ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YNAC_BACSU (P94481) Hypothetical protein ynaC 28 6.2

>YNAC_BACSU (P94481) Hypothetical protein ynaC|
          Length = 263

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 106 VKSCMSSTVITHPPSLVLSIYCTYNRHHHELSLSTSSF 219
           VK  +     T+P S++LS YC YNR++  +S +   F
Sbjct: 24  VKKTLQEKYGTNPDSIILSDYC-YNRYNKGISFNKHLF 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,859,326
Number of Sequences: 219361
Number of extensions: 618620
Number of successful extensions: 2136
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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