PD    LP W+RE
Sbjct: 513 PPSARDELPDWNEVLPPWDRE 533



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>NAC1_HUMAN (P32418) Sodium/calcium exchanger 1 precursor|
           (Na(+)/Ca(2+)-exchange protein 1)
          Length = 973

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 46  QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + T+ E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 708 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 745



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>SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7.11.1)|
           (Protein kinase 18)
          Length = 982

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/70 (25%), Positives = 33/70 (47%)
 Frame = +1

Query: 79  SYQEKNSKQIQIRKLNLSFLTGSEPWRISNLWKKTSASKLLFPNGVLQNLMCSDMSTVCM 258
           +Y +KN + + I+K+N S     E W  +++ K+ S    +    ++    C    T C 
Sbjct: 47  AYDKKNEQTVAIKKMNFSGKQAVEKW--NDILKEVSFLNTVVHPHIVDYKACFLKDTTCW 104

Query: 259 LLLISTCSGS 288
           L++   C GS
Sbjct: 105 LVM-EYCIGS 113



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>SYPC_CANAL (P78600) Prolyl-tRNA synthetase, cytoplasmic (EC 6.1.1.15)|
           (Proline--tRNA ligase) (ProRS)
          Length = 575

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +1

Query: 103 QIQIRKLNLSFLTGSEPWRISNLWKKTSASKLL 201
           +IQ  +++LS ++  E W+++N W +    KL+
Sbjct: 73  EIQFEEVSLSLISHKELWKLTNRWDQEEIFKLV 105



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>PRPF3_MOUSE (Q922U1) U4/U6 small nuclear ribonucleoprotein Prp3|
           (Pre-mRNA-splicing factor 3)
          Length = 683

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 10  ECAHGPRSHNAKQKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEP 153
           E   GP S +    T+   +QIK   E  ++QI+ RK  LSF++   P
Sbjct: 124 EVIPGPPSESPGMLTK---LQIKQMMEAATRQIEERKKQLSFISPPAP 168



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>PRPF3_HUMAN (O43395) U4/U6 small nuclear ribonucleoprotein Prp3|
           (Pre-mRNA-splicing factor 3) (U4/U6 snRNP 90 kDa
           protein) (hPrp3)
          Length = 683

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 10  ECAHGPRSHNAKQKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEP 153
           E   GP S +    T+   +QIK   E  ++QI+ RK  LSF++   P
Sbjct: 124 EVIPGPPSESPGMLTK---LQIKQMMEAATRQIEERKKQLSFISPPTP 168



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>VGLM_PHV (P27315) Envelope polyprotein precursor (M polyprotein) [Contains:|
           Glycoprotein G1; Glycoprotein G2]
          Length = 1142

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 354 SMMEGLAHSPVCRLEVMGVHAW 289
           S+M G+AHS    L V G+H W
Sbjct: 467 SLMPGIAHSLAVELCVPGIHGW 488



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>RPC6_MOUSE (Q921X6) DNA-directed RNA polymerase III 39 kDa polypeptide (EC|
           2.7.7.6) (RNA polymerase III C39 subunit)
          Length = 316

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 58  FEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           F+F+Q K+   + SKQ  + + N SF +  E W+
Sbjct: 185 FKFLQSKAETARESKQNPVIQRNSSFASSHEVWK 218



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>FAB1_YEAST (P34756) 1-phosphatidylinositol-3-phosphate 5-kinase FAB1 (EC|
            2.7.1.150) (Phosphatidylinositol-3-phosphate 5-kinase)
            (Type III PIP kinase)
          Length = 2278

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +1

Query: 103  QIQIRKLNLSFLTGSEPWRISNLWKKTSASKLLFPNGVLQNLMCSDMSTVCMLLLISTCS 282
            +++I  L L F   S  W +S      S+S+ L   G       S  S   +  ++ST +
Sbjct: 1159 EMEIENLELEFQKRSRQWEVSY-----SSSQNLLGTG-------SHQSITVLYSMVSTKT 1206

Query: 283  GSPCVHP 303
             +PCV P
Sbjct: 1207 ATPCVGP 1213



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>NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor|
           (Na(+)/Ca(2+)-exchange protein 3)
          Length = 927

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 55  RFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEPWR 159
           + E I  +SY+ K++    I+K NL+ + G+  WR
Sbjct: 665 KLEVIIEESYEFKSTVDKLIKKTNLALVVGTHSWR 699



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>PT1_MYCPN (P75168) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 572

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 52  TRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSEP 153
           T F  +Q K +QE+ +  + +R+  L++LTG +P
Sbjct: 114 TMFSQMQDKYFQERAADILDLRQRLLAYLTGQKP 147



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>YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738)|
          Length = 1738

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 37   NAKQKTRFEFIQIKSYQEKNSKQ 105
            N+K KT+ EF   KS  +KN+KQ
Sbjct: 1271 NSKNKTKTEFFLNKSSSQKNNKQ 1293



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>CP17A_CAVPO (Q64410) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +1

Query: 127 LSFLTGSEPWRISNLWKKTSASKLLFPNGVLQNLMCSDMSTVCMLLLISTCSG 285
           ++F   S  W++      +S S        L+N++C ++S +C  L  +TC G
Sbjct: 112 IAFADSSATWQLHRRLVLSSFSLFRDGEQKLENIICQELSALCDFL--ATCDG 162



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>VGF_RAT (P20156) Neurosecretory protein VGF precursor (VGF8a protein)|
          Length = 617

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 300 PPSPL-DDIPDCVRALPSWNRE 362
           PP+P  D++PD    LP W+RE
Sbjct: 514 PPAPARDELPDWNEVLPPWDRE 535


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,913,716
Number of Sequences: 219361
Number of extensions: 958251
Number of successful extensions: 2189
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2188
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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