ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl50e07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 155 bits (78), Expect = 2e-34 Identities = 84/86 (97%) Strand = Plus / Minus Query: 109 ctactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgc 168 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 150277 ctactccctctgtaaactaatataagagtgtttaaattactaaagtagtgttctaaatgc 150218 Query: 169 tcttatattagtttacggagggagta 194 |||||||||||||||||||||||||| Sbjct: 150217 tcttatattagtttacggagggagta 150192 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 109 ctactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgc 168 |||||||||| ||||||||||||||||| |||||| |||| |||| | |||| | Sbjct: 150191 ctactccctccgtaaactaatataagagcatttagaacactactttagtaatttaaacac 150250 Query: 169 tcttatattagtttacggagggagta 194 |||||||||||||||| ||||||||| Sbjct: 150251 tcttatattagtttacagagggagta 150276
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 153 bits (77), Expect = 6e-34 Identities = 83/85 (97%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 34510 tactccctctgtaaactaatataagagtgtttagattactaaagtagtattctaaatgct 34569 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||||||||||||| Sbjct: 34570 cttatattagtttacggagggagta 34594 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||||||||||||||| |||||| ||||| |||| |||||| || Sbjct: 34594 tactccctccgtaaactaatataagagcatttagaatactactttagtaatctaaacact 34535 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||| ||||||||| Sbjct: 34534 cttatattagtttacagagggagta 34510
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene, nuclear gene encoding plastid protein, partial cds Length = 9285 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 6466 tactccctctgtaaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 6407 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||||||||||||| Sbjct: 6406 cttatattagtttacggagggagta 6382 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 108 actactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatg 167 ||||||||||| ||||||||||||||||| ||||||| |||| ||||| |||||| Sbjct: 6380 actactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaaca 6439 Query: 168 ctcttatattagtttacggagggagtacatt 198 |||||||||| |||||| ||||||||||||| Sbjct: 6440 ctcttatattggtttacagagggagtacatt 6470
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons 1-3 Length = 2155 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Minus Query: 108 actactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatg 167 ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 1340 actactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatg 1281 Query: 168 ctcttatattagtttacggagggagtac 195 || |||||||||||||| | |||||||| Sbjct: 1280 cttttatattagtttacagggggagtac 1253 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||| |||||||||||||||| || |||||| |||| |||| |||||| ||| Sbjct: 1254 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 1313 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||| ||||||||| Sbjct: 1314 cttatattagtttacagagggagta 1338
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 108 actactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatg 167 ||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||| | Sbjct: 1475 actactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacg 1416 Query: 168 ctcttatattagtttacggagggagtac 195 ||||||||||||||||| |||||||||| Sbjct: 1415 ctcttatattagtttacagagggagtac 1388 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||||||||||||||| |||||||| |||| |||| ||||||| ||| Sbjct: 1389 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 1448 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||||||||||||| Sbjct: 1449 cttatattagtttacggagggagta 1473
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||| Sbjct: 6317 tactccctctgtaaactaatataagagtgtttagatcactactttagtgatctaaacgct 6376 Query: 170 cttatattagtttacggagggagtac 195 |||||||||||||||||||||||||| Sbjct: 6377 cttatattagtttacggagggagtac 6402 Score = 107 bits (54), Expect = 3e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||||||||||||||| |||||||| |||||| ||||| |||||| || Sbjct: 6401 tactccctccgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacact 6342 Query: 170 cttatattagtttacggagggagtac 195 ||||||||||||||| |||||||||| Sbjct: 6341 cttatattagtttacagagggagtac 6316
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||| Sbjct: 2795 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 2736 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||||||||||||| Sbjct: 2735 cttatattagtttacggagggagta 2711 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 2711 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 2770 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||| ||||||||| Sbjct: 2771 cttatattagtttacagagggagta 2795
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA, complete cds Length = 975 Score = 119 bits (60), Expect = 9e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||| || ||||||| |||||| |||||||||||| || Sbjct: 640 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 699 Query: 170 cttatattagtttacggagggagtacat 197 |||||||||||||||||||||||||||| Sbjct: 700 cttatattagtttacggagggagtacat 727 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 724 tactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgct 665 Query: 170 cttatattagtttacggagggagta 194 |||||||||||||| ||||||||| Sbjct: 664 tttatattagtttacagagggagta 640
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene, complete cds Length = 1003 Score = 119 bits (60), Expect = 9e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||| || ||||||| |||||| |||||||||||| || Sbjct: 732 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 791 Query: 170 cttatattagtttacggagggagtacat 197 |||||||||||||||||||||||||||| Sbjct: 792 cttatattagtttacggagggagtacat 819 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 816 tactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgct 757 Query: 170 cttatattagtttacggagggagta 194 |||||||||||||| ||||||||| Sbjct: 756 tttatattagtttacagagggagta 732
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA, complete cds Length = 1151 Score = 119 bits (60), Expect = 9e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||| || ||||||| |||||| |||||||||||| || Sbjct: 630 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 689 Query: 170 cttatattagtttacggagggagtacat 197 |||||||||||||||||||||||||||| Sbjct: 690 cttatattagtttacggagggagtacat 717 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 714 tactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgct 655 Query: 170 cttatattagtttacggagggagta 194 |||||||||||||| ||||||||| Sbjct: 654 tttatattagtttacagagggagta 630
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||||||||||||||||| |||||| | |||||||||| |||||||| | Sbjct: 200988 tactccatctgtaaactaatataagagtgcttagataagtaaaatagtgatctaaatgtt 201047 Query: 170 cttatattagtttacggagggagta 194 |||||||||||||||||||||||| Sbjct: 201048 tttatattagtttacggagggagta 201072 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| |||||| ||||| |||||| | |||| Sbjct: 29821 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 29762 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 29761 atattagtttacagagggagtaca 29738 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| |||| ||||| |||||| | | Sbjct: 29740 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 29799 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 29800 cttatattagtttacagaggga 29821 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataa 133 ||||||||| |||||||||||||| Sbjct: 201072 tactccctccgtaaactaatataa 201049 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ctcttatattagtttacggagggagtac 195 ||||||||||||||||| || ||||||| Sbjct: 201014 ctcttatattagtttacagatggagtac 200987
>gb|AY553258.1| Hordeum marinum isolate Hor_mar phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 839 Score = 113 bits (57), Expect = 5e-22 Identities = 81/88 (92%), Gaps = 2/88 (2%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgttta--gattactaaaatagtgttctaaatg 167 |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 489 tactccctttgtaaactaatataaaagtgtttatagattactaaaatagtgttctaaatg 548 Query: 168 ctcttatattagtttacggagggagtac 195 ||| |||||| ||||||||||| ||||| Sbjct: 549 ctcgtatattggtttacggaggaagtac 576
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 111 actccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctc 170 |||||||| ||||||||||||||||| |||||||| |||||||||||| || ||| ||| Sbjct: 745 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 804 Query: 171 ttatattagtttacggagggagtac 195 |||||||| |||||||||||||||| Sbjct: 805 ttatattaatttacggagggagtac 829 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||| |||||||||||||||| ||| |||| ||||| |||||| ||| Sbjct: 828 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 769 Query: 170 cttatattagtttacggagggagt 193 ||||||||||||||| |||||||| Sbjct: 768 cttatattagtttactgagggagt 745 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagt 157 ||||||||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 8829 tactccctctgtaaagaaatataagatcgtttagatcactaaaatagt 8876
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||||||||||||||| |||||||| |||||| ||||| |||||| ||| Sbjct: 7619 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 7560 Query: 170 cttatattagtt 181 |||||||||||| Sbjct: 7559 cttatattagtt 7548 Score = 81.8 bits (41), Expect = 2e-12 Identities = 75/85 (88%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||| ||| |||||||||||||| |||||||| |||| ||||| |||||| ||| Sbjct: 7536 tactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaacgct 7594 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||||| ||||||||| Sbjct: 7595 cttatattagtttacagagggagta 7619
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription factor, complete cds Length = 941 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 108 actactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatg 167 ||||||||||| ||||||||||||||||| |||| || | |||||||||| |||||| Sbjct: 736 actactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaaca 795 Query: 168 ctcttatattagtttacggagggagta 194 ||||||||||||||||||||||||||| Sbjct: 796 ctcttatattagtttacggagggagta 822 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 109 ctactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgc 168 |||||||||| |||||||||||||||||||||||||| |||| || || | ||||||| Sbjct: 823 ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 764 Query: 169 tcttatattagtttacggagggagta 194 |||||||||||||||| ||||||||| Sbjct: 763 tcttatattagtttaccgagggagta 738
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 109 ctactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgc 168 ||||||| ||||||||||| |||||||| |||||||| |||||| |||| |||||| || Sbjct: 2896 ctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgc 2837 Query: 169 tcttatattagtttacggagggagta 194 |||||||||| ||||||||||||||| Sbjct: 2836 tcttatattaatttacggagggagta 2811 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||| ||||||||||| ||||||||||||| ||||| |||||| ||| Sbjct: 2811 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 2870 Query: 170 cttatattagtttacggagggagta 194 |||||| |||||||| || |||||| Sbjct: 2871 cttatagtagtttacagacggagta 2895
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 109 ctactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgc 168 ||||||| ||||||||||| |||||||| |||||||| |||||| |||| |||||| || Sbjct: 1652 ctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgc 1593 Query: 169 tcttatattagtttacggagggagta 194 |||||||||| ||||||||||||||| Sbjct: 1592 tcttatattaatttacggagggagta 1567 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||| ||||| ||||||||||| ||||||||||||| ||||| |||||| ||| Sbjct: 1567 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 1626 Query: 170 cttatattagtttacggagggagta 194 |||||| |||||||| || |||||| Sbjct: 1627 cttatagtagtttacagacggagta 1651
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| | Sbjct: 884 tactccatctgtaaactaatataaaagcgtttagattactaaagtagtgttctaaatgtt 943 Query: 170 cttatatta 178 ||||||||| Sbjct: 944 cttatatta 952
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| | Sbjct: 884 tactccatctgtaaactaatataaaagcgtttagattactaaagtagtgttctaaatgtt 943 Query: 170 cttatatta 178 ||||||||| Sbjct: 944 cttatatta 952
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial cds Length = 1438 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| |||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 254 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 255 atattagtttacagagggagtaca 278 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| |||| ||||| |||||| | | Sbjct: 276 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 |||||| ||||||||||||||||| ||||||| ||||||| || || |||||||||| || Sbjct: 103669 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 103728 Query: 173 atattagtttacggagggagtac 195 |||||||||||| ||||||||| Sbjct: 103729 atattagtttacaaagggagtac 103751 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||| ||||||||||||||| || ||||||| | || |||| ||||||| ||| Sbjct: 103750 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 103691 Query: 170 cttatattagtttacggaggga 191 |||||||||||||||||||||| Sbjct: 103690 cttatattagtttacggaggga 103669
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 108 actactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatg 167 |||| ||||| |||||||||||||||||| ||| |||| | |||||| ||| |||||| Sbjct: 177746 actattccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaact 177687 Query: 168 ctcttatattagtttacggagggagt 193 |||||||||||||||||||||||||| Sbjct: 177686 ctcttatattagtttacggagggagt 177661 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 111 actccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctc 170 |||||||| ||||||||||||||||| |||||||| || | || || ||| || |||| Sbjct: 177661 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 177720 Query: 171 ttatattagtttac 184 |||||||||||||| Sbjct: 177721 ttatattagtttac 177734
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||| ||||||||| |||||||||||||| | Sbjct: 10709 tactccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtt 10768 Query: 170 cttatatta 178 ||||||||| Sbjct: 10769 cttatatta 10777
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||| ||||||||| |||||||||||||| | Sbjct: 62430 tactccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtt 62489 Query: 170 cttatatta 178 ||||||||| Sbjct: 62490 cttatatta 62498
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||| ||||||||| |||||||||||||| | Sbjct: 11479 tactccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtt 11538 Query: 170 cttatatta 178 ||||||||| Sbjct: 11539 cttatatta 11547
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 89.7 bits (45), Expect = 8e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||| |||||||||| |||||||| |||||| ||||| |||||| ||| Sbjct: 21653 tactccctctgtaaataaatataagagcgtttagatcactaaagtagtgatctaaacgct 21712 Query: 170 cttatattagtttacggagggagta 194 |||||||| ||||| ||||||||| Sbjct: 21713 cttatatttctttacagagggagta 21737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 109 ctactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgc 168 |||||||||||||||| |||||||||| |||||||| |||| ||||| |||||| || Sbjct: 21738 ctactccctctgtaaagaaatataagagcgtttagatcactactttagtgatctaaacgc 21679 Query: 169 tcttatattagtttacggagggagta 194 ||||||||| ||||| ||||||||| Sbjct: 21678 tcttatatttatttacagagggagta 21653
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 885 tactccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgtt 944 Query: 170 cttatatta 178 ||||||||| Sbjct: 945 cttatatta 953
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 885 tactccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgtt 944 Query: 170 cttatatta 178 ||||||||| Sbjct: 945 cttatatta 953
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 885 tactccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgtt 944 Query: 170 cttatatta 178 ||||||||| Sbjct: 945 cttatatta 953
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| | Sbjct: 884 tactccatctgtaaactaatataaaagcgtttagattactaaagtagtgttctaaatgtt 943 Query: 170 cttatatta 178 |||||||| Sbjct: 944 tttatatta 952
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||| ||||||||| |||||||||||||| | Sbjct: 884 tactccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtt 943 Query: 170 cttatatta 178 ||||||||| Sbjct: 944 cttatatta 952
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 115 cctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttat 174 ||||||||||||||||||| || ||||||| | ||| ||||| ||||||||||||||| Sbjct: 536 cctctgtaaactaatataaaagcatttagatcattaag-tagtgatctaaatgctcttat 594 Query: 175 attagtttacggagggagta 194 |||||||||||||||||||| Sbjct: 595 attagtttacggagggagta 614 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 108 actactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatg 167 ||||||||||| ||||||||||||||||| ||||||| ||| | || || |||||||| Sbjct: 616 actactccctccgtaaactaatataagagcatttagatcact-acttaatgatctaaatg 558 Query: 168 ctcttatattagtttacggagg 189 || |||||||||||||| |||| Sbjct: 557 cttttatattagtttacagagg 536
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene, partial cds Length = 1439 Score = 87.7 bits (44), Expect = 3e-14 Identities = 75/84 (89%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| |||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaag-tctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 75.8 bits (38), Expect = 1e-10 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| | ||||||| |||| ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagact-tttagatcactactttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA, complete cds Length = 800 Score = 87.7 bits (44), Expect = 3e-14 Identities = 78/88 (88%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 108 actactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatg 167 ||||||||||| ||||||||||||||||| |||| || | |||||||||| |||||| Sbjct: 693 actactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaaca 752 Query: 168 ctcttatatt-agtttacggagggagta 194 |||||||||| ||||||||||||||||| Sbjct: 753 ctcttatattaagtttacggagggagta 780 Score = 85.7 bits (43), Expect = 1e-13 Identities = 77/87 (88%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 109 ctactccctctgtaaact-aatataagagtgtttagattactaaaatagtgttctaaatg 167 |||||||||| ||||||| ||||||||||||||||||| |||| || || | |||||| Sbjct: 781 ctactccctccgtaaacttaatataagagtgtttagatcactattttaatgatttaaatg 722 Query: 168 ctcttatattagtttacggagggagta 194 ||||||||||||||||| ||||||||| Sbjct: 721 ctcttatattagtttaccgagggagta 695
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds Length = 9585 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/84 (88%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattac--taaaatagtgttctaaatg 167 ||||||||| ||||| ||||||||||||||||| ||||| |||| ||||| |||||||| Sbjct: 9246 tactccctccgtaaattaatataagagtgtttaaattactataaagtagtgatctaaatg 9187 Query: 168 ctcttatattagtttacggaggga 191 || |||||||| |||||| ||||| Sbjct: 9186 cttttatattaatttacgaaggga 9163 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 168 ctcttatattagtttacggagggagtac 195 ||||||||||| |||||||||||||||| Sbjct: 9220 ctcttatattaatttacggagggagtac 9247
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||| |||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 16690 tactccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtt 16749 Query: 170 cttatatta 178 ||||||||| Sbjct: 16750 cttatatta 16758
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||| ||||||||| |||||||||||||| | Sbjct: 837 tactccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtt 896 Query: 170 cttatatta 178 |||||||| Sbjct: 897 tttatatta 905
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||| |||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 883 tactccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtt 942 Query: 170 cttatatta 178 ||||||||| Sbjct: 943 cttatatta 951
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 884 tactccatctgtaaactaatataaaagcgtttagattactaaagtagtgttttaaatgtt 943 Query: 170 cttatatta 178 |||||||| Sbjct: 944 tttatatta 952
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||| |||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 883 tactccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtt 942 Query: 170 cttatatta 178 ||||||||| Sbjct: 943 cttatatta 951
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||| |||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 883 tactccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtt 942 Query: 170 cttatatta 178 ||||||||| Sbjct: 943 cttatatta 951
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||| ||||||||| |||||||||||||| | Sbjct: 884 tactccatctgtaaactaatataaaagcgtttaaattactaaagtagtgttctaaatgtt 943 Query: 170 cttatatta 178 |||||||| Sbjct: 944 tttatatta 952
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||| |||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 883 tactccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtt 942 Query: 170 cttatatta 178 ||||||||| Sbjct: 943 cttatatta 951
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||| |||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 883 tactccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtt 942 Query: 170 cttatatta 178 ||||||||| Sbjct: 943 cttatatta 951
>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds Length = 4768 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 1109 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 1167 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 1168 atattagtttacagagggagtaca 1191 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 1189 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 1131 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 1130 cttatattagtttacagaggga 1109
>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial cds Length = 1437 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein (rga2) gene, partial cds Length = 1436 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene, partial cds Length = 1438 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial cds Length = 1435 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial cds Length = 1438 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial cds Length = 1437 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene, partial cds Length = 1437 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 194 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 252 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 253 atattagtttacagagggagtaca 276 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 274 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 216 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 215 cttatattagtttacagaggga 194
>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial cds Length = 1436 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 194 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 252 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 253 atattagtttacagagggagtaca 276 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 274 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 216 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 215 cttatattagtttacagaggga 194
>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial cds Length = 1437 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 253 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtaca 277 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 275 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 217 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 216 cttatattagtttacagaggga 195
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 79.8 bits (40), Expect = 7e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctctt 172 ||||||||||||||||||||||| ||||||| ||||| ||||| |||||| | |||| Sbjct: 47575 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 47517 Query: 173 atattagtttacggagggagtaca 196 |||||||||||| ||||||||||| Sbjct: 47516 atattagtttacagagggagtaca 47493 Score = 67.9 bits (34), Expect = 3e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||||||||||||||||||| ||||||| ||| | ||||| |||||| | | Sbjct: 47495 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 47553 Query: 170 cttatattagtttacggaggga 191 ||||||||||||||| |||||| Sbjct: 47554 cttatattagtttacagaggga 47575
>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein (rga2) gene, partial cds Length = 1441 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/86 (87%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattactaa--aatagtgttctaaatgctc 170 ||||||||||||||||||||||| ||||||| ||||| | ||||| |||||| | || Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 254 Query: 171 ttatattagtttacggagggagtaca 196 |||||||||||||| ||||||||||| Sbjct: 255 ttatattagtttacagagggagtaca 280 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/84 (85%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattacta--aaatagtgttctaaatg 167 |||||||||||||||||||||||||| ||||||| |||| | ||||| |||||| | Sbjct: 278 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 219 Query: 168 ctcttatattagtttacggaggga 191 |||||||||||||||| |||||| Sbjct: 218 gtcttatattagtttacagaggga 195
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 116 ctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttata 175 ||||||||| |||||||| || ||||||||||||||| ||||||| |||||| ||||||| Sbjct: 888 ctctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgttcttata 947 Query: 176 tta 178 ||| Sbjct: 948 tta 950
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 77.8 bits (39), Expect = 3e-11 Identities = 79/93 (84%), Gaps = 7/93 (7%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtg-------ttct 162 ||||||||||||||||||||||||||| ||||||| |||||| ||||| ||| Sbjct: 1026 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaagtct 967 Query: 163 aaatgctcttatattagtttacggagggagtac 195 ||| ||||||||||||||||| ||||||||||| Sbjct: 966 aaacgctcttatattagtttaaggagggagtac 934 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 154 tagtgttctaaatgctcttatattagtttacggagggagtac 195 ||||| |||||| |||||||||||||||||| |||||||||| Sbjct: 986 tagtgatctaaaagctcttatattagtttacagagggagtac 1027 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttaga 144 ||||||||| |||||||||||||||| ||||||| Sbjct: 935 tactccctccttaaactaatataagagcgtttaga 969
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| ||| ||||||||| || |||| ||||||||| | Sbjct: 89547 tactccttctgtaaactaatataacagtatttagattattattttagttttctaaatgtt 89606 Query: 170 cttatattagtttacggagggagta 194 ||||||||||||| | |||||||| Sbjct: 89607 tttatattagtttaagaagggagta 89631 Score = 48.1 bits (24), Expect = 0.026 Identities = 63/76 (82%) Strand = Plus / Minus Query: 121 taaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttatattagt 180 ||||||||||||| | |||||| ||||||||| | ||||||| || |||||||||| Sbjct: 89620 taaactaatataaaaacatttagaaaactaaaataataatctaaatactgttatattagt 89561 Query: 181 ttacggagggagtaca 196 |||| || |||||||| Sbjct: 89560 ttacagaaggagtaca 89545
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| || |||| |||||| | Sbjct: 885 tactccatctgtaaactaatataaaagcgtttagattactaaagtaatgttttaaatgtt 944 Query: 170 cttatatta 178 |||||||| Sbjct: 945 gttatatta 953
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| || ||||||||||||||| || |||| |||||| | Sbjct: 885 tactccatctgtaaactaatataaaagcgtttagattactaaagtaatgttttaaatgtt 944 Query: 170 cttatatta 178 |||||||| Sbjct: 945 gttatatta 953
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| |||||||| |||||||| || ||||||||||||||| ||||||| |||||| | Sbjct: 884 tactccatctgtaaattaatataaaagcgtttagattactaaagtagtgttttaaatgtt 943 Query: 170 cttatatta 178 |||||||| Sbjct: 944 tttatatta 952
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 162 taaatgctcttatattagtttacggagggagtacatttta 201 |||||||||||||||||||||||||||| ||||||||||| Sbjct: 73082 taaatgctcttatattagtttacggaggaagtacatttta 73043
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 158 gttctaaatgctcttatattagtttacggaggga 191 |||||||||||||||||||||||||||||||||| Sbjct: 88569 gttctaaatgctcttatattagtttacggaggga 88536 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagag 136 |||||| ||||||||||||||||| Sbjct: 88536 tccctccgtaaactaatataagag 88559
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 127 aatataagagtgtttagattactaaaatagtgttctaaatgctcttatattagtttac 184 ||||||||||||| ||||| |||||| ||||| |||||| ||||||||||| |||||| Sbjct: 4356 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatttgtttac 4299
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 120 gtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttatattag 179 |||||| |||||||||| ||| |||| ||| || ||||| ||||| ||||||||||| Sbjct: 5021 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 4962 Query: 180 tttacggagggagta 194 ||||||||||||||| Sbjct: 4961 tttacggagggagta 4947
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 120 gtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttatattag 179 |||||| |||||||||| ||| |||| ||| || ||||| ||||| ||||||||||| Sbjct: 4790 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 4731 Query: 180 tttacggagggagta 194 ||||||||||||||| Sbjct: 4730 tttacggagggagta 4716
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 126 taatataagagtgtttagattactaaaatagtgttctaaatgctcttatattagtttacg 185 ||||||||||| |||||||| |||||| || || |||||| | | |||||||||||||| Sbjct: 1769 taatataagagcgtttagataactaaagtaatgatctaaacgtttttatattagtttaca 1710 Query: 186 gagggagtac 195 || ||||||| Sbjct: 1709 gaaggagtac 1700 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||| ||||||||||||||||| | |||||||| | || |||| |||||| ||| Sbjct: 1701 tactccttctgtaaactaatataaaaacgtttagatcattactttagttatctaaacgct 1760 Query: 170 cttatattagtttacggagggagtac 195 ||||||||| || | ||||||||||| Sbjct: 1761 cttatattacttcatggagggagtac 1786
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||| |||| ||||||||||| ||||||| |||| | ||| |||||| ||| Sbjct: 11756 tactccctctataaagaaatataagagtatttagatcactactttggtgatctaaacgct 11697 Query: 170 cttatattagtttacggagggagta 194 | |||||| ||||||||||||||| Sbjct: 11696 catatatttctttacggagggagta 11672
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 |||||||||| |||| ||||||||||| ||||||| |||| | ||| |||||| ||| Sbjct: 14474 tactccctctataaagaaatataagagtatttagatcactactttggtgatctaaacgct 14415 Query: 170 cttatattagtttacggagggagta 194 | |||||| ||||||||||||||| Sbjct: 14414 catatatttctttacggagggagta 14390
>gb|AF347066.1| Triticum aestivum truncated sucrose-phosphate synthase 4 mRNA, partial cds Length = 2642 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 109 ctactccctctgtaaactaatataaga 135 ||||||||||||||||||||||||||| Sbjct: 1448 ctactccctctgtaaactaatataaga 1422 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 161 ctaaatgctcttatattagtttacggagggagta 194 ||||||| |||||||||||||||| ||||||||| Sbjct: 1414 ctaaatgatcttatattagtttacagagggagta 1447
>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1062 Score = 54.0 bits (27), Expect = 4e-04 Identities = 71/86 (82%), Gaps = 6/86 (6%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||| |||||||||| |||||||| |||||| |||||| ||| Sbjct: 805 tactccctctgtaaagaaatataagagcgtttagat------catagtgatctaaacgct 858 Query: 170 cttatattagtttacggagggagtac 195 |||||||| ||||| |||||||||| Sbjct: 859 cttatatttctttacagagggagtac 884 Score = 52.0 bits (26), Expect = 0.002 Identities = 70/85 (82%), Gaps = 6/85 (7%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||| |||||||||| |||||||| |||| || |||||| ||| Sbjct: 883 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 830 Query: 170 cttatattagtttacggagggagta 194 |||||||| ||||| ||||||||| Sbjct: 829 cttatatttctttacagagggagta 805
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattacta 150 |||||||| |||||| ||||||||||| |||||||| |||| Sbjct: 47946 tactccctatgtaaaataatataagagcgtttagatcacta 47986 Score = 44.1 bits (22), Expect = 0.41 Identities = 72/88 (81%), Gaps = 3/88 (3%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaa---tagtgttctaaat 166 |||||||||||| || ||||| |||| |||||||| |||| | ||||| |||||| Sbjct: 48033 tactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaaac 47974 Query: 167 gctcttatattagtttacggagggagta 194 |||||||||||| ||||| |||||||| Sbjct: 47973 gctcttatattattttacatagggagta 47946
>gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full insert mRNA sequence Length = 1768 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 110 tactccctctgtaaactaatataagagtgtttagattacta 150 ||||||||||||| |||||||||||| | ||||||| |||| Sbjct: 437 tactccctctgtagactaatataagactttttagatcacta 397
>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds Length = 9755 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 109 ctactccctctgtaaactaatataagagtgtttagat 145 |||||||||| ||||| ||||||||||||||||||| Sbjct: 7968 ctactccctccgtaaagaaatataagagtgtttagat 8004 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 155 agtgttctaaatgctcttatattagtttacggagggagta 194 |||| |||||| |||||||||| ||||||||||||||| Sbjct: 8008 agtgatctaaacactcttatatttctttacggagggagta 7969
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 160 tctaaatgctcttatattagtttacggagggagtac 195 |||||||||||||||||| |||||| ||| |||||| Sbjct: 117347 tctaaatgctcttatatttgtttacagagagagtac 117382
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 123 aactaatataagagtgtttagattacta 150 |||||||||||||| ||||||||||||| Sbjct: 1992 aactaatataagagcgtttagattacta 1965
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 48.1 bits (24), Expect = 0.026 Identities = 72/88 (81%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagattactaaaatagtgttctaaatgct 169 ||||||||||||||| ||||||||| ||||||| |||| ||||| |||||| | Sbjct: 2259 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 2318 Query: 170 cttatattagtttacggagggagtacat 197 |||||||| | |||||||||||||||| Sbjct: 2319 cttatatttctgtacggagggagtacat 2346
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Minus Query: 120 gtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttatattag 179 |||||| |||||||||| ||| ||| ||| || ||||| ||||| ||||||||||| Sbjct: 7116 gtaaacaaatataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 7057 Query: 180 tttacggaggga 191 |||||||||||| Sbjct: 7056 tttacggaggga 7045
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Minus Query: 120 gtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttatattag 179 |||||| |||||||||| ||| ||| ||| || ||||| ||||| ||||||||||| Sbjct: 6577 gtaaacaaatataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 6518 Query: 180 tttacggaggga 191 |||||||||||| Sbjct: 6517 tttacggaggga 6506
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Minus Query: 120 gtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttatattag 179 |||||| |||||||||| ||| ||| ||| || ||||| ||||| ||||||||||| Sbjct: 7099 gtaaacaaatataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 7040 Query: 180 tttacggaggga 191 |||||||||||| Sbjct: 7039 tttacggaggga 7028
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 48.1 bits (24), Expect = 0.026 Identities = 60/72 (83%) Strand = Plus / Minus Query: 120 gtaaactaatataagagtgtttagattactaaaatagtgttctaaatgctcttatattag 179 |||||| |||||||||| ||| ||| ||| || ||||| ||||| ||||||||||| Sbjct: 73649 gtaaacaaatataagagcgttcggatcactgaagtagtgacctaaacgctcttatatttc 73590 Query: 180 tttacggaggga 191 |||||||||||| Sbjct: 73589 tttacggaggga 73578
>emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein Length = 1841 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 168 ctcttatattagtttacggagggagtac 195 |||||||||||||||||||||| ||||| Sbjct: 630 ctcttatattagtttacggaggaagtac 603 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtt 140 |||| |||| ||||||||||||||||||||| Sbjct: 604 tacttcctccgtaaactaatataagagtgtt 634
>gb|AF458265.1| Triticum aestivum isolate Can3842 rga2 protein (rga2) gene, partial cds Length = 1392 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataaga 135 ||||||||||||||||||||||| Sbjct: 195 tccctctgtaaactaatataaga 217
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 183 acggagggagtacattttaaca 204 |||||||||||||||||||||| Sbjct: 31302323 acggagggagtacattttaaca 31302344
>gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1) gene, complete cds Length = 4971 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 113 tccctctgtaaactaatataagagtgtttagattactaaaatagtg 158 ||||| ||||||| ||||||| || ||||||| |||||||||||| Sbjct: 3032 tccctttgtaaacaaatataatagcatttagatcactaaaatagtg 2987
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 183 acggagggagtacattttaaca 204 |||||||||||||||||||||| Sbjct: 56606 acggagggagtacattttaaca 56627
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 113 tccctctgtaaactaatataagagtgtttagattacta 150 |||||| ||||| ||||||||||||||||||| |||| Sbjct: 71 tccctccgtaaataaatataagagtgtttagatcacta 108
>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence Length = 255501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 actccctctgtaaactaatat 131 ||||||||||||||||||||| Sbjct: 148429 actccctctgtaaactaatat 148409
>gb|AC126047.3| Mus musculus BAC clone RP23-195C14 from X, complete sequence Length = 193191 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 attactaaaatagtgttctaaatgctctt 172 |||||||||||| | |||||||||||||| Sbjct: 63399 attactaaaatacttttctaaatgctctt 63371
>emb|AL358937.16| Human DNA sequence from clone RP11-60I3 on chromosome 9 Contains the 3' end of the NR4A3 gene for nuclear receptor subfamily 4 group A member 3, the STX17 gene for syntaxin 17, the 3' end of the TXNDC4 gene for thioredoxin domain containing 4 (endoplasmic reticulum) (ERP44, ERp44,KIAA0573) and a CpG island, complete sequence Length = 146889 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 ccagggaagaaaccacatgcc 288 ||||||||||||||||||||| Sbjct: 139145 ccagggaagaaaccacatgcc 139125
>gb|AC079199.9| Homo sapiens chromosome 17, clone RP11-94L15, complete sequence Length = 161815 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 9545 ccacatgcccagccttgtgcc 9525
>gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, complete sequence Length = 168585 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 46902 ccacatgcccagccttgtgcc 46882
>emb|CR626867.6| Human DNA sequence from clone XX-HCC1954_8J23, complete sequence Length = 89963 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 7800 ccacatgcccagccttgtgcc 7780
>emb|CR626880.9| Human DNA sequence from clone XX-HCC1954_11K06, complete sequence Length = 151284 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 35928 ccacatgcccagccttgtgcc 35908
>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence Length = 157216 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 95700 ccacatgcccagccttgtgcc 95680
>dbj|AK096328.1| Homo sapiens cDNA FLJ39009 fis, clone NT2RI2025565, highly similar to TELETHONIN Length = 2115 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 915 ccacatgcccagccttgtgcc 895
>dbj|AK148812.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120449I22 product:unclassifiable, full insert sequence Length = 900 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 actccctctgtaaactaatat 131 ||||||||||||||||||||| Sbjct: 286 actccctctgtaaactaatat 266
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tacggagggagtacattttaa 202 ||||||||||||||||||||| Sbjct: 15118476 tacggagggagtacattttaa 15118456
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 acggagggagtacattttaacagct 207 |||||||||||||||||||| |||| Sbjct: 1260504 acggagggagtacattttaaaagct 1260528 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 15656236 acggagggagtacattttaa 15656255
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 acggagggagtacattttaacagct 207 |||||||||||||||||||| |||| Sbjct: 91595 acggagggagtacattttaaaagct 91619
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tacggagggagtacattttaa 202 ||||||||||||||||||||| Sbjct: 12452 tacggagggagtacattttaa 12432
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tacggagggagtacattttaa 202 ||||||||||||||||||||| Sbjct: 110119 tacggagggagtacattttaa 110099
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 acggagggagtacattttaacagct 207 |||||||||||||||||||| |||| Sbjct: 34533 acggagggagtacattttaaaagct 34557
>emb|BX544883.7| Mouse DNA sequence from clone RP23-302B23 on chromosome X, complete sequence Length = 133236 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 attactaaaatagtgttctaaatgctctt 172 |||||||||||| | |||||||||||||| Sbjct: 107854 attactaaaatacttttctaaatgctctt 107826
>emb|AJ010063.1|HSA010063 Homo sapiens telethonin gene Length = 1730 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 271 ccacatgcccagccttgtgcc 251
>emb|AL627079.23| Mouse DNA sequence from clone RP23-138E16 on chromosome 4, complete sequence Length = 146045 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 ccacatgcccagccttgtgcc 300 ||||||||||||||||||||| Sbjct: 6080 ccacatgcccagccttgtgcc 6100
>gb|AY115844.1| Medicago truncatula auxin influx carrier protein (LAX4) gene, complete cds Length = 7228 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 2115 acggagggagtacattttaa 2134
>gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K10, complete sequence Length = 182660 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cagaagtcaaaaagagagca 81 |||||||||||||||||||| Sbjct: 164380 cagaagtcaaaaagagagca 164361
>gb|AC159703.1| Trypanosoma brucei chromosome 8 clone RPCI93-30K1, complete sequence Length = 148802 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagaagtcaaaaagagagca 81 |||||||||||||||||||| Sbjct: 143987 cagaagtcaaaaagagagca 144006
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagaagtcaaaaagagagca 81 |||||||||||||||||||| Sbjct: 1993805 cagaagtcaaaaagagagca 1993824
>gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete sequence Length = 193320 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 tgtaaactaatataagagtgttta 142 |||||||||||| ||||||||||| Sbjct: 105174 tgtaaactaatagaagagtgttta 105151
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09, complete sequence Length = 117443 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 163 aaatgctcttatattagtttacggagggagta 194 |||| |||||||||||| | |||||||||||| Sbjct: 65908 aaatcctcttatattagatgacggagggagta 65877
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 cttatattagtttacggagggagtacatttta 201 |||||||||| ||||||||||||||||||| Sbjct: 112415 cttatattagaagacggagggagtacatttta 112446
>emb|AL672225.15| Mouse DNA sequence from clone RP23-384G1 on chromosome 11 Contains the 5' end of the Spnb2 gene for spectrin beta 2 and a CpG island, complete sequence Length = 172823 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gtcaaaaagagagcatgatt 86 |||||||||||||||||||| Sbjct: 129739 gtcaaaaagagagcatgatt 129720
>gb|AC149134.2| Medicago truncatula, complete sequence Length = 133336 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 100407 acggagggagtacattttaa 100388
>gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1080 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 110 tactccctctgtaaactaatataagagtgtttagat 145 ||||||||||||| | |||||||||| |||||||| Sbjct: 807 tactccctctgtagagaaatataagagcgtttagat 842
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 163 aaatgctcttatattagtttacggagggagta 194 |||| |||||||||||| | |||||||||||| Sbjct: 26178723 aaatcctcttatattagatgacggagggagta 26178692 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 cttatattagtttacggagggagtacatttta 201 |||||||||| ||||||||||||||||||| Sbjct: 21677873 cttatattagaagacggagggagtacatttta 21677904
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 25934429 acggagggagtacattttaa 25934448
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ctcttatattagtttacggagggagtac 195 |||||||||||| |||||||||||||| Sbjct: 24643976 ctcttatattagggtacggagggagtac 24644003 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 20541845 acggagggagtacattttaa 20541826 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 13746651 acggagggagtacattttaa 13746632
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 170 cttatattagtttacggagggagtacat 197 ||||||||||| ||||||||||||||| Sbjct: 6604187 cttatattagtggacggagggagtacat 6604160
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone BACR03B07, complete sequence Length = 170089 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 tgtaaactaatataagagtgttta 142 |||||||||||| ||||||||||| Sbjct: 102836 tgtaaactaatagaagagtgttta 102859
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence Length = 214838 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tactaaaatagtgttctaaa 165 |||||||||||||||||||| Sbjct: 197719 tactaaaatagtgttctaaa 197738
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ctcttatattagtttacggagggagtac 195 |||||||||||| |||||||||||||| Sbjct: 16280 ctcttatattagggtacggagggagtac 16307
>dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0406D01 Length = 163932 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 60720 acggagggagtacattttaa 60701
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 64923 acggagggagtacattttaa 64942
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 45806 acggagggagtacattttaa 45787
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 16217 acggagggagtacattttaa 16198
>dbj|AK072811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143E03, full insert sequence Length = 1888 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 170 cttatattagtttacggagggagtacat 197 ||||||||||| ||||||||||||||| Sbjct: 1143 cttatattagtggacggagggagtacat 1170
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 170 cttatattagtttacggagggagtacat 197 ||||||||||| ||||||||||||||| Sbjct: 116281 cttatattagtggacggagggagtacat 116254
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 tgtaaactaatataagagtgttta 142 |||||||||||| ||||||||||| Sbjct: 64989 tgtaaactaatagaagagtgttta 65012
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 25862605 acggagggagtacattttaa 25862624
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 61296 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acggagggagtacattttaa 202 |||||||||||||||||||| Sbjct: 40860 acggagggagtacattttaa 40841 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,075,897 Number of Sequences: 3902068 Number of extensions: 4075897 Number of successful extensions: 76165 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75144 Number of HSP's gapped (non-prelim): 980 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
