ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 44 0.21
2gb|AC103408.8| Mus musculus chromosome 3, clone RP23-442M1, comp... 44 0.21
3gb|DQ265410.1| Plasmodium falciparum isolate Pf1548_56 RIFIN (ri... 44 0.21
4gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome... 42 0.84
5gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosom... 42 0.84
6emb|AL450407.14| Human DNA sequence from clone RP5-1160J2 on chr... 42 0.84
7dbj|AK137916.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 42 0.84
8gb|AC017037.10|AC017037 Homo sapiens BAC clone RP11-312A15 from ... 42 0.84
9emb|AL805906.7| Mouse DNA sequence from clone RP23-113J20 on chr... 42 0.84
10emb|AL671854.14| Mouse DNA sequence from clone RP23-89M15 on chr... 42 0.84
11emb|AL596062.13| Mouse DNA sequence from clone RP23-284O21 on ch... 42 0.84
12gb|AC115727.10| Mus musculus chromosome 3, clone RP23-30A13, com... 40 3.3
13gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.3
14gb|BC025548.1| Mus musculus solute carrier family 44, member 3, ... 40 3.3
15gb|BC010552.1| Mus musculus solute carrier family 44, member 3, ... 40 3.3
16gb|AC152065.4| Mus musculus BAC clone RP23-16D9 from chromosome ... 40 3.3
17gb|U28730.1| Caenorhabditis elegans cosmid K10B2, complete sequence 40 3.3
18gb|AC102540.7| Mus musculus chromosome 3, clone RP23-98H24, comp... 40 3.3
19gb|AC136455.3| Mus musculus BAC clone RP24-481H2 from chromosome... 40 3.3
20gb|AC095825.6| Rattus norvegicus 4 BAC CH230-9J6 (Children's Hos... 40 3.3
21gb|AC164536.5| Mus musculus chromosome 18, clone RP23-425H1, com... 40 3.3
22gb|AC114539.8| Mus musculus chromosome 19, clone RP23-62I23, com... 40 3.3
23gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, co... 40 3.3
24gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, com... 40 3.3
25gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, co... 40 3.3
26emb|CT030300.1| Xenopus tropicalis finished cDNA, clone TEgg015o09 40 3.3
27gb|BC026385.1| Mus musculus RIKEN cDNA 4930538D17 gene, mRNA (cD... 40 3.3
28emb|Z13985.1|MMCONREG M.musculus control region sequence DNA 40 3.3
29emb|Z49126.1|CEDH11 Caenorhabditis elegans Cosmid DH11, complete... 40 3.3
30gb|AC122266.2| Mus musculus BAC clone RP23-213K18 from 8, comple... 40 3.3
31gb|AC131751.2| Mus musculus BAC clone RP23-19P8 from 10, complet... 40 3.3
32gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, co... 40 3.3
33gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome... 40 3.3
34emb|AL365273.25| Human DNA sequence from clone RP11-429G19 on ch... 40 3.3
35gb|AC098641.3| Genomic sequence for Mus musculus, clone RP23-258... 40 3.3
36emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A... 40 3.3
37emb|AL078596.8|HSDJ429G5 Human DNA sequence from clone RP3-429G5... 40 3.3
38gb|AC105336.14| Mus musculus chromosome 3, clone RP24-277J22, co... 40 3.3
39gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome... 40 3.3
40gb|AC163344.2| Mus musculus BAC clone RP24-66I20 from chromosome... 40 3.3
41emb|BX511263.7| Zebrafish DNA sequence from clone DKEY-204K5 in ... 40 3.3
42gb|AC107015.6| Homo sapiens 3 BAC RP11-124D9 (Roswell Park Cance... 40 3.3
43gb|AC157522.2| Pan troglodytes BAC clone CH251-520I13 from chrom... 40 3.3
44gb|AF447584.1|AF447584 Jatropha curcas UDP-glycosyltransfersase ... 40 3.3
45ref|NM_145394.1| Mus musculus solute carrier family 44, member 3... 40 3.3
46gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosom... 40 3.3
47gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome... 40 3.3
48gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9... 40 3.3
49gb|AF391757.1|AF391757 Mus musculus homeodomain protein RINX (Ri... 40 3.3
50gb|AC157514.2| Mus musculus BAC clone RP24-281C16 from chromosom... 40 3.3
51dbj|AK015425.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 3.3
52ref|NM_062884.3| Caenorhabditis elegans abnormal cell LINeage fa... 40 3.3
53gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Canc... 40 3.3
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
55dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
56dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
57gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome... 40 3.3
58gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell ... 40 3.3
59gb|AF275253.1|AF275253 Caenorhabditis elegans LIN-23 (lin-23) mR... 40 3.3
60gb|AC108697.3| Homo sapiens 3 BAC RP11-8N23 (Roswell Park Cancer... 40 3.3
61dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
62dbj|AP005674.5| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
63emb|BX323557.8| Zebrafish DNA sequence from clone DKEYP-86B9 in ... 40 3.3
64emb|BX072549.4| Zebrafish DNA sequence from clone CH211-114A17 i... 40 3.3
65emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chro... 40 3.3
66gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, comple... 40 3.3
67emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 i... 40 3.3
68dbj|AP004398.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
69gb|AC102562.13| Mus musculus chromosome 18, clone RP23-205H1, co... 40 3.3
70gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, comple... 40 3.3
71gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple... 40 3.3
72gb|AC126669.4| Mus musculus BAC clone RP24-457D15 from 9, comple... 40 3.3
73gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complet... 40 3.3
74emb|AL672293.14| Mouse DNA sequence from clone RP23-180D16 on ch... 40 3.3
75emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chr... 40 3.3
76emb|AL833781.5| Mouse DNA sequence from clone RP23-447J12 on chr... 40 3.3
77gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.3
78emb|AL807250.9| Mouse DNA sequence from clone RP23-99K18 on chro... 40 3.3 
>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4
          Length = 272698

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     aaagatgaagcacatttattaa 22
             ||||||||||||||||||||||
Sbjct: 55270 aaagatgaagcacatttattaa 55291
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>gb|AC103408.8| Mus musculus chromosome 3, clone RP23-442M1, complete sequence
          Length = 187860

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 109    aaatcatgcatgtcttctacag 130
              ||||||||||||||||||||||
Sbjct: 173518 aaatcatgcatgtcttctacag 173497
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>gb|DQ265410.1| Plasmodium falciparum isolate Pf1548_56 RIFIN (rif) pseudogene,
           partial sequence
          Length = 1118

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   aaagatgaagcacatttattaa 22
           ||||||||||||||||||||||
Sbjct: 716 aaagatgaagcacatttattaa 695
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>gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome 7, complete sequence
          Length = 186561

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     tcatataaacaaacaaacaac 102
              |||||||||||||||||||||
Sbjct: 159036 tcatataaacaaacaaacaac 159056
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>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence
          Length = 190325

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     tcatataaacaaacaaacaac 102
              |||||||||||||||||||||
Sbjct: 174790 tcatataaacaaacaaacaac 174770
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>emb|AL450407.14| Human DNA sequence from clone RP5-1160J2 on chromosome 1 Contains the
            5' end of the gene for a novel protein, complete sequence
          Length = 18106

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 50   taaagaaacctctccaagtta 70
            |||||||||||||||||||||
Sbjct: 9264 taaagaaacctctccaagtta 9244
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>dbj|AK137916.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130039C22
           product:unclassifiable, full insert sequence
          Length = 1018

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 ttggttctctccatctactgt 171
           |||||||||||||||||||||
Sbjct: 500 ttggttctctccatctactgt 520
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>gb|AC017037.10|AC017037 Homo sapiens BAC clone RP11-312A15 from 4, complete sequence
          Length = 186106

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    ttcatatcatataaacaaaca 96
             |||||||||||||||||||||
Sbjct: 66822 ttcatatcatataaacaaaca 66842
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>emb|AL805906.7| Mouse DNA sequence from clone RP23-113J20 on chromosome 4, complete
              sequence
          Length = 176416

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     atcatataaacaaacaaacaa 101
              |||||||||||||||||||||
Sbjct: 149264 atcatataaacaaacaaacaa 149284
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>emb|AL671854.14| Mouse DNA sequence from clone RP23-89M15 on chromosome 3, complete
              sequence
          Length = 207265

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     tcatataaacaaacaaacaac 102
              |||||||||||||||||||||
Sbjct: 100875 tcatataaacaaacaaacaac 100855
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>emb|AL596062.13| Mouse DNA sequence from clone RP23-284O21 on chromosome 11, complete
             sequence
          Length = 155151

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   ttggttctctccatctactgt 171
             |||||||||||||||||||||
Sbjct: 89769 ttggttctctccatctactgt 89789
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>gb|AC115727.10| Mus musculus chromosome 3, clone RP23-30A13, complete sequence
          Length = 183826

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 1176 tcatataaacaaacaaacaa 1157
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>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01,
              complete sequence
          Length = 122768

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     atatcatataaacaaacaaa 98
              ||||||||||||||||||||
Sbjct: 105761 atatcatataaacaaacaaa 105742
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>gb|BC025548.1| Mus musculus solute carrier family 44, member 3, mRNA (cDNA clone
            MGC:38127 IMAGE:5320841), complete cds
          Length = 2572

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 2348 tcatataaacaaacaaacaa 2367
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>gb|BC010552.1| Mus musculus solute carrier family 44, member 3, mRNA (cDNA clone
            MGC:7894 IMAGE:3582543), complete cds
          Length = 2342

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 2118 tcatataaacaaacaaacaa 2137
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>gb|AC152065.4| Mus musculus BAC clone RP23-16D9 from chromosome 12, complete sequence
          Length = 226392

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 166789 tcatataaacaaacaaacaa 166808
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>gb|U28730.1| Caenorhabditis elegans cosmid K10B2, complete sequence
          Length = 17344

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   atgcatgtcttctacagtaa 133
             ||||||||||||||||||||
Sbjct: 15369 atgcatgtcttctacagtaa 15388
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>gb|AC102540.7| Mus musculus chromosome 3, clone RP23-98H24, complete sequence
          Length = 207497

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 102473 tcatataaacaaacaaacaa 102454
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>gb|AC136455.3| Mus musculus BAC clone RP24-481H2 from chromosome 6, complete sequence
          Length = 166458

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 40709 tcatataaacaaacaaacaa 40690
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>gb|AC095825.6| Rattus norvegicus 4 BAC CH230-9J6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 234084

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     caccactactaaagaaacct 60
              ||||||||||||||||||||
Sbjct: 145550 caccactactaaagaaacct 145531
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>gb|AC164536.5| Mus musculus chromosome 18, clone RP23-425H1, complete sequence
          Length = 188835

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 9339 tcatataaacaaacaaacaa 9320
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>gb|AC114539.8| Mus musculus chromosome 19, clone RP23-62I23, complete sequence
          Length = 249767

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 136434 tcatataaacaaacaaacaa 136415
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>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence
          Length = 186155

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    catataaacaaacaaacaac 102
             ||||||||||||||||||||
Sbjct: 82960 catataaacaaacaaacaac 82979
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>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence
          Length = 162020

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     catataaacaaacaaacaac 102
              ||||||||||||||||||||
Sbjct: 135832 catataaacaaacaaacaac 135851
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>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence
          Length = 200663

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 200176 tcatataaacaaacaaacaa 200195
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>emb|CT030300.1| Xenopus tropicalis finished cDNA, clone TEgg015o09
          Length = 2020

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   atatcatataaacaaacaaacaac 102
            ||||||||||| ||||||||||||
Sbjct: 1517 atatcatataagcaaacaaacaac 1494
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>gb|BC026385.1| Mus musculus RIKEN cDNA 4930538D17 gene, mRNA (cDNA clone
           IMAGE:4187305), with apparent retained intron
          Length = 2251

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  tcatataaacaaacaaacaa 101
           ||||||||||||||||||||
Sbjct: 37  tcatataaacaaacaaacaa 18
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>emb|Z13985.1|MMCONREG M.musculus control region sequence DNA
          Length = 12600

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 5084 tcatataaacaaacaaacaa 5103
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>emb|Z49126.1|CEDH11 Caenorhabditis elegans Cosmid DH11, complete sequence
          Length = 35770

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 88   aaacaaacaaacaacggtgtcaaa 111
            |||||||||||||| |||||||||
Sbjct: 9834 aaacaaacaaacaaaggtgtcaaa 9857
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>gb|AC122266.2| Mus musculus BAC clone RP23-213K18 from 8, complete sequence
          Length = 195246

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 97208 tcatataaacaaacaaacaa 97189
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>gb|AC131751.2| Mus musculus BAC clone RP23-19P8 from 10, complete sequence
          Length = 185680

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    catatcatataaacaaacaaacaa 101
             ||||||| ||||||||||||||||
Sbjct: 60755 catatcaaataaacaaacaaacaa 60778
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>gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, complete sequence
          Length = 235814

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 26858 tcatataaacaaacaaacaa 26877
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>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence
          Length = 201185

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 152901 tcatataaacaaacaaacaa 152920
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>emb|AL365273.25| Human DNA sequence from clone RP11-429G19 on chromosome 10 Contains
            the 3' end of the ENTPD1 gene for ectonucleoside
            triphosphate diphosphohydrolase 1, a novel gene, the 3'
            end of two novel genes (FLJ34077, FLJ39150), complete
            sequence
          Length = 191942

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 8117 tcatataaacaaacaaacaa 8098
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>gb|AC098641.3| Genomic sequence for Mus musculus, clone RP23-258H17, from chromosome
             17, complete sequence
          Length = 78373

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 53287 tcatataaacaaacaaacaa 53306
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>emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A18 on chromosome 1p13.2-21.1
            Contains a keratin 18 (KRT18) pseudogene, the 3' end of
            the RAP1A gene for RAP1A member of RAS oncogene family,
            three novel genes, the DDX20 gene for DEAD
            (Asp-Glu-Ala-Asp) box polypeptide 20, the 3' end of the
            KCND3 gene for potassium voltage-gated channel
            Shal-related subfamily member 3 and two CpG islands,
            complete sequence
          Length = 128379

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 127  acagtaattacccatcccccttct 150
            ||||||||| ||||||||||||||
Sbjct: 8429 acagtaattccccatcccccttct 8452
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>emb|AL078596.8|HSDJ429G5 Human DNA sequence from clone RP3-429G5 on chromosome 6q21-22.1
            Contains the 3' end of a novel gene, the NR2E1 gene for
            nuclear receptor subfamily 2 group E, the 3' end of the
            SNX3 gene for sorting nexin 3 and four CpG islands,
            complete sequence
          Length = 64183

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 7213 tcatataaacaaacaaacaa 7232
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>gb|AC105336.14| Mus musculus chromosome 3, clone RP24-277J22, complete sequence
          Length = 176399

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 152863 tcatataaacaaacaaacaa 152844
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>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence
          Length = 181828

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 174215 tcatataaacaaacaaacaa 174196
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>gb|AC163344.2| Mus musculus BAC clone RP24-66I20 from chromosome 9, complete sequence
          Length = 221000

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 157145 tcatataaacaaacaaacaa 157126
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>emb|BX511263.7| Zebrafish DNA sequence from clone DKEY-204K5 in linkage group 17,
              complete sequence
          Length = 178207

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    ggtgtcaaatcatgcatgtcttct 126
              |||| |||||||||||||||||||
Sbjct: 107135 ggtgccaaatcatgcatgtcttct 107112
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>gb|AC107015.6| Homo sapiens 3 BAC RP11-124D9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156277

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    atatcatataaacaaacaaa 98
             ||||||||||||||||||||
Sbjct: 69422 atatcatataaacaaacaaa 69403
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>gb|AC157522.2| Pan troglodytes BAC clone CH251-520I13 from chromosome unknown, complete
              sequence
          Length = 221631

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 142122 tcatataaacaaacaaacaa 142103
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>gb|AF447584.1|AF447584 Jatropha curcas UDP-glycosyltransfersase mRNA, partial cds
          Length = 1040

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 atcccccttctttggttctctcca 163
           |||||| |||||||||||||||||
Sbjct: 802 atcccctttctttggttctctcca 779
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>ref|NM_145394.1| Mus musculus solute carrier family 44, member 3 (Slc44a3), mRNA
          Length = 2572

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 2348 tcatataaacaaacaaacaa 2367
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>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence
          Length = 213468

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 149467 tcatataaacaaacaaacaa 149486
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>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence
          Length = 220437

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    catataaacaaacaaacaac 102
             ||||||||||||||||||||
Sbjct: 36398 catataaacaaacaaacaac 36379
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>gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9, complete sequence
          Length = 185444

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    catataaacaaacaaacaac 102
             ||||||||||||||||||||
Sbjct: 98994 catataaacaaacaaacaac 98975
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>gb|AF391757.1|AF391757 Mus musculus homeodomain protein RINX (Rinx) gene, complete cds
          Length = 16315

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   catataaacaaacaaacaac 102
            ||||||||||||||||||||
Sbjct: 4326 catataaacaaacaaacaac 4307
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>gb|AC157514.2| Mus musculus BAC clone RP24-281C16 from chromosome 9, complete sequence
          Length = 191880

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 152767 tcatataaacaaacaaacaa 152786
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>dbj|AK015425.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930449A08 product:unclassifiable, full
            insert sequence
          Length = 1672

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   tcatataaacaaacaaacaa 101
            ||||||||||||||||||||
Sbjct: 1047 tcatataaacaaacaaacaa 1066
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>ref|NM_062884.3| Caenorhabditis elegans abnormal cell LINeage family member (lin-23)
           (lin-23) mRNA, complete cds
          Length = 2636

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 atgcatgtcttctacagtaa 133
           ||||||||||||||||||||
Sbjct: 555 atgcatgtcttctacagtaa 574
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>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 214029

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 168794 tcatataaacaaacaaacaa 168775
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 79       atatcatataaacaaacaaa 98
                ||||||||||||||||||||
Sbjct: 11192141 atatcatataaacaaacaaa 11192160
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      atatcatataaacaaacaaa 98
               ||||||||||||||||||||
Sbjct: 1150150 atatcatataaacaaacaaa 1150131
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      atatcatataaacaaacaaa 98
               ||||||||||||||||||||
Sbjct: 9498568 atatcatataaacaaacaaa 9498549
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>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete
            sequence
          Length = 203909

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 78   catatcatataaacaaacaaacaa 101
            ||||||| ||||||||||||||||
Sbjct: 5943 catatcaaataaacaaacaaacaa 5920
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>gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168134

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 108941 tcatataaacaaacaaacaa 108960
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>gb|AF275253.1|AF275253 Caenorhabditis elegans LIN-23 (lin-23) mRNA, complete cds
          Length = 2700

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 atgcatgtcttctacagtaa 133
           ||||||||||||||||||||
Sbjct: 562 atgcatgtcttctacagtaa 581
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>gb|AC108697.3| Homo sapiens 3 BAC RP11-8N23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163737

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     atatcatataaacaaacaaa 98
              ||||||||||||||||||||
Sbjct: 153895 atatcatataaacaaacaaa 153876
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>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0424A08
          Length = 151294

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    atatcatataaacaaacaaa 98
             ||||||||||||||||||||
Sbjct: 31997 atatcatataaacaaacaaa 31978
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>dbj|AP005674.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:B1126F07
          Length = 125007

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   atatcatataaacaaacaaa 98
            ||||||||||||||||||||
Sbjct: 6119 atatcatataaacaaacaaa 6138
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>emb|BX323557.8| Zebrafish DNA sequence from clone DKEYP-86B9 in linkage group 5,
             complete sequence
          Length = 223754

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   tccatctactgtacatacaa 179
             ||||||||||||||||||||
Sbjct: 10447 tccatctactgtacatacaa 10466
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>emb|BX072549.4| Zebrafish DNA sequence from clone CH211-114A17 in linkage group 5,
             complete sequence
          Length = 167182

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   tccatctactgtacatacaa 179
             ||||||||||||||||||||
Sbjct: 42248 tccatctactgtacatacaa 42267
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>emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chromosome 2, complete
             sequence
          Length = 206478

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 19762 tcatataaacaaacaaacaa 19781
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>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence
          Length = 158312

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 23232 tcatataaacaaacaaacaa 23251
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>emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 in linkage group 19,
             complete sequence
          Length = 55374

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 40462 tcatataaacaaacaaacaa 40481
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>dbj|AP004398.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0438G07
          Length = 138878

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    atatcatataaacaaacaaa 98
             ||||||||||||||||||||
Sbjct: 32117 atatcatataaacaaacaaa 32136
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>gb|AC102562.13| Mus musculus chromosome 18, clone RP23-205H1, complete sequence
          Length = 210975

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 35889 tcatataaacaaacaaacaa 35908
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>gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, complete sequence
          Length = 181064

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 27716 tcatataaacaaacaaacaa 27697
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>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 143962 tcatataaacaaacaaacaa 143943
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>gb|AC126669.4| Mus musculus BAC clone RP24-457D15 from 9, complete sequence
          Length = 180081

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    catataaacaaacaaacaac 102
             ||||||||||||||||||||
Sbjct: 20074 catataaacaaacaaacaac 20055
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>gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complete sequence
          Length = 214318

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tcatataaacaaacaaacaa 101
              ||||||||||||||||||||
Sbjct: 189299 tcatataaacaaacaaacaa 189280
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>emb|AL672293.14| Mouse DNA sequence from clone RP23-180D16 on chromosome X, complete
             sequence
          Length = 177087

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 80812 tcatataaacaaacaaacaa 80831
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>emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chromosome 2, complete
              sequence
          Length = 216475

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     catataaacaaacaaacaac 102
              ||||||||||||||||||||
Sbjct: 134486 catataaacaaacaaacaac 134505
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>emb|AL833781.5| Mouse DNA sequence from clone RP23-447J12 on chromosome 4, complete
             sequence
          Length = 165700

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 98463 tcatataaacaaacaaacaa 98482
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>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OJ1729_E02, complete sequence
          Length = 90509

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  atatcatataaacaaacaaa 98
           ||||||||||||||||||||
Sbjct: 436 atatcatataaacaaacaaa 417
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>emb|AL807250.9| Mouse DNA sequence from clone RP23-99K18 on chromosome X, complete
             sequence
          Length = 141025

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcatataaacaaacaaacaa 101
             ||||||||||||||||||||
Sbjct: 47114 tcatataaacaaacaaacaa 47133


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,608,918
Number of Sequences: 3902068
Number of extensions: 3608918
Number of successful extensions: 673118
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 671896
Number of HSP's gapped (non-prelim): 1222
length of query: 257
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 235
effective length of database: 17,147,199,772
effective search space: 4029591946420
effective search space used: 4029591946420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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