>emb|BX640595.13| Zebrafish DNA sequence from clone CH211-117K11 in linkage group 2,
             complete sequence
          Length = 121429

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 293   gggaacaaaaacaaacaattc 313
             |||||||||||||||||||||
Sbjct: 84507 gggaacaaaaacaaacaattc 84527

>emb|BX601643.6| Zebrafish DNA sequence from clone DKEY-32B18 in linkage group 9,
             complete sequence
          Length = 165857

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   atatataattatgcattcttg 167
             |||||||||||||||||||||
Sbjct: 57243 atatataattatgcattcttg 57263

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 20      gaaaagcaacgagatcatgtaatacaatggcaa 52
               |||||||||||||| ||||| | ||||||||||
Sbjct: 3005488 gaaaagcaacgagaacatgtgacacaatggcaa 3005456

>gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, complete sequence
          Length = 180605

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   aatatataattatgcattctt 166
             |||||||||||||||||||||
Sbjct: 44497 aatatataattatgcattctt 44517

>gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosome 14, complete sequence
          Length = 180177

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    ctgtaaaacaaacagccata 253
              ||||||||||||||||||||
Sbjct: 117782 ctgtaaaacaaacagccata 117763

>gb|AC126053.3| Mus musculus BAC clone RP23-280L21 from chromosome 16, complete sequence
          Length = 217131

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    gtttctgtattttgtgcatt 380
              ||||||||||||||||||||
Sbjct: 127022 gtttctgtattttgtgcatt 127003

>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence
          Length = 195851

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    tacaatatataattatgcat 162
              ||||||||||||||||||||
Sbjct: 123593 tacaatatataattatgcat 123574

>emb|CR387921.7| Zebrafish DNA sequence from clone CH211-84M6 in linkage group 17,
             complete sequence
          Length = 187568

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   aaattttcgaccatcataaa 345
             ||||||||||||||||||||
Sbjct: 25602 aaattttcgaccatcataaa 25621

>emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chromosome 9p23-24.3
             Contains the RLN1 gene for relaxin 1(H1) (RLXH1),the RLN2
             gene for relaxin 2 (H2) (RLXH2), a  high-mobility group
             nucleosomal binding domain 2 (HMGN2) pseudogene, a  novel
             pseudogene, the gene for uncharacterized hematopoietic
             stem/progenitor cells protein (MDS030), a novel pseudogene
             (FLJ39176) and four CpG islands, complete sequence
          Length = 156592

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   aattctcatcatgtgttaaa 328
             ||||||||||||||||||||
Sbjct: 61646 aattctcatcatgtgttaaa 61665

>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15,
              complete sequence
          Length = 147941

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    agagctgccatatacagatc 279
              ||||||||||||||||||||
Sbjct: 117481 agagctgccatatacagatc 117500

>emb|AL138654.1|ATF18P9 Arabidopsis thaliana DNA chromosome 3, BAC clone F18P9
          Length = 95996

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   tattacaatatataattatg 159
             ||||||||||||||||||||
Sbjct: 49883 tattacaatatataattatg 49864

>emb|AL590155.9| Zebrafish DNA sequence from clone RP71-79P20 in linkage group 23 Contains
              part of the putative novel DIRS-1 like retrotransposon
              DIRSDR2 (DIRS-1 Danio rerio 2), the 5' end of a novel gene
              and four CpG islands, complete sequence
          Length = 161731

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    tattacaatatataattatg 159
              ||||||||||||||||||||
Sbjct: 154252 tattacaatatataattatg 154271

>emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in linkage group 2,
             complete sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   atatataattatgcattctt 166
             ||||||||||||||||||||
Sbjct: 89683 atatataattatgcattctt 89664

>dbj|AK134828.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
            enriched library, clone:6330581H02
            product:unclassifiable, full insert sequence
          Length = 2262

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  gtttctgtattttgtgcatt 380
            ||||||||||||||||||||
Sbjct: 1874 gtttctgtattttgtgcatt 1893

>emb|BX511250.8| Zebrafish DNA sequence from clone CH211-57K11 in linkage group 16,
              complete sequence
          Length = 189081

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 144    acaatatataattatgcattcttg 167
              |||||||||||| |||||||||||
Sbjct: 158335 acaatatataatcatgcattcttg 158358

>emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in linkage group 5,
              complete sequence
          Length = 137923

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    tatataattatgcattcttg 167
              ||||||||||||||||||||
Sbjct: 107057 tatataattatgcattcttg 107076

>emb|BX548030.10| Zebrafish DNA sequence from clone CH211-194H8 in linkage group 19,
             complete sequence
          Length = 140638

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   acaatatataattatgcattcttg 167
             |||||||||||| |||||||||||
Sbjct: 69735 acaatatataatcatgcattcttg 69712

>emb|BX005444.14| Zebrafish DNA sequence from clone CH211-119H23 in linkage group 2,
             complete sequence
          Length = 168979

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   atatataattatgcattctt 166
             ||||||||||||||||||||
Sbjct: 71493 atatataattatgcattctt 71512

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     agagctgccatatacagatc 279
               ||||||||||||||||||||
Sbjct: 1273134 agagctgccatatacagatc 1273115

>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  ttcgcacttcaactttctta 221
            ||||||||||||||||||||
Sbjct: 5748 ttcgcacttcaactttctta 5729

>emb|AL954725.9| Zebrafish DNA sequence from clone DKEY-11H11 in linkage group 23,
              complete sequence
          Length = 219971

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    tattacaatatataattatg 159
              ||||||||||||||||||||
Sbjct: 145667 tattacaatatataattatg 145686

>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22,
             complete sequence
          Length = 159207

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ctactattacaatatataat 155
             ||||||||||||||||||||
Sbjct: 19668 ctactattacaatatataat 19649

>gb|AC147267.6| Mus musculus BAC clone RP24-263E13 from chromosome 3, complete
            sequence
          Length = 155979

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  tttctgtattttgtgcattc 381
            ||||||||||||||||||||
Sbjct: 4350 tttctgtattttgtgcattc 4369

>emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on chromosome 13, complete
            sequence
          Length = 144243

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 228  gagatcctgtaaaacaaaca 247
            ||||||||||||||||||||
Sbjct: 1660 gagatcctgtaaaacaaaca 1641

>emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 on chromosome 3,
             complete sequence
          Length = 113400

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    atgtaatacaatggcaatcacaat 59
             |||| |||||||||||||||||||
Sbjct: 81189 atgttatacaatggcaatcacaat 81166

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     agagctgccatatacagatc 279
               ||||||||||||||||||||
Sbjct: 1270855 agagctgccatatacagatc 1270836

>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ctactattacaatatataat 155
             ||||||||||||||||||||
Sbjct: 85008 ctactattacaatatataat 84989

>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 33     atcatgtaatacaatggcaatcac 56
              |||||||||||||||| |||||||
Sbjct: 754597 atcatgtaatacaatgacaatcac 754574


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,588,390
Number of Sequences: 3902068
Number of extensions: 5588390
Number of successful extensions: 145423
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145249
Number of HSP's gapped (non-prelim): 174
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)