>SCD5_YEAST (P34758) Protein SCD5 (Protein FTB1)|
          Length = 872

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +1

Query: 16  TVNKKVRFEDSNKS*LNHIQTGGVSVPYPTMQQHYVSHLLA----FPDPTTRQIIVKTSH 183
           T +  VR  + N   +  ++  G   P  T+ QH  SHLL+     P     Q+I   + 
Sbjct: 568 TYSNNVRINNGNIVSMPKVEITGAFPPQNTLPQHQQSHLLSPQNTIPQHQRSQLISPQNT 627

Query: 184 FNTGRPTMQPQ 216
           F   +P + PQ
Sbjct: 628 FTQNQPILSPQ 638

>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 255 VPLSLFLHLGFTYLRLHGRAPCIKVTCLHYNL--PSRWIWKSKQMGYVVLLHSG 100
           V L L L LG T L  HG+    +V+C+H  L  P+   WK  ++  + + H+G
Sbjct: 5   VDLRLLLLLGATALLTHGQEDIPEVSCIHNGLRVPNGETWK-PEVCLICICHNG 57

>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 255 VPLSLFLHLGFTYLRLHGRAPCIKVTCLHYNL--PSRWIWKSKQMGYVVLLHSG 100
           V L L L LG T L  HG+    +V+C+H  L  P+   WK   +  + + H+G
Sbjct: 5   VDLRLLLLLGATALLTHGQEDIPEVSCIHNGLRVPNGETWK-PDVCLICICHNG 57

>LPXB_BLOFL (Q7VRD3) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 384

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -2

Query: 249 LSLFLHLGFT--YLRLHGRAPCIKVTCLHYNLPSRWIWKSKQM 127
           L++F+ + F    + L  R     +T +HY  PS W W+S ++
Sbjct: 91  LNIFIGIDFPDFNISLEKRLKKYGITTIHYVSPSIWAWRSNRV 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,939,742
Number of Sequences: 219361
Number of extensions: 831155
Number of successful extensions: 1896
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)