>QUEA_THIDN (Q30PZ7) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 342

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 53  RKSDGLSHVAFFDPSYILPPYQNNCLNFVLILV*NCTK-LKTLILGQF*DGGSISRQLSL 229
           R SD +SHV F+D    +P    NC      L+ N TK +K  + GQ   GG I   ++ 
Sbjct: 38  RASDEISHVHFYDFEKFIP---KNC-----ALIFNDTKVIKARLFGQKESGGKIELLINR 89

Query: 230 GSTSGAIH 253
              +  IH
Sbjct: 90  ALDAHNIH 97

>PYRD_LISIN (Q92AH5) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 304

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 216 GSFHLAARQVPFIQHAKKPLRARCSNNQEDYEHSICSTMPTQDRSGRGSALRAV 377
           G  H+ A ++PF++  + P+ A  +   ED    +CS      R G   A++A+
Sbjct: 77  GLEHVLAHELPFLEQFETPIIANVAGATEDDYVQVCS------RIGESKAVKAI 124

>XKR2_MOUSE (Q5GH68) XK-related protein 2 (X Kell blood group-related,|
           X-linked)
          Length = 449

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 270 PLRARCSNNQEDYEHSICSTMPTQDR 347
           PLR+  +NN  DY H IC   P  +R
Sbjct: 407 PLRSLFTNNVVDYLHCICCRRPRPER 432

>PUR4_NEIMB (Q9JXK5) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1320

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 237 RQVPFIQHAKKPLRARCSNNQEDYEHSI 320
           R+VP  +H   PL+  C+ +QE Y  SI
Sbjct: 528 REVPLEEHGLNPLQIWCNESQERYVLSI 555

>PUR4_NEIMA (Q9JWC5) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1320

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 237 RQVPFIQHAKKPLRARCSNNQEDYEHSI 320
           R+VP  +H   PL+  C+ +QE Y  SI
Sbjct: 528 REVPLEEHGLNPLQIWCNESQERYVLSI 555

>PYRD_LISMO (Q8Y667) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 304

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 216 GSFHLAARQVPFIQHAKKPLRARCSNNQEDYEHSICSTMPTQDRSGRGSALRAV 377
           G  H+ A ++PF++  + P+ A  +   ED    +C+      R G   A++A+
Sbjct: 77  GLEHVLAHELPFLEQFETPIIANVAGATEDDYVQVCA------RIGESKAVKAI 124

>PYRD_LISMF (Q71YI3) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 304

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 216 GSFHLAARQVPFIQHAKKPLRARCSNNQEDYEHSICSTMPTQDRSGRGSALRAV 377
           G  H+ A ++PF++  + P+ A  +   ED    +C+      R G   A++A+
Sbjct: 77  GLEHVLAHELPFLEQFETPIIANVAGATEDDYVQVCA------RIGESKAVKAI 124

>UL10_HCMVA (P16843) Hypothetical protein UL10|
          Length = 258

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = -1

Query: 318 WSAHNPPGCLSILHVRVSLHAE*MAPDVLPSESCRDMLPPS*NC--PKISVLSLV 160
           +  HN    LSILHV VS           P   CR   PP+ NC  P    LSL+
Sbjct: 100 YECHN--STLSILHVNVSD----------PKNYCRRKCPPNGNCEFPTCFTLSLI 142

>SP60_DICDI (P15270) Spore coat protein SP60 precursor|
          Length = 424

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 281 CT*GFLCMLNEWHLTCC-QVKAAVICSLR 198
           C  G  C ++EW   CC ++K   IC LR
Sbjct: 122 CPEGHECKVDEWGKECCVKIKCDDICDLR 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,858,078
Number of Sequences: 219361
Number of extensions: 984560
Number of successful extensions: 1815
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)