Clone Name | rbastl50e07 |
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Clone Library Name | barley_pub |
>BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain protein 1B| (Williams-Beuren syndrome chromosome region 9 protein) (WBRS9) (Williams syndrome transcription factor) (hWALP2) Length = 1483 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +1 Query: 199 LTATSTIKASQVKLPSSRRSLCRPGKKPHAQPCADTRSHHAASPPMLD 342 L TI+ +P + RS RPGKKPH+ TR +PP+ D Sbjct: 1282 LRPRKTIRGKHSVIPPAARSGRRPGKKPHS-----TRRSQPKAPPVDD 1324
>OBP_VZVD (P09299) Replication origin binding protein (OBP)| Length = 835 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +3 Query: 336 VRWMKLTHPGADANWQLPGPALYISPGT*NHSPV 437 V W+K THPG QL P I PG PV Sbjct: 29 VSWIKHTHPGISLELQLDVPVKLIKPGMSQTRPV 62
>PTLCB_STAHJ (Q4L869) PTS system lactose-specific EIICB component (EIICB-Lac)| (EII-Lac) [Includes: Lactose permease IIC component (PTS system lactose-specific EIIC component); Lactose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS sys Length = 583 Score = 30.0 bits (66), Expect = 3.2 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%) Frame = +2 Query: 152 NSVLNALILVYGGSTF*QLLAPSRPAKSNCQVPAGLYAGQGRNHMPSLVPTRALITPPRL 331 N N L+L GG T L A QVP AG HM + + +I P++ Sbjct: 478 NEQTNVLVLCAGGGTSGLLANALNKAAEEYQVPVKAAAGGYGAHMDIMKDYQLIILAPQV 537 Query: 332 RC*MDEANTSWGRRQLAASRTRSV---HLTRNLKS 427 ++ R + ++T+ V +LTR+ K+ Sbjct: 538 ASNYEDIKQDTDRLGIKLAKTQGVEYINLTRDGKA 572
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 29.3 bits (64), Expect = 5.4 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 20/108 (18%) Frame = +1 Query: 157 CSKCSYISLRREYILTAT------------STIKASQVKLPSSRRSLCRPGKKPHAQPCA 300 C++C L +Y+++ ST + S+ LPS+R P ++ P A Sbjct: 46 CARCIERGLACQYMVSKRMGRNPRAPSPLDSTRRPSE-SLPSARSEQGLPAHNTYSTPHA 104 Query: 301 DTRSH-HAASPPMLDG*S*-------HILGPTPTGSFPDPLCTSHQEP 420 T++H HA S P S H L PTP GS SHQ P Sbjct: 105 HTQAHTHAHSHPQPHPQSHPQSNQPPHAL-PTPNGSSSVSAIFSHQSP 151
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 29.3 bits (64), Expect = 5.4 Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 11/85 (12%) Frame = +1 Query: 205 ATSTIKASQVKLPSSRRSLCRPGKKPHA-QPCADTRSHHAASPPMLD----------G*S 351 AT+T+ + V+ P S RPG P QPC S P G Sbjct: 704 ATTTVDS--VQAPISSHMALRPGPAPAPPQPCFPVPQPVPQSVPQPQPLPTPYTYSIGTK 761 Query: 352 *HILGPTPTGSFPDPLCTSHQEPEI 426 H+ GP P FP + TS P I Sbjct: 762 QHLTGPLPQHHFPPGIPTSFPAPRI 786 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,498,404 Number of Sequences: 219361 Number of extensions: 1414987 Number of successful extensions: 2982 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2889 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2981 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)