>AMPN_ECOLI (P04825) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
            hydrolase)
          Length = 869

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
 Frame = -2

Query: 448  FDMRNPNKVYSLIGGFCGS-PVSFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRW 272
            F M NPN++ SLIG F GS P +FHA+DGSGY FL E++  L+  NPQVASR++    R 
Sbjct: 773  FTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRL 832

Query: 271  RRYDETRQALAKAQLEMIISANGLSENVYEIASKSLA 161
            +RYD  RQ   +A LE +     LS ++YE  +K+LA
Sbjct: 833  KRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA 869

>AMPN_CAUCR (P37893) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
            hydrolase)
          Length = 863

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
 Frame = -2

Query: 448  FDMRNPNKVYSLIGGFCG-SPVSFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRW 272
            F+  NPN++ +L+  F   +P  FH   G+GY FL + +L++D  NP  A+R+V     W
Sbjct: 767  FEPTNPNRLRALVSTFANFNPARFHDPSGAGYAFLADEILKVDAFNPMTAARLVEPLGGW 826

Query: 271  RRYDETRQALAKAQLEMIISANGLSENVYEIASKSL 164
            RRY      L +AQLE I++   LS+NV E+ASK+L
Sbjct: 827  RRYKPELGDLMRAQLERIVAHPNLSKNVLELASKAL 862

>AMPN_HAEIN (P45274) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
            hydrolase)
          Length = 869

 Score = 78.6 bits (192), Expect = 7e-15
 Identities = 38/96 (39%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = -2

Query: 448  FDMRNPNKVYSLIGGFCGSPV-SFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRW 272
            F+  NPN++ SL+G F    + +FH   GSGY+FL +V+++L++ NPQVA+R++    R+
Sbjct: 773  FNFNNPNRLRSLVGSFANHNLKAFHNVSGSGYRFLTDVLIRLNESNPQVAARLIEPLIRF 832

Query: 271  RRYDETRQALAKAQLEMIISANGLSENVYEIASKSL 164
             R+D  RQ L K  LE +     LS++++E   K+L
Sbjct: 833  SRFDAQRQTLMKRALERLSVVENLSKDLFEKIEKAL 868

>AMP1_PLAFQ (O96935) M1-family aminopeptidase (EC 3.4.11.-) (Pfa-M1)|
          Length = 1085

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 28/88 (31%), Positives = 46/88 (52%)
 Frame = -2

Query: 445  DMRNPNKVYSLIGGFCGSPVSFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRWRR 266
            D +NPN + ++   F  +   FH   G GYK + EV+ + DK NP VA+++   F  W +
Sbjct: 989  DSKNPNDIRAVYLPFTNNLRRFHDISGKGYKLIAEVITKTDKFNPMVATQLCEPFKLWNK 1048

Query: 265  YDETRQALAKAQLEMIISANGLSENVYE 182
             D  RQ L   ++  ++    +S N+ E
Sbjct: 1049 LDTKRQELMLNEMNTMLQEPNISNNLKE 1076

>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial precursor (EC|
            2.7.7.6) (MtRPOL)
          Length = 1230

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +1

Query: 25   TIVACYFTHAKYSRIYSVKYTFRALVMVKGSTGRIKFVSLHQETKLPDFSRLSHRHF 195
            T + CY     +  ++   +T  A V V     R +FV LH E  L D SR   + F
Sbjct: 1135 TALHCYRKGLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKRF 1191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,148,333
Number of Sequences: 219361
Number of extensions: 1287080
Number of successful extensions: 3054
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3052
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)