ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK062054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
2ref|XM_483534.1| Oryza sativa (japonica cultivar-group), mRNA 139 9e-30
3ref|XM_483533.1| Oryza sativa (japonica cultivar-group), mRNA 139 9e-30
4ref|XM_483532.1| Oryza sativa (japonica cultivar-group), mRNA 139 9e-30
5dbj|AK102567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
6dbj|AK067265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
7dbj|AK061684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
8dbj|AK100887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
9dbj|AK099654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
10gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
13dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
14dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
15gb|AC134795.10| Mus musculus chromosome 15, clone RP24-456M21, c... 44 0.38
16gb|BC073069.1| Xenopus laevis MGC82731 protein, mRNA (cDNA clone... 44 0.38
17gb|AC183665.2| Pan troglodytes BAC clone CH251-655J2 from chromo... 44 0.38
18emb|CR394546.9| Zebrafish DNA sequence from clone CH211-212I14 i... 44 0.38
19emb|AL512284.20| Human DNA sequence from clone RP11-248M22 on ch... 44 0.38
20gb|AC157582.3| Mus musculus chromosome 15, clone RP24-316F24, co... 44 0.38
21emb|X70881.1|HVMYB3G H.vulgare myb3 gene 44 0.38
22gb|AY175378.1| Branchiostoma belcheri tsingtaunese defensin mRNA... 44 0.38
23gb|AC000066.1|AC000066 Homo sapiens BAC clone CTA-293F11 from 7q... 44 0.38
24emb|AJ010770.1|HSA010770 Homo sapiens hyperion gene, exons 1-50 44 0.38
25gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece 42 1.5
26gb|AC090032.2| Canis familiaris clone RP81-386E20, complete sequ... 42 1.5
27gb|AC090445.3| Canis familiaris clone RP81-55A4, complete sequence 42 1.5
28ref|XM_684173.1| PREDICTED: Danio rerio similar to collagen XIV ... 42 1.5
29gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome... 42 1.5
30gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, comp... 40 6.0
31emb|CR762443.6| Zebrafish DNA sequence from clone DKEY-3A5 in li... 40 6.0
32emb|CR394568.7| Zebrafish DNA sequence from clone CH211-253D5 in... 40 6.0
33gb|AC133076.3| Mus musculus BAC clone RP24-400C14 from chromosom... 40 6.0
34gb|AC125539.4| Mus musculus BAC clone RP23-150M18 from 15, compl... 40 6.0
35emb|AL138698.15| Human DNA sequence from clone RP11-393H6 on chr... 40 6.0
36emb|BX324231.9| Zebrafish DNA sequence from clone DKEY-57H18 in ... 40 6.0
37gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, comp... 40 6.0
38gb|AC113398.3| Homo sapiens chromosome 5 clone RP11-436H11, comp... 40 6.0
39emb|BX530026.5| Zebrafish DNA sequence from clone DKEY-287G12 in... 40 6.0
40emb|BX571981.5| Zebrafish DNA sequence from clone DKEY-31J3 in l... 40 6.0
41emb|BX470199.6| Zebrafish DNA sequence from clone CH211-226M7 in... 40 6.0
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
43gb|U61392.1|PPU61392 Petunia axillaris subsp. parodii F1-ATPase ... 40 6.0
44gb|AC123767.2| Homo sapiens chromosome 8, clone RP11-122L4, comp... 40 6.0
45gb|AC007428.5|AC007428 Homo sapiens, clone RP11-69A1, complete s... 40 6.0
46dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
47dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
48ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 40 6.0
49dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 40 6.0 
>dbj|AK062054.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C02, full
            insert sequence
          Length = 1543

 Score =  145 bits (73), Expect = 1e-31
 Identities = 112/125 (89%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcagttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctc 317
            ||||||||||||||| ||||||||||||||||||||||||||||| || |||  ||||||
Sbjct: 1408 tcagttgcttatgtcgaagtacttgggatcagcagggaagtcgtgctcgacccgcagctc 1349

                                                                        
Query: 318  tccttcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagata 377
             |||||||||||||| ||||| |  |||||||| |||||||||| ||| |||||||||||
Sbjct: 1348 gccttcatctgcatctgagtgtctttgaggaaagacaactctaacatcattgtagagata 1289

                 
Query: 378  gaatc 382
            |||||
Sbjct: 1288 gaatc 1284
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>ref|XM_483534.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3488

 Score =  139 bits (70), Expect = 9e-30
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctctcct 321
            ||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 3279 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccacacgcagctcgcct 3220

                                                                        
Query: 322  tcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatagaat 381
            ||||||||||| |||||||  ||||||||||||||||||||||| || || || ||||||
Sbjct: 3219 tcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtagaat 3160

              
Query: 382  ct 383
            ||
Sbjct: 3159 ct 3158



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  gatgatggatcggatttgca 440
            ||||||||||||||||||||
Sbjct: 3117 gatgatggatcggatttgca 3098
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>ref|XM_483533.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2860

 Score =  139 bits (70), Expect = 9e-30
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctctcct 321
            ||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 2650 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccacacgcagctcgcct 2591

                                                                        
Query: 322  tcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatagaat 381
            ||||||||||| |||||||  ||||||||||||||||||||||| || || || ||||||
Sbjct: 2590 tcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtagaat 2531

              
Query: 382  ct 383
            ||
Sbjct: 2530 ct 2529



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  gatgatggatcggatttgca 440
            ||||||||||||||||||||
Sbjct: 2488 gatgatggatcggatttgca 2469
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>ref|XM_483532.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3006

 Score =  139 bits (70), Expect = 9e-30
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctctcct 321
            ||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 2798 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccacacgcagctcgcct 2739

                                                                        
Query: 322  tcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatagaat 381
            ||||||||||| |||||||  ||||||||||||||||||||||| || || || ||||||
Sbjct: 2738 tcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtagaat 2679

              
Query: 382  ct 383
            ||
Sbjct: 2678 ct 2677



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  gatgatggatcggatttgca 440
            ||||||||||||||||||||
Sbjct: 2636 gatgatggatcggatttgca 2617
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>dbj|AK102567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097K24, full
            insert sequence
          Length = 3006

 Score =  139 bits (70), Expect = 9e-30
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctctcct 321
            ||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 2798 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccacacgcagctcgcct 2739

                                                                        
Query: 322  tcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatagaat 381
            ||||||||||| |||||||  ||||||||||||||||||||||| || || || ||||||
Sbjct: 2738 tcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtagaat 2679

              
Query: 382  ct 383
            ||
Sbjct: 2678 ct 2677



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  gatgatggatcggatttgca 440
            ||||||||||||||||||||
Sbjct: 2636 gatgatggatcggatttgca 2617
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>dbj|AK067265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D09, full
            insert sequence
          Length = 2861

 Score =  139 bits (70), Expect = 9e-30
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctctcct 321
            ||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 2651 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccacacgcagctcgcct 2592

                                                                        
Query: 322  tcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatagaat 381
            ||||||||||| |||||||  ||||||||||||||||||||||| || || || ||||||
Sbjct: 2591 tcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtagaat 2532

              
Query: 382  ct 383
            ||
Sbjct: 2531 ct 2530



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  gatgatggatcggatttgca 440
            ||||||||||||||||||||
Sbjct: 2489 gatgatggatcggatttgca 2470
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>dbj|AK061684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A08, full
            insert sequence
          Length = 1615

 Score =  139 bits (70), Expect = 9e-30
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctctcct 321
            ||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 1405 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccacacgcagctcgcct 1346

                                                                        
Query: 322  tcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatagaat 381
            ||||||||||| |||||||  ||||||||||||||||||||||| || || || ||||||
Sbjct: 1345 tcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtagaat 1286

              
Query: 382  ct 383
            ||
Sbjct: 1285 ct 1284



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  gatgatggatcggatttgca 440
            ||||||||||||||||||||
Sbjct: 1243 gatgatggatcggatttgca 1224
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>dbj|AK100887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128J02, full
            insert sequence
          Length = 2838

 Score =  137 bits (69), Expect = 3e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcagttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctc 317
            ||||||||||||||| ||||||||||||||||||||||||||||| || |||  ||||||
Sbjct: 2703 tcagttgcttatgtcgaagtacttgggatcagcagggaagtcgtgctcgacccgcagctc 2644

                                                                        
Query: 318  tccttcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagata 377
             |||||||| ||||| ||||| |  |||||||| |||||||||| ||| |||||||||||
Sbjct: 2643 gccttcatccgcatctgagtgtctttgaggaaagacaactctaacatcattgtagagata 2584

                 
Query: 378  gaatc 382
            |||||
Sbjct: 2583 gaatc 2579
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>dbj|AK099654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A21, full
            insert sequence
          Length = 3488

 Score =  131 bits (66), Expect = 2e-27
 Identities = 108/122 (88%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccaccttcagctctcct 321
            ||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 3279 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccacacgcagctcgcct 3220

                                                                        
Query: 322  tcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatagaat 381
            ||||| ||||| |||||||  ||||||||||||||||||||||| || || || ||||||
Sbjct: 3219 tcatccgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtagaat 3160

              
Query: 382  ct 383
            ||
Sbjct: 3159 ct 3158



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  gatgatggatcggatttgca 440
            ||||||||||||||||||||
Sbjct: 3117 gatgatggatcggatttgca 3098
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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                          
Query: 258   tcagttgcttatgtcaaagtacttgggatcagcagggaagtcgtg 302
             ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75244 tcagttgcttatgtcgaagtacttgggatcagcagggaagtcgtg 75200



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                         
Query: 319   ccttcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatag 378
             |||||||||||||| ||||| |  |||||||| |||||||||| ||| ||||||||||||
Sbjct: 74848 ccttcatctgcatctgagtgtctttgaggaaagacaactctaacatcattgtagagatag 74789

                 
Query: 379   aatc 382
             ||||
Sbjct: 74788 aatc 74785
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                             
Query: 258      tcagttgcttatgtcaaagtacttgggatcagcagggaagtcgtg 302
                ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 19479837 tcagttgcttatgtcgaagtacttgggatcagcagggaagtcgtg 19479793



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 319      ccttcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatag 378
                |||||||||||||| ||||| |  |||||||| |||||||||| ||| ||||||||||||
Sbjct: 19479441 ccttcatctgcatctgagtgtctttgaggaaagacaactctaacatcattgtagagatag 19479382

                    
Query: 379      aatc 382
                ||||
Sbjct: 19479381 aatc 19479378
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 262      ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccac 308
                ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 26783609 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccac 26783563



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                            
Query: 319      ccttcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatag 378
                |||||||||||||| |||||||  ||||||||||||||||||||||| || || || |||
Sbjct: 26783260 ccttcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtag 26783201

                     
Query: 379      aatct 383
                |||||
Sbjct: 26783200 aatct 26783196



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 421      gatgatggatcggatttgca 440
                ||||||||||||||||||||
Sbjct: 26783155 gatgatggatcggatttgca 26783136



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 104      tacagaaagtaacaactaaa 123
                ||||||||||||||||||||
Sbjct: 24667811 tacagaaagtaacaactaaa 24667792
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>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0033D24
          Length = 186132

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                             
Query: 262    ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccac 308
              ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 126951 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccac 126905



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                          
Query: 319    ccttcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatag 378
              |||||||||||||| |||||||  ||||||||||||||||||||||| || || || |||
Sbjct: 126602 ccttcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtag 126543

                   
Query: 379    aatct 383
              |||||
Sbjct: 126542 aatct 126538



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    gatgatggatcggatttgca 440
              ||||||||||||||||||||
Sbjct: 126497 gatgatggatcggatttgca 126478
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>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0665C04
          Length = 177054

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                            
Query: 262   ttgcttatgtcaaagtacttgggatcagcagggaagtcgtgttccac 308
             ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 46399 ttgcttatgtcgaagtacttgggatcagcagggaagtcatgttccac 46353



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                         
Query: 319   ccttcatctgcatccgagtgccgctgaggaaatacaactctaagatcgttgtagagatag 378
             |||||||||||||| |||||||  ||||||||||||||||||||||| || || || |||
Sbjct: 46050 ccttcatctgcatctgagtgcctttgaggaaatacaactctaagatcattataaaggtag 45991

                  
Query: 379   aatct 383
             |||||
Sbjct: 45990 aatct 45986



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   gatgatggatcggatttgca 440
             ||||||||||||||||||||
Sbjct: 45945 gatgatggatcggatttgca 45926
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>gb|AC134795.10| Mus musculus chromosome 15, clone RP24-456M21, complete sequence
          Length = 166650

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 89    agccagaagcagaaatacagaa 110
             ||||||||||||||||||||||
Sbjct: 91580 agccagaagcagaaatacagaa 91559
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>gb|BC073069.1| Xenopus laevis MGC82731 protein, mRNA (cDNA clone MGC:82731
            IMAGE:5155666), complete cds
          Length = 2557

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 142  gataaaagctgtacattttggg 163
            ||||||||||||||||||||||
Sbjct: 1801 gataaaagctgtacattttggg 1780
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>gb|AC183665.2| Pan troglodytes BAC clone CH251-655J2 from chromosome unknown, complete
              sequence
          Length = 194692

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 129    cattttattggaagataaaagctgtacatt 158
              ||||||||| ||||||||||||| ||||||
Sbjct: 125072 cattttatttgaagataaaagctttacatt 125043
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>emb|CR394546.9| Zebrafish DNA sequence from clone CH211-212I14 in linkage group 16,
             complete sequence
          Length = 174132

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 244   gcaaaagcaatttttcagttgcttat 269
             |||||||||||||||||||| |||||
Sbjct: 52324 gcaaaagcaatttttcagttccttat 52299
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>emb|AL512284.20| Human DNA sequence from clone RP11-248M22 on chromosome 10 Contains
             part of the gene for CamKI-like protein kinase (CKLiK)
             (LOC221042 LOC283070) and two CpG islands, complete
             sequence
          Length = 113920

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 242   cagcaaaagcaatttttcagtt 263
             ||||||||||||||||||||||
Sbjct: 84954 cagcaaaagcaatttttcagtt 84933
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>gb|AC157582.3| Mus musculus chromosome 15, clone RP24-316F24, complete sequence
          Length = 207168

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 89    agccagaagcagaaatacagaa 110
             ||||||||||||||||||||||
Sbjct: 29891 agccagaagcagaaatacagaa 29912
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>emb|X70881.1|HVMYB3G H.vulgare myb3 gene
          Length = 3241

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 17  ttactgttcatccaagctcatttgag 42
           ||||||||||| ||||||||||||||
Sbjct: 705 ttactgttcattcaagctcatttgag 680
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>gb|AY175378.1| Branchiostoma belcheri tsingtaunese defensin mRNA, complete cds
          Length = 594

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 330 atccgagtgccgctgaggaaat 351
           ||||||||||||||||||||||
Sbjct: 25  atccgagtgccgctgaggaaat 4
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>gb|AC000066.1|AC000066 Homo sapiens BAC clone CTA-293F11 from 7q21-7q22, complete sequence
          Length = 94960

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 129   cattttattggaagataaaagctgtacatt 158
             ||||||||| ||||||||||||| ||||||
Sbjct: 85492 cattttatttgaagataaaagctttacatt 85463
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>emb|AJ010770.1|HSA010770 Homo sapiens hyperion gene, exons 1-50
          Length = 170008

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 129   cattttattggaagataaaagctgtacatt 158
             ||||||||| ||||||||||||| ||||||
Sbjct: 99601 cattttatttgaagataaaagctttacatt 99572
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>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece
          Length = 120562

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 16    tttactgttcatccaagctcatttgagct 44
             ||||||||||| |||||||||||||||||
Sbjct: 32738 tttactgttca-ccaagctcatttgagct 32765
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>gb|AC090032.2| Canis familiaris clone RP81-386E20, complete sequence
          Length = 197836

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 90   gccagaagcagaaatacagaa 110
            |||||||||||||||||||||
Sbjct: 1467 gccagaagcagaaatacagaa 1447
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>gb|AC090445.3| Canis familiaris clone RP81-55A4, complete sequence
          Length = 163762

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     gccagaagcagaaatacagaa 110
              |||||||||||||||||||||
Sbjct: 155179 gccagaagcagaaatacagaa 155159
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>ref|XM_684173.1| PREDICTED: Danio rerio similar to collagen XIV (LOC560776), partial
           mRNA
          Length = 1420

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 304 tccaccttcagctctccttcatctg 328
           |||||||||||||||| ||||||||
Sbjct: 914 tccaccttcagctctctttcatctg 890
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>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence
          Length = 172103

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 369   gtagagatagaatctcctatc 389
             |||||||||||||||||||||
Sbjct: 75535 gtagagatagaatctcctatc 75515
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>gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, complete sequence
          Length = 157064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    tttgaaagccagaagcagaaatac 106
             ||||||||||||||||| ||||||
Sbjct: 67516 tttgaaagccagaagcacaaatac 67539
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>emb|CR762443.6| Zebrafish DNA sequence from clone DKEY-3A5 in linkage group 10, complete
              sequence
          Length = 213185

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     ctgttcatccaagctcatttgagc 43
              |||||||||||| |||||||||||
Sbjct: 206296 ctgttcatccaaactcatttgagc 206319
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>emb|CR394568.7| Zebrafish DNA sequence from clone CH211-253D5 in linkage group 21,
             complete sequence
          Length = 131341

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   aactaaatgatgcattttat 136
             ||||||||||||||||||||
Sbjct: 74371 aactaaatgatgcattttat 74352
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>gb|AC133076.3| Mus musculus BAC clone RP24-400C14 from chromosome 15, complete sequence
          Length = 200588

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     agaagcagaaatacagaaag 112
              ||||||||||||||||||||
Sbjct: 151517 agaagcagaaatacagaaag 151498
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>gb|AC125539.4| Mus musculus BAC clone RP23-150M18 from 15, complete sequence
          Length = 204453

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    agaagcagaaatacagaaag 112
             ||||||||||||||||||||
Sbjct: 17197 agaagcagaaatacagaaag 17178
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>emb|AL138698.15| Human DNA sequence from clone RP11-393H6 on chromosome 13q21.33-22.3
             Contains part of the DACH gene for dachshund homolog
             (Drosophila) (DACH1 FLJ10138), a H3 histone family
             pseudogene and a ribosomal protein L21 (RPL21) pseudogene,
             complete sequence
          Length = 102371

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    tgagcttgggtgtagaatagcact 62
             |||||||| |||||||||||||||
Sbjct: 87418 tgagcttgtgtgtagaatagcact 87441
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>emb|BX324231.9| Zebrafish DNA sequence from clone DKEY-57H18 in linkage group 12,
             complete sequence
          Length = 17804

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    aaagccagaagcagaaatac 106
             ||||||||||||||||||||
Sbjct: 17704 aaagccagaagcagaaatac 17685
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>gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, complete sequence
          Length = 129469

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   tgatgcattttattggaagataaa 147
             |||||||||||||||||| |||||
Sbjct: 36901 tgatgcattttattggaacataaa 36924
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>gb|AC113398.3| Homo sapiens chromosome 5 clone RP11-436H11, complete sequence
          Length = 172613

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 84     ttgaaagccagaagcagaaatacagaaa 111
              ||||||||||||||| | ||||||||||
Sbjct: 103378 ttgaaagccagaagctgcaatacagaaa 103351
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>emb|BX530026.5| Zebrafish DNA sequence from clone DKEY-287G12 in linkage group 12,
              complete sequence
          Length = 190980

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aaagccagaagcagaaatac 106
              ||||||||||||||||||||
Sbjct: 189077 aaagccagaagcagaaatac 189096
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>emb|BX571981.5| Zebrafish DNA sequence from clone DKEY-31J3 in linkage group 14, complete
              sequence
          Length = 258091

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ctaaatgatgcattttattg 138
              ||||||||||||||||||||
Sbjct: 115205 ctaaatgatgcattttattg 115186
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>emb|BX470199.6| Zebrafish DNA sequence from clone CH211-226M7 in linkage group 11,
              complete sequence
          Length = 197146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    actaaatgatgcattttatt 137
              ||||||||||||||||||||
Sbjct: 146115 actaaatgatgcattttatt 146134
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 175      aattagtgagaataaatatg 194
                ||||||||||||||||||||
Sbjct: 16157937 aattagtgagaataaatatg 16157956
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>gb|U61392.1|PPU61392 Petunia axillaris subsp. parodii F1-ATPase alpha subunit (atpA-1)
            gene, complete cds; mitochondrial gene for mitochondrial
            product
          Length = 2438

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  agtacttgggatcagcaggg 294
            ||||||||||||||||||||
Sbjct: 2193 agtacttgggatcagcaggg 2212
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>gb|AC123767.2| Homo sapiens chromosome 8, clone RP11-122L4, complete sequence
          Length = 154078

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   tgatgcattttattggaagataaa 147
             |||||||||||||||||| |||||
Sbjct: 39482 tgatgcattttattggaacataaa 39459
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>gb|AC007428.5|AC007428 Homo sapiens, clone RP11-69A1, complete sequence
          Length = 156180

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    tgagcttgggtgtagaatagcact 62
             |||||||| |||||||||||||||
Sbjct: 62664 tgagcttgtgtgtagaatagcact 62687
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>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0038F09
          Length = 166568

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    aattagtgagaataaatatg 194
              ||||||||||||||||||||
Sbjct: 128270 aattagtgagaataaatatg 128289
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   tacagaaagtaacaactaaa 123
             ||||||||||||||||||||
Sbjct: 40115 tacagaaagtaacaactaaa 40096
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    acagcaaaagcaatttttca 260
              ||||||||||||||||||||
Sbjct: 765865 acagcaaaagcaatttttca 765846
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>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete
              sequence, 4 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    acagcaaaagcaatttttca 260
              ||||||||||||||||||||
Sbjct: 165865 acagcaaaagcaatttttca 165846


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,622,455
Number of Sequences: 3902068
Number of extensions: 4622455
Number of successful extensions: 99992
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 99807
Number of HSP's gapped (non-prelim): 186
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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